RNA–Protein interactions for RNA: ENST00000397238.6

AGAP3-202, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,225 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-202ENST00000397238 GLI2P10070 1586 aa24.25■■□□□ 1.47
AGAP3-202ENST00000397238 WAPLQ7Z5K2 1190 aa24.25■■□□□ 1.47
AGAP3-202ENST00000397238 CWC22Q9HCG8 908 aaKnown RBP24.25■■□□□ 1.47
AGAP3-202ENST00000397238 ZKSCAN5Q9Y2L8 839 aa24.25■■□□□ 1.47
AGAP3-202ENST00000397238 MED14O60244 1454 aa24.24■■□□□ 1.47
AGAP3-202ENST00000397238 BRPF1P55201 1214 aaPredicted RBP24.24■■□□□ 1.47
AGAP3-202ENST00000397238 LRSAM1Q6UWE0 723 aa24.24■■□□□ 1.47
AGAP3-202ENST00000397238 ESF1Q9H501 851 aaKnown RBP24.23■■□□□ 1.47
AGAP3-202ENST00000397238 MEIS3Q99687 375 aa24.23■■□□□ 1.47
AGAP3-202ENST00000397238 USP32Q8NFA0 1604 aa24.23■■□□□ 1.47
AGAP3-202ENST00000397238 DIP2CQ9Y2E4 1556 aa24.22■■□□□ 1.47
AGAP3-202ENST00000397238 JARID2Q92833 1246 aaPredicted RBP24.22■■□□□ 1.47
AGAP3-202ENST00000397238 ZNF830Q96NB3 372 aaPredicted RBP24.22■■□□□ 1.47
AGAP3-202ENST00000397238 ZC3H13Q5T200 1668 aaKnown RBP24.22■■□□□ 1.47
AGAP3-202ENST00000397238 NME9Q86XW9 330 aa24.22■■□□□ 1.47
AGAP3-202ENST00000397238 CFAP44Q96MT7 982 aa24.22■■□□□ 1.47
AGAP3-202ENST00000397238 REC8O95072 547 aa24.22■■□□□ 1.47
AGAP3-202ENST00000397238 PDLIM2Q96JY6 352 aa24.22■■□□□ 1.47
AGAP3-202ENST00000397238 NEURL4Q96JN8 1562 aa24.21■■□□□ 1.47
AGAP3-202ENST00000397238 LRRC7Q96NW7 1537 aa24.21■■□□□ 1.47
AGAP3-202ENST00000397238 PRDM10Q9NQV6 1147 aa24.21■■□□□ 1.47
AGAP3-202ENST00000397238 ZNF500O60304 480 aaPredicted RBP24.2■■□□□ 1.47
AGAP3-202ENST00000397238 PTCH1Q13635 1447 aa24.2■■□□□ 1.46
AGAP3-202ENST00000397238 CEP85Q6P2H3 762 aa24.2■■□□□ 1.46
AGAP3-202ENST00000397238 ANKRD44Q8N8A2 993 aa24.2■■□□□ 1.46
AGAP3-202ENST00000397238 TMX3Q96JJ7 454 aa24.2■■□□□ 1.46
AGAP3-202ENST00000397238 ERC2O15083 957 aa24.2■■□□□ 1.46
AGAP3-202ENST00000397238 SIGLEC1Q9BZZ2 1709 aa24.2■■□□□ 1.46
AGAP3-202ENST00000397238 TSPOAP1O95153 1857 aa24.19■■□□□ 1.46
AGAP3-202ENST00000397238 PLCB2Q00722 1185 aa24.19■■□□□ 1.46
AGAP3-202ENST00000397238 TSC1Q92574 1164 aa24.19■■□□□ 1.46
AGAP3-202ENST00000397238 MIS18AQ9NYP9 233 aa24.19■■□□□ 1.46
AGAP3-202ENST00000397238 HS1BP3Q53T59 392 aa24.18■■□□□ 1.46
AGAP3-202ENST00000397238 CCDC39Q9UFE4 941 aa24.18■■□□□ 1.46
AGAP3-202ENST00000397238 CAMSAP1Q5T5Y3 1602 aa24.18■■□□□ 1.46
AGAP3-202ENST00000397238 MCM10Q7L590 875 aa24.18■■□□□ 1.46
AGAP3-202ENST00000397238 RILPL2Q969X0 211 aa24.18■■□□□ 1.46
AGAP3-202ENST00000397238 PNPLA6Q8IY17 1366 aa24.18■■□□□ 1.46
AGAP3-202ENST00000397238 SOX12O15370 315 aa24.18■■□□□ 1.46
AGAP3-202ENST00000397238 FAM135BQ49AJ0 1406 aa24.17■■□□□ 1.46
AGAP3-202ENST00000397238 PPLO60437 1756 aa24.17■■□□□ 1.46
AGAP3-202ENST00000397238 ZNF853P0CG23 659 aa24.17■■□□□ 1.46
AGAP3-202ENST00000397238 UPF3BQ9BZI7 483 aaKnown RBP24.17■■□□□ 1.46
AGAP3-202ENST00000397238 EXOC6BQ9Y2D4 811 aa24.17■■□□□ 1.46
AGAP3-202ENST00000397238 PIK3R4Q99570 1358 aa24.17■■□□□ 1.46
AGAP3-202ENST00000397238 TRIM6-TRIM34B2RNG4 842 aa24.16■■□□□ 1.46
AGAP3-202ENST00000397238 F6X3S4 739 aa24.16■■□□□ 1.46
AGAP3-202ENST00000397238 ANO2Q9NQ90 1003 aa24.16■■□□□ 1.46
AGAP3-202ENST00000397238 DTNBO60941 627 aa24.15■■□□□ 1.46
AGAP3-202ENST00000397238 IL13P35225 146 aa24.15■■□□□ 1.46
AGAP3-202ENST00000397238 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.15■■□□□ 1.46
AGAP3-202ENST00000397238 NCKAP5LQ9HCH0 1330 aa24.15■■□□□ 1.46
AGAP3-202ENST00000397238 FAM177BA6PVY3 158 aa24.14■■□□□ 1.46
AGAP3-202ENST00000397238 AEBP1Q8IUX7 1158 aa24.14■■□□□ 1.46
AGAP3-202ENST00000397238 RPAP2Q8IXW5 612 aaPredicted RBP24.14■■□□□ 1.46
AGAP3-202ENST00000397238 CSPP1Q1MSJ5 1256 aa24.14■■□□□ 1.45
AGAP3-202ENST00000397238 C17orf53Q8N3J3 647 aaPredicted RBP24.14■■□□□ 1.45
AGAP3-202ENST00000397238 TSPY26PQ9H489 355 aa24.14■■□□□ 1.45
AGAP3-202ENST00000397238 GADD45BO75293 160 aaPredicted RBP24.14■■□□□ 1.45
AGAP3-202ENST00000397238 PALD1Q9ULE6 856 aa24.14■■□□□ 1.45
AGAP3-202ENST00000397238 SLC4A2P04920 1241 aa24.13■■□□□ 1.45
AGAP3-202ENST00000397238 CD163L1Q9NR16 1453 aa24.13■■□□□ 1.45
AGAP3-202ENST00000397238 MSH6P52701 1360 aa24.13■■□□□ 1.45
AGAP3-202ENST00000397238 LARP6Q9BRS8 491 aaKnown RBP24.12■■□□□ 1.45
AGAP3-202ENST00000397238 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP24.12■■□□□ 1.451e-5■□□□□ 10.5
AGAP3-202ENST00000397238 NUTM2FA1L443 756 aa24.12■■□□□ 1.45
AGAP3-202ENST00000397238 LMOD3Q0VAK6 560 aa24.12■■□□□ 1.45
AGAP3-202ENST00000397238 ARHGEF28Q8N1W1 1705 aaKnown RBP24.12■■□□□ 1.45
AGAP3-202ENST00000397238 YTHDC2Q9H6S0 1430 aaKnown RBP24.11■■□□□ 1.45
AGAP3-202ENST00000397238 NEXMIFQ5QGS0 1516 aa24.11■■□□□ 1.45
AGAP3-202ENST00000397238 MBD3O95983 291 aa24.11■■□□□ 1.45
AGAP3-202ENST00000397238 TERF1P54274 439 aa24.1■■□□□ 1.45
AGAP3-202ENST00000397238 SASS6Q6UVJ0 657 aa24.1■■□□□ 1.45
AGAP3-202ENST00000397238 TXNDC2Q86VQ3 553 aa24.1■■□□□ 1.45
AGAP3-202ENST00000397238 PDE1AP54750 535 aa24.1■■□□□ 1.45
AGAP3-202ENST00000397238 SULT6B1Q6IMI4 303 aa24.1■■□□□ 1.45
AGAP3-202ENST00000397238 NECTIN2Q92692 538 aa24.1■■□□□ 1.45
AGAP3-202ENST00000397238 USP25Q9UHP3 1055 aa24.1■■□□□ 1.45
AGAP3-202ENST00000397238 KIAA2012Q0VF49 1180 aa24.09■■□□□ 1.45
AGAP3-202ENST00000397238 MAP7D2Q96T17 732 aa24.08■■□□□ 1.45
AGAP3-202ENST00000397238 TTC12Q9H892 705 aaPredicted RBP24.08■■□□□ 1.44
AGAP3-202ENST00000397238 RTL1A6NKG5 1358 aa24.07■■□□□ 1.44
AGAP3-202ENST00000397238 DYNC1I1O14576 645 aa24.07■■□□□ 1.44
AGAP3-202ENST00000397238 G2E3Q7L622 706 aa24.06■■□□□ 1.44
AGAP3-202ENST00000397238 COG3Q96JB2 828 aa24.06■■□□□ 1.44
AGAP3-202ENST00000397238 ARHGAP31Q2M1Z3 1444 aa24.06■■□□□ 1.44
AGAP3-202ENST00000397238 RIMS2Q9UQ26 1411 aa24.06■■□□□ 1.44
AGAP3-202ENST00000397238 BRD1O95696 1058 aa24.06■■□□□ 1.44
AGAP3-202ENST00000397238 USP48Q86UV5 1035 aa24.06■■□□□ 1.44
AGAP3-202ENST00000397238 PIK3C2BO00750 1634 aa24.06■■□□□ 1.44
AGAP3-202ENST00000397238 RICTORQ6R327 1708 aa24.06■■□□□ 1.44
AGAP3-202ENST00000397238 ZFYVE9O95405 1425 aa24.06■■□□□ 1.44
AGAP3-202ENST00000397238 HMMRO75330 724 aa24.06■■□□□ 1.44
AGAP3-202ENST00000397238 MAP4K4O95819 1239 aaPredicted RBP24.05■■□□□ 1.44
AGAP3-202ENST00000397238 MCCP23508 829 aa24.05■■□□□ 1.44
AGAP3-202ENST00000397238 SYAP1Q96A49 352 aaPredicted RBP24.05■■□□□ 1.44
AGAP3-202ENST00000397238 ATP10DQ9P241 1426 aa24.04■■□□□ 1.44
AGAP3-202ENST00000397238 ZHX1Q9UKY1 873 aaPredicted RBP24.04■■□□□ 1.44
AGAP3-202ENST00000397238 MCM5P33992 734 aa24.03■■□□□ 1.44
AGAP3-202ENST00000397238 ESYT1Q9BSJ8 1104 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms