RNA–Protein interactions for RNA: ENST00000398776.1

CAPN11-201, Transcript of calpain 11, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN11, Length 2,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN11-201ENST00000398776 CCDC173Q0VFZ6 552 aa12.35□□□□□ -0.43
CAPN11-201ENST00000398776 ZRANB1Q9UGI0 708 aa12.35□□□□□ -0.43
CAPN11-201ENST00000398776 TRIM27P14373 513 aa12.34□□□□□ -0.43
CAPN11-201ENST00000398776 PHACTR3Q96KR7 559 aa12.34□□□□□ -0.43
CAPN11-201ENST00000398776 TTC21AQ8NDW8 1320 aa12.34□□□□□ -0.43
CAPN11-201ENST00000398776 PIK3R4Q99570 1358 aa12.34□□□□□ -0.43
CAPN11-201ENST00000398776 HMOX1P09601 288 aa12.33□□□□□ -0.44
CAPN11-201ENST00000398776 ZNF853P0CG23 659 aa12.33□□□□□ -0.44
CAPN11-201ENST00000398776 GAS2L3Q86XJ1 694 aa12.33□□□□□ -0.44
CAPN11-201ENST00000398776 AMOTL2Q9Y2J4 779 aa12.33□□□□□ -0.44
CAPN11-201ENST00000398776 NCLP19338 710 aaKnown RBP12.33□□□□□ -0.44
CAPN11-201ENST00000398776 HSCBQ8IWL3 235 aa12.33□□□□□ -0.44
CAPN11-201ENST00000398776 SLC26A8Q96RN1 970 aa12.32□□□□□ -0.44
CAPN11-201ENST00000398776 RGPD1P0DJD0 1748 aa12.32□□□□□ -0.44
CAPN11-201ENST00000398776 HDAC1Q13547 482 aaPredicted RBP12.32□□□□□ -0.44
CAPN11-201ENST00000398776 RRS1Q15050 365 aaKnown RBP12.32□□□□□ -0.44
CAPN11-201ENST00000398776 ARHGAP45Q92619 1136 aa12.32□□□□□ -0.44
CAPN11-201ENST00000398776 NOB1Q9ULX3 412 aaKnown RBP12.32□□□□□ -0.44
CAPN11-201ENST00000398776 ANKARQ7Z5J8 1434 aa12.32□□□□□ -0.44
CAPN11-201ENST00000398776 PTMSP20962 102 aa12.31□□□□□ -0.44
CAPN11-201ENST00000398776 SKOR2Q2VWA4 1001 aaPredicted RBP12.31□□□□□ -0.44
CAPN11-201ENST00000398776 DMTNQ08495 405 aa12.31□□□□□ -0.44
CAPN11-201ENST00000398776 HS1BP3Q53T59 392 aa12.31□□□□□ -0.44
CAPN11-201ENST00000398776 CFAP44Q96MT7 982 aa12.31□□□□□ -0.44
CAPN11-201ENST00000398776 CHMP4BQ9H444 224 aaKnown RBP12.31□□□□□ -0.44
CAPN11-201ENST00000398776 FMN2Q9NZ56 1722 aa12.3□□□□□ -0.44
CAPN11-201ENST00000398776 CEP170BQ9Y4F5 1589 aaPredicted RBP12.3□□□□□ -0.44
CAPN11-201ENST00000398776 PEAK1Q9H792 1746 aa12.3□□□□□ -0.44
CAPN11-201ENST00000398776 DYNC1I1O14576 645 aa12.3□□□□□ -0.44
CAPN11-201ENST00000398776 VAMP4O75379 141 aa12.3□□□□□ -0.44
CAPN11-201ENST00000398776 TNPO1Q92973 898 aaKnown RBP12.3□□□□□ -0.44
CAPN11-201ENST00000398776 USP54Q70EL1 1684 aa12.29□□□□□ -0.44
CAPN11-201ENST00000398776 RGPD8O14715 1765 aaPredicted RBP12.29□□□□□ -0.44
CAPN11-201ENST00000398776 EIF4A2Q14240 407 aaKnown RBP12.29□□□□□ -0.44
CAPN11-201ENST00000398776 DDIT3P35638 169 aa12.29□□□□□ -0.44
CAPN11-201ENST00000398776 ITPRIPQ8IWB1 547 aa12.29□□□□□ -0.44
CAPN11-201ENST00000398776 ZBTB40Q9NUA8 1239 aa12.29□□□□□ -0.44
CAPN11-201ENST00000398776 FAM13BQ9NYF5 915 aa12.29□□□□□ -0.44
CAPN11-201ENST00000398776 ZNF500O60304 480 aaPredicted RBP12.28□□□□□ -0.44
CAPN11-201ENST00000398776 NCOA3Q9Y6Q9 1424 aa12.28□□□□□ -0.44
CAPN11-201ENST00000398776 MSNP26038 577 aaKnown RBP12.28□□□□□ -0.44
CAPN11-201ENST00000398776 HAP1P54257 671 aaPredicted RBP12.28□□□□□ -0.44
CAPN11-201ENST00000398776 TMEM57Q8N5G2 664 aa12.28□□□□□ -0.44
CAPN11-201ENST00000398776 MBIPQ9NS73 344 aa12.28□□□□□ -0.44
CAPN11-201ENST00000398776 FOXD4L1Q9NU39 408 aa12.28□□□□□ -0.44
CAPN11-201ENST00000398776 MRPL50Q8N5N7 158 aaKnown RBP12.27□□□□□ -0.44
CAPN11-201ENST00000398776 ARHGEF10O15013 1369 aa12.27□□□□□ -0.45
CAPN11-201ENST00000398776 ZNF142P52746 1687 aaPredicted RBP12.27□□□□□ -0.45
CAPN11-201ENST00000398776 KIF24Q5T7B8 1368 aa12.27□□□□□ -0.45
CAPN11-201ENST00000398776 SMC5Q8IY18 1101 aa12.26□□□□□ -0.45
CAPN11-201ENST00000398776 GBP4Q96PP9 640 aa12.26□□□□□ -0.45
CAPN11-201ENST00000398776 SBNO1A3KN83 1393 aa12.26□□□□□ -0.45
CAPN11-201ENST00000398776 IBTKQ9P2D0 1353 aaPredicted RBP12.26□□□□□ -0.45
CAPN11-201ENST00000398776 PIK3C2AO00443 1686 aa12.26□□□□□ -0.45
CAPN11-201ENST00000398776 FLT4P35916 1363 aa12.26□□□□□ -0.45
CAPN11-201ENST00000398776 CHD2O14647 1828 aaKnown RBP12.25□□□□□ -0.45
CAPN11-201ENST00000398776 HSP90AB1P08238 724 aaKnown RBP12.25□□□□□ -0.45
CAPN11-201ENST00000398776 TWISTNBQ3B726 338 aaPredicted RBP12.25□□□□□ -0.45
CAPN11-201ENST00000398776 SULT6B1Q6IMI4 303 aa12.25□□□□□ -0.45
CAPN11-201ENST00000398776 THUMPD2Q9BTF0 503 aaKnown RBP12.25□□□□□ -0.45
CAPN11-201ENST00000398776 CIZ1Q9ULV3 898 aaPredicted RBP12.25□□□□□ -0.45
CAPN11-201ENST00000398776 R3HCC1Q9Y3T6 440 aaKnown RBP12.25□□□□□ -0.45
CAPN11-201ENST00000398776 NASPP49321 788 aaPredicted RBP12.25□□□□□ -0.45
CAPN11-201ENST00000398776 ANP32BQ92688 251 aaKnown RBP12.25□□□□□ -0.45
CAPN11-201ENST00000398776 UQCRHLA0A096LP55 91 aa12.24□□□□□ -0.45
CAPN11-201ENST00000398776 NUTM2FA1L443 756 aa12.24□□□□□ -0.45
CAPN11-201ENST00000398776 UQCRHP07919 91 aa12.24□□□□□ -0.45
CAPN11-201ENST00000398776 NGDNQ8NEJ9 315 aaKnown RBP12.24□□□□□ -0.45
CAPN11-201ENST00000398776 CCDC94Q9BW85 323 aaPredicted RBP12.24□□□□□ -0.45
CAPN11-201ENST00000398776 ZSCAN20P17040 1043 aaPredicted RBP12.24□□□□□ -0.45
CAPN11-201ENST00000398776 ARID3AQ99856 593 aa12.24□□□□□ -0.45
CAPN11-201ENST00000398776 NOL7Q9UMY1 257 aaKnown RBP12.24□□□□□ -0.45
CAPN11-201ENST00000398776 KDRP35968 1356 aa12.24□□□□□ -0.45
CAPN11-201ENST00000398776 KIAA0232Q92628 1395 aa12.24□□□□□ -0.45
CAPN11-201ENST00000398776 ABCC4O15439 1325 aa12.24□□□□□ -0.45
CAPN11-201ENST00000398776 CSPP1Q1MSJ5 1256 aa12.24□□□□□ -0.45
CAPN11-201ENST00000398776 HSP90AB2PQ58FF8 381 aa12.24□□□□□ -0.45
CAPN11-201ENST00000398776 TSPYL6Q8N831 410 aa12.24□□□□□ -0.45
CAPN11-201ENST00000398776 GTPBP4Q9BZE4 634 aaKnown RBP12.24□□□□□ -0.45
CAPN11-201ENST00000398776 SETD1BQ9UPS6 1966 aaKnown RBP12.23□□□□□ -0.45
CAPN11-201ENST00000398776 MAP3K19Q56UN5 1328 aa12.23□□□□□ -0.45
CAPN11-201ENST00000398776 GTF2E1P29083 439 aaPredicted RBP12.23□□□□□ -0.45
CAPN11-201ENST00000398776 BBXQ8WY36 941 aaPredicted RBP12.23□□□□□ -0.45
CAPN11-201ENST00000398776 API5Q9BZZ5 524 aaKnown RBP12.23□□□□□ -0.45
CAPN11-201ENST00000398776 ZHX1Q9UKY1 873 aaPredicted RBP12.23□□□□□ -0.45
CAPN11-201ENST00000398776 CHL1O00533 1208 aa12.23□□□□□ -0.45
CAPN11-201ENST00000398776 ZBTB7BO15156 539 aaPredicted RBP12.23□□□□□ -0.45
CAPN11-201ENST00000398776 KIF20AO95235 890 aa12.23□□□□□ -0.45
CAPN11-201ENST00000398776 AEBP1Q8IUX7 1158 aa12.23□□□□□ -0.45
CAPN11-201ENST00000398776 MARF1Q9Y4F3 1742 aaKnown RBP12.23□□□□□ -0.45
CAPN11-201ENST00000398776 FAM83GA6ND36 823 aa12.22□□□□□ -0.45
CAPN11-201ENST00000398776 KCNA6P17658 529 aa12.22□□□□□ -0.45
CAPN11-201ENST00000398776 MCM5P33992 734 aa12.22□□□□□ -0.45
CAPN11-201ENST00000398776 C8orf58Q8NAV2 365 aa12.22□□□□□ -0.45
CAPN11-201ENST00000398776 RAB3GAP1Q15042 981 aa12.21□□□□□ -0.45
CAPN11-201ENST00000398776 ANKLE2Q86XL3 938 aa12.21□□□□□ -0.46
CAPN11-201ENST00000398776 SNX21Q969T3 373 aa12.21□□□□□ -0.46
CAPN11-201ENST00000398776 IGSF1Q8N6C5 1336 aa12.21□□□□□ -0.46
CAPN11-201ENST00000398776 SASS6Q6UVJ0 657 aa12.2□□□□□ -0.46
CAPN11-201ENST00000398776 BCL11BQ9C0K0 894 aaPredicted RBP12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms