RNA–Protein interactions for RNA: ENST00000396684.2

ATN1-202, Transcript of atrophin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATN1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATN1-202ENST00000396684 CHMP3Q9Y3E7 222 aa14.8□□□□□ -0.04
ATN1-202ENST00000396684 ARHGEF28Q8N1W1 1705 aaKnown RBP14.8□□□□□ -0.04
ATN1-202ENST00000396684 UBTFL1P0CB47 393 aaPredicted RBP14.8□□□□□ -0.04
ATN1-202ENST00000396684 PDZRN3Q9UPQ7 1066 aa14.8□□□□□ -0.04
ATN1-202ENST00000396684 RIC3Q7Z5B4 369 aa14.8□□□□□ -0.04
ATN1-202ENST00000396684 PLEKHF1Q96S99 279 aa14.8□□□□□ -0.04
ATN1-202ENST00000396684 MYO5BQ9ULV0 1848 aa14.8□□□□□ -0.04
ATN1-202ENST00000396684 CEP170BQ9Y4F5 1589 aaPredicted RBP14.8□□□□□ -0.04
ATN1-202ENST00000396684 MED14O60244 1454 aa14.79□□□□□ -0.04
ATN1-202ENST00000396684 NUTM2BA6NNL0 878 aaPredicted RBP14.79□□□□□ -0.04
ATN1-202ENST00000396684 NUTM2EB1AL46 878 aaPredicted RBP14.79□□□□□ -0.04
ATN1-202ENST00000396684 NPHP1O15259 732 aa14.79□□□□□ -0.04
ATN1-202ENST00000396684 NUTM2AQ8IVF1 878 aaPredicted RBP14.79□□□□□ -0.04
ATN1-202ENST00000396684 C8orf58Q8NAV2 365 aa14.79□□□□□ -0.04
ATN1-202ENST00000396684 MYO3AQ8NEV4 1616 aa14.78□□□□□ -0.04
ATN1-202ENST00000396684 IPO9Q96P70 1041 aaKnown RBP14.78□□□□□ -0.04
ATN1-202ENST00000396684 CPSF1Q10570 1443 aaKnown RBP14.78□□□□□ -0.04
ATN1-202ENST00000396684 CDK12Q9NYV4 1490 aaPredicted RBP14.78□□□□□ -0.04
ATN1-202ENST00000396684 ARHGEF10O15013 1369 aa14.77□□□□□ -0.04
ATN1-202ENST00000396684 TRIM6-TRIM34B2RNG4 842 aa14.77□□□□□ -0.04
ATN1-202ENST00000396684 GCC1Q96CN9 775 aa14.77□□□□□ -0.04
ATN1-202ENST00000396684 IFT172Q9UG01 1749 aa14.77□□□□□ -0.04
ATN1-202ENST00000396684 ADGRL3Q9HAR2 1447 aa14.77□□□□□ -0.04
ATN1-202ENST00000396684 SETD1BQ9UPS6 1966 aaKnown RBP14.77□□□□□ -0.05
ATN1-202ENST00000396684 VAMP4O75379 141 aa14.77□□□□□ -0.05
ATN1-202ENST00000396684 GNAI2P04899 355 aa14.77□□□□□ -0.05
ATN1-202ENST00000396684 DDX17Q92841 729 aaKnown RBP14.77□□□□□ -0.05
ATN1-202ENST00000396684 GPATCH3Q96I76 525 aa14.77□□□□□ -0.05
ATN1-202ENST00000396684 TSPYL6Q8N831 410 aa14.76□□□□□ -0.05
ATN1-202ENST00000396684 AKAP4Q5JQC9 854 aa14.76□□□□□ -0.05
ATN1-202ENST00000396684 IFNL2Q8IZJ0 200 aa14.76□□□□□ -0.05
ATN1-202ENST00000396684 MAP3K5Q99683 1374 aa14.76□□□□□ -0.05
ATN1-202ENST00000396684 ARHGAP45Q92619 1136 aa14.76□□□□□ -0.05
ATN1-202ENST00000396684 SRCIN1Q9C0H9 1055 aa14.76□□□□□ -0.05
ATN1-202ENST00000396684 SLAIN2Q9P270 581 aa14.76□□□□□ -0.05
ATN1-202ENST00000396684 HSCBQ8IWL3 235 aa14.75□□□□□ -0.05
ATN1-202ENST00000396684 PTPRUQ92729 1446 aa14.75□□□□□ -0.05
ATN1-202ENST00000396684 PTPRCP08575 1304 aa14.75□□□□□ -0.05
ATN1-202ENST00000396684 TRMT2AQ8IZ69 625 aaKnown RBP14.75□□□□□ -0.05
ATN1-202ENST00000396684 MCCP23508 829 aa14.75□□□□□ -0.05
ATN1-202ENST00000396684 MEX3CQ5U5Q3 659 aaKnown RBP14.74□□□□□ -0.05
ATN1-202ENST00000396684 TAF7LQ5H9L4 462 aa14.74□□□□□ -0.05
ATN1-202ENST00000396684 KCNJ4P48050 445 aa14.74□□□□□ -0.05
ATN1-202ENST00000396684 CDC42BPGQ6DT37 1551 aa14.73□□□□□ -0.05
ATN1-202ENST00000396684 MRPL50Q8N5N7 158 aaKnown RBP14.73□□□□□ -0.05
ATN1-202ENST00000396684 NBPF6Q5VWK0 638 aa14.73□□□□□ -0.05
ATN1-202ENST00000396684 NBPF4Q96M43 638 aa14.73□□□□□ -0.05
ATN1-202ENST00000396684 TNNQ9UQP3 1299 aa14.73□□□□□ -0.05
ATN1-202ENST00000396684 RLBP1P12271 317 aa14.72□□□□□ -0.05
ATN1-202ENST00000396684 FLIIQ13045 1269 aa14.72□□□□□ -0.05
ATN1-202ENST00000396684 KRT24Q2M2I5 525 aa14.72□□□□□ -0.05
ATN1-202ENST00000396684 HSP90AB4PQ58FF6 505 aa14.72□□□□□ -0.05
ATN1-202ENST00000396684 RPAP2Q8IXW5 612 aaPredicted RBP14.72□□□□□ -0.05
ATN1-202ENST00000396684 F6X3S4 739 aa14.72□□□□□ -0.05
ATN1-202ENST00000396684 ADAMTS2O95450 1211 aa14.72□□□□□ -0.05
ATN1-202ENST00000396684 MYL6BP14649 208 aa14.72□□□□□ -0.05
ATN1-202ENST00000396684 SLIT1O75093 1534 aa14.72□□□□□ -0.05
ATN1-202ENST00000396684 KIAA1211Q6ZU35 1233 aa14.72□□□□□ -0.05
ATN1-202ENST00000396684 PNPLA6Q8IY17 1366 aa14.71□□□□□ -0.05
ATN1-202ENST00000396684 KIF24Q5T7B8 1368 aa14.71□□□□□ -0.05
ATN1-202ENST00000396684 CHL1O00533 1208 aa14.71□□□□□ -0.05
ATN1-202ENST00000396684 RBM42Q9BTD8 480 aaKnown RBP14.71□□□□□ -0.05
ATN1-202ENST00000396684 DIP2AQ14689 1571 aa14.71□□□□□ -0.05
ATN1-202ENST00000396684 SKAP1Q86WV1 359 aa14.71□□□□□ -0.06
ATN1-202ENST00000396684 BACH2Q9BYV9 841 aa14.71□□□□□ -0.06
ATN1-202ENST00000396684 DBF4Q9UBU7 674 aaPredicted RBP14.71□□□□□ -0.06
ATN1-202ENST00000396684 ARHGAP23Q9P227 1491 aa14.71□□□□□ -0.06
ATN1-202ENST00000396684 ANP32EQ9BTT0 268 aa14.7□□□□□ -0.06
ATN1-202ENST00000396684 RILPL2Q969X0 211 aa14.7□□□□□ -0.06
ATN1-202ENST00000396684 IGSF1Q8N6C5 1336 aa14.7□□□□□ -0.06
ATN1-202ENST00000396684 RTL1A6NKG5 1358 aa14.69□□□□□ -0.06
ATN1-202ENST00000396684 CPS1P31327 1500 aa14.69□□□□□ -0.06
ATN1-202ENST00000396684 TOM1O60784 492 aa14.69□□□□□ -0.06
ATN1-202ENST00000396684 SURF6O75683 361 aaKnown RBP14.69□□□□□ -0.06
ATN1-202ENST00000396684 IGHDP01880 384 aa14.69□□□□□ -0.06
ATN1-202ENST00000396684 CHD1LQ86WJ1 897 aa14.69□□□□□ -0.06
ATN1-202ENST00000396684 G3BP1Q13283 466 aaKnown RBP eCLIP14.69□□□□□ -0.06
ATN1-202ENST00000396684 PCDHB15Q9Y5E8 787 aa14.69□□□□□ -0.06
ATN1-202ENST00000396684 UBR1Q8IWV7 1749 aa14.69□□□□□ -0.06
ATN1-202ENST00000396684 LMTK3Q96Q04 1460 aa14.69□□□□□ -0.06
ATN1-202ENST00000396684 ARHGEF25Q86VW2 580 aa14.69□□□□□ -0.06
ATN1-202ENST00000396684 C3P01024 1663 aa14.68□□□□□ -0.06
ATN1-202ENST00000396684 GORABQ5T7V8 394 aa14.68□□□□□ -0.06
ATN1-202ENST00000396684 ZNF335Q9H4Z2 1342 aaPredicted RBP14.68□□□□□ -0.06
ATN1-202ENST00000396684 PTCD1O75127 700 aaKnown RBP14.68□□□□□ -0.06
ATN1-202ENST00000396684 ZCRB1Q8TBF4 217 aaKnown RBP14.67□□□□□ -0.06
ATN1-202ENST00000396684 FMNL2Q96PY5 1086 aa14.67□□□□□ -0.06
ATN1-202ENST00000396684 USP31Q70CQ4 1352 aa14.67□□□□□ -0.06
ATN1-202ENST00000396684 TMOD3Q9NYL9 352 aa14.67□□□□□ -0.06
ATN1-202ENST00000396684 MYOM1P52179 1685 aa14.67□□□□□ -0.06
ATN1-202ENST00000396684 IFIT2P09913 472 aaKnown RBP14.66□□□□□ -0.06
ATN1-202ENST00000396684 BABAM1Q9NWV8 329 aa14.66□□□□□ -0.06
ATN1-202ENST00000396684 RNMTO43148 476 aaKnown RBP14.66□□□□□ -0.06
ATN1-202ENST00000396684 SPRYD3Q8NCJ5 442 aa14.66□□□□□ -0.06
ATN1-202ENST00000396684 HYPKQ9NX55 129 aa14.66□□□□□ -0.06
ATN1-202ENST00000396684 DNAAF4Q8WXU2 420 aa14.66□□□□□ -0.06
ATN1-202ENST00000396684 CD163L1Q9NR16 1453 aa14.65□□□□□ -0.06
ATN1-202ENST00000396684 GTF2E1P29083 439 aaPredicted RBP14.65□□□□□ -0.06
ATN1-202ENST00000396684 PHF23Q9BUL5 403 aaPredicted RBP14.65□□□□□ -0.06
ATN1-202ENST00000396684 SOS1Q07889 1333 aaPredicted RBP14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms