RNA–Protein interactions for RNA: ENST00000397013.2

NUP98-206, Transcript of nucleoporin 98, humanhuman

TSL 5

Gene NUP98, Length 939 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-206ENST00000397013 NINLQ9Y2I6 1382 aa11.57□□□□□ -0.56
NUP98-206ENST00000397013 EXOC5O00471 708 aa11.57□□□□□ -0.56
NUP98-206ENST00000397013 SLC15A2Q16348 729 aa11.57□□□□□ -0.56
NUP98-206ENST00000397013 CARD10Q9BWT7 1032 aa11.57□□□□□ -0.56
NUP98-206ENST00000397013 FHDC1Q9C0D6 1143 aaPredicted RBP11.57□□□□□ -0.56
NUP98-206ENST00000397013 ITSN1Q15811 1721 aa11.57□□□□□ -0.56
NUP98-206ENST00000397013 CD44P16070 742 aaKnown RBP11.56□□□□□ -0.56
NUP98-206ENST00000397013 ZNF784Q8NCA9 323 aaPredicted RBP11.56□□□□□ -0.56
NUP98-206ENST00000397013 SYT17Q9BSW7 474 aa11.56□□□□□ -0.56
NUP98-206ENST00000397013 STK32BQ9NY57 414 aa11.56□□□□□ -0.56
NUP98-206ENST00000397013 SLIT3O75094 1523 aa11.55□□□□□ -0.56
NUP98-206ENST00000397013 C11orf95C9JLR9 678 aaPredicted RBP11.55□□□□□ -0.56
NUP98-206ENST00000397013 KIF12Q96FN5 646 aa11.55□□□□□ -0.56
NUP98-206ENST00000397013 PARP4Q9UKK3 1724 aaKnown RBP11.55□□□□□ -0.56
NUP98-206ENST00000397013 CPSF1Q10570 1443 aaKnown RBP11.54□□□□□ -0.56
NUP98-206ENST00000397013 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.54□□□□□ -0.56
NUP98-206ENST00000397013 STK24Q9Y6E0 443 aa11.54□□□□□ -0.56
NUP98-206ENST00000397013 EVC2Q86UK5 1308 aa11.54□□□□□ -0.56
NUP98-206ENST00000397013 COL18A1P39060 1754 aa11.54□□□□□ -0.56
NUP98-206ENST00000397013 BRD4O60885 1362 aaPredicted RBP11.54□□□□□ -0.56
NUP98-206ENST00000397013 LRRC37A3O60309 1634 aa11.53□□□□□ -0.56
NUP98-206ENST00000397013 KCNQ4P56696 695 aa11.53□□□□□ -0.56
NUP98-206ENST00000397013 NEUROD1Q13562 356 aa11.53□□□□□ -0.56
NUP98-206ENST00000397013 ZNF827Q17R98 1081 aa11.53□□□□□ -0.56
NUP98-206ENST00000397013 NME9Q86XW9 330 aa11.53□□□□□ -0.56
NUP98-206ENST00000397013 KCNH5Q8NCM2 988 aa11.53□□□□□ -0.56
NUP98-206ENST00000397013 CDCA7Q9BWT1 371 aaPredicted RBP11.53□□□□□ -0.56
NUP98-206ENST00000397013 LRRC4BQ9NT99 713 aa11.53□□□□□ -0.56
NUP98-206ENST00000397013 PCDHB13Q9Y5F0 798 aa11.53□□□□□ -0.56
NUP98-206ENST00000397013 C19orf67A6NJJ6 358 aa11.52□□□□□ -0.57
NUP98-206ENST00000397013 NKX1-1Q15270 411 aaPredicted RBP11.52□□□□□ -0.57
NUP98-206ENST00000397013 NLRP2Q9NX02 1062 aa11.52□□□□□ -0.57
NUP98-206ENST00000397013 PIK3C2AO00443 1686 aa11.52□□□□□ -0.57
NUP98-206ENST00000397013 BCL9O00512 1426 aa11.52□□□□□ -0.57
NUP98-206ENST00000397013 ARXQ96QS3 562 aa11.51□□□□□ -0.57
NUP98-206ENST00000397013 MTFR1LQ9H019 292 aa11.51□□□□□ -0.57
NUP98-206ENST00000397013 PCDHB8Q9UN66 801 aa11.51□□□□□ -0.57
NUP98-206ENST00000397013 CASZ1Q86V15 1759 aa11.51□□□□□ -0.57
NUP98-206ENST00000397013 MAP3K13O43283 966 aa11.5□□□□□ -0.57
NUP98-206ENST00000397013 FBLN1P23142 703 aa11.5□□□□□ -0.57
NUP98-206ENST00000397013 KTN1Q86UP2 1357 aaKnown RBP11.5□□□□□ -0.57
NUP98-206ENST00000397013 MYOM1P52179 1685 aa11.49□□□□□ -0.57
NUP98-206ENST00000397013 GTPBP6O43824 516 aaPredicted RBP11.49□□□□□ -0.57
NUP98-206ENST00000397013 PSEN1P49768 467 aa11.49□□□□□ -0.57
NUP98-206ENST00000397013 ANKRD24Q8TF21 1146 aa11.49□□□□□ -0.57
NUP98-206ENST00000397013 SLC12A5Q9H2X9 1139 aa11.49□□□□□ -0.57
NUP98-206ENST00000397013 TTC21AQ8NDW8 1320 aa11.49□□□□□ -0.57
NUP98-206ENST00000397013 KIAA1210Q9ULL0 1709 aa11.49□□□□□ -0.57
NUP98-206ENST00000397013 SBF2Q86WG5 1849 aa11.49□□□□□ -0.57
NUP98-206ENST00000397013 IFNL1Q8IU54 200 aa11.48□□□□□ -0.57
NUP98-206ENST00000397013 DDX54Q8TDD1 881 aaKnown RBP11.48□□□□□ -0.57
NUP98-206ENST00000397013 TMC1Q8TDI8 760 aa11.48□□□□□ -0.57
NUP98-206ENST00000397013 LTV1Q96GA3 475 aaPredicted RBP11.48□□□□□ -0.57
NUP98-206ENST00000397013 NFAT5O94916 1531 aa11.48□□□□□ -0.57
NUP98-206ENST00000397013 GOLGB1Q14789 3259 aaKnown RBP11.48□□□□□ -0.57
NUP98-206ENST00000397013 QRICH2Q9H0J4 1663 aa11.47□□□□□ -0.57
NUP98-206ENST00000397013 ROCK2O75116 1388 aaKnown RBP11.47□□□□□ -0.57
NUP98-206ENST00000397013 CCDC7Q96M83 1385 aa11.47□□□□□ -0.57
NUP98-206ENST00000397013 ERBB3P21860 1342 aa11.47□□□□□ -0.57
NUP98-206ENST00000397013 IL2RBP14784 551 aa11.47□□□□□ -0.57
NUP98-206ENST00000397013 SENP3-EIF4A1A0A087X0R7 540 aa11.46□□□□□ -0.57
NUP98-206ENST00000397013 TNS2Q63HR2 1409 aa11.45□□□□□ -0.58
NUP98-206ENST00000397013 USP31Q70CQ4 1352 aa11.45□□□□□ -0.58
NUP98-206ENST00000397013 SBNO2Q9Y2G9 1366 aa11.45□□□□□ -0.58
NUP98-206ENST00000397013 CLCN6P51797 869 aa11.45□□□□□ -0.58
NUP98-206ENST00000397013 C1QTNF8P60827 252 aa11.45□□□□□ -0.58
NUP98-206ENST00000397013 GPR162Q16538 588 aa11.45□□□□□ -0.58
NUP98-206ENST00000397013 PELP1Q8IZL8 1130 aaKnown RBP11.45□□□□□ -0.58
NUP98-206ENST00000397013 NLGN2Q8NFZ4 835 aa11.45□□□□□ -0.58
NUP98-206ENST00000397013 RGPD5Q99666 1765 aa11.45□□□□□ -0.58
NUP98-206ENST00000397013 CD163L1Q9NR16 1453 aa11.44□□□□□ -0.58
NUP98-206ENST00000397013 PRIM1P49642 420 aaKnown RBP11.44□□□□□ -0.58
NUP98-206ENST00000397013 PNPLA7Q6ZV29 1317 aa11.43□□□□□ -0.58
NUP98-206ENST00000397013 SYTL4Q96C24 671 aaPredicted RBP11.43□□□□□ -0.58
NUP98-206ENST00000397013 RGPD3A6NKT7 1758 aaPredicted RBP11.43□□□□□ -0.58
NUP98-206ENST00000397013 RGPD4Q7Z3J3 1758 aa11.43□□□□□ -0.58
NUP98-206ENST00000397013 TSHZ2Q9NRE2 1034 aa11.42□□□□□ -0.58
NUP98-206ENST00000397013 TFCP2L1Q9NZI6 479 aa11.42□□□□□ -0.58
NUP98-206ENST00000397013 IP6K1Q92551 441 aa11.41□□□□□ -0.58
NUP98-206ENST00000397013 CARD11Q9BXL7 1154 aa11.41□□□□□ -0.58
NUP98-206ENST00000397013 TRPM1Q7Z4N2 1603 aa11.41□□□□□ -0.58
NUP98-206ENST00000397013 WNK3Q9BYP7 1800 aa11.4□□□□□ -0.58
NUP98-206ENST00000397013 YBX3P16989 372 aaKnown RBP eCLIP11.4□□□□□ -0.581e-8■□□□□ 8.9
NUP98-206ENST00000397013 SMIM5Q71RC9 77 aa11.4□□□□□ -0.58
NUP98-206ENST00000397013 HDGFL2Q7Z4V5 671 aaPredicted RBP11.4□□□□□ -0.58
NUP98-206ENST00000397013 PHF12Q96QT6 1004 aa11.4□□□□□ -0.58
NUP98-206ENST00000397013 PAPPAQ13219 1627 aa11.39□□□□□ -0.59
NUP98-206ENST00000397013 MSL1Q68DK7 614 aa11.39□□□□□ -0.59
NUP98-206ENST00000397013 COL23A1Q86Y22 540 aaPredicted RBP11.39□□□□□ -0.59
NUP98-206ENST00000397013 USHBP1Q8N6Y0 703 aa11.39□□□□□ -0.59
NUP98-206ENST00000397013 A0A1W2PP64 1363 aa11.39□□□□□ -0.59
NUP98-206ENST00000397013 MAP3K5Q99683 1374 aa11.39□□□□□ -0.59
NUP98-206ENST00000397013 MAP3K19Q56UN5 1328 aa11.38□□□□□ -0.59
NUP98-206ENST00000397013 CEP350Q5VT06 3117 aa11.38□□□□□ -0.59
NUP98-206ENST00000397013 POLD1P28340 1107 aa11.38□□□□□ -0.59
NUP98-206ENST00000397013 HOXC9P31274 260 aa11.38□□□□□ -0.59
NUP98-206ENST00000397013 SLC27A3Q5K4L6 730 aa11.38□□□□□ -0.59
NUP98-206ENST00000397013 NHSQ6T4R5 1651 aa11.38□□□□□ -0.59
NUP98-206ENST00000397013 ABCC6O95255 1503 aa11.38□□□□□ -0.59
NUP98-206ENST00000397013 AKAP12Q02952 1782 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms