RNA–Protein interactions for RNA: ENST00000396603.6

CLTA-203, Transcript of clathrin light chain A, humanhuman

TSL 1 (best) BASIC

Gene CLTA, Length 1,090 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTA-203ENST00000396603 MEGF6O75095 1541 aa22.74■■□□□ 1.23
CLTA-203ENST00000396603 AKT1S1Q96B36 256 aa22.74■■□□□ 1.23
CLTA-203ENST00000396603 SYT17Q9BSW7 474 aa22.73■■□□□ 1.23
CLTA-203ENST00000396603 CLSPNQ9HAW4 1339 aa22.73■■□□□ 1.23
CLTA-203ENST00000396603 FLT4P35916 1363 aa22.73■■□□□ 1.23
CLTA-203ENST00000396603 SHANK3Q9BYB0 1731 aa22.72■■□□□ 1.23
CLTA-203ENST00000396603 ZNF827Q17R98 1081 aa22.72■■□□□ 1.23
CLTA-203ENST00000396603 FHDC1Q9C0D6 1143 aaPredicted RBP22.72■■□□□ 1.23
CLTA-203ENST00000396603 GGNBP2Q9H3C7 697 aa22.72■■□□□ 1.23
CLTA-203ENST00000396603 NSD2O96028 1365 aa22.72■■□□□ 1.23
CLTA-203ENST00000396603 RRS1Q15050 365 aaKnown RBP22.71■■□□□ 1.23
CLTA-203ENST00000396603 NBPF6Q5VWK0 638 aa22.71■■□□□ 1.23
CLTA-203ENST00000396603 NBPF4Q96M43 638 aa22.71■■□□□ 1.23
CLTA-203ENST00000396603 ARXQ96QS3 562 aa22.71■■□□□ 1.23
CLTA-203ENST00000396603 DOT1LQ8TEK3 1739 aa22.71■■□□□ 1.23
CLTA-203ENST00000396603 FBLN1P23142 703 aa22.7■■□□□ 1.22
CLTA-203ENST00000396603 PRIM1P49642 420 aaKnown RBP22.7■■□□□ 1.22
CLTA-203ENST00000396603 RAPGEF4Q8WZA2 1011 aa22.7■■□□□ 1.22
CLTA-203ENST00000396603 KIF20BQ96Q89 1820 aa22.7■■□□□ 1.22
CLTA-203ENST00000396603 LY75O60449 1722 aa22.69■■□□□ 1.22
CLTA-203ENST00000396603 SYTL4Q96C24 671 aaPredicted RBP22.68■■□□□ 1.22
CLTA-203ENST00000396603 COL24A1Q17RW2 1714 aa22.68■■□□□ 1.22
CLTA-203ENST00000396603 PCDH11XQ9BZA7 1347 aa22.67■■□□□ 1.22
CLTA-203ENST00000396603 PCDH11YQ9BZA8 1340 aa22.67■■□□□ 1.22
CLTA-203ENST00000396603 TATP17735 454 aaPredicted RBP22.67■■□□□ 1.22
CLTA-203ENST00000396603 RGPD2P0DJD1 1756 aa22.67■■□□□ 1.22
CLTA-203ENST00000396603 PNPLA7Q6ZV29 1317 aa22.65■■□□□ 1.22
CLTA-203ENST00000396603 POLD1P28340 1107 aa22.65■■□□□ 1.22
CLTA-203ENST00000396603 HSP90AB2PQ58FF8 381 aa22.64■■□□□ 1.21
CLTA-203ENST00000396603 TFCP2L1Q9NZI6 479 aa22.64■■□□□ 1.21
CLTA-203ENST00000396603 NCAPD2Q15021 1401 aa22.64■■□□□ 1.21
CLTA-203ENST00000396603 NSD3Q9BZ95 1437 aa22.64■■□□□ 1.21
CLTA-203ENST00000396603 CCNL1Q9UK58 526 aaPredicted RBP22.63■■□□□ 1.21
CLTA-203ENST00000396603 KAT6BQ8WYB5 2073 aa22.62■■□□□ 1.21
CLTA-203ENST00000396603 CARD14Q9BXL6 1004 aa22.62■■□□□ 1.21
CLTA-203ENST00000396603 UTRNP46939 3433 aa22.62■■□□□ 1.21
CLTA-203ENST00000396603 ANKRD26Q9UPS8 1709 aa22.61■■□□□ 1.21
CLTA-203ENST00000396603 PLEKHG2Q9H7P9 1386 aa22.61■■□□□ 1.21
CLTA-203ENST00000396603 USHBP1Q8N6Y0 703 aa22.6■■□□□ 1.21
CLTA-203ENST00000396603 WASHC2AQ641Q2 1341 aa22.58■■□□□ 1.21
CLTA-203ENST00000396603 PKD1L3Q7Z443 1732 aa22.58■■□□□ 1.21
CLTA-203ENST00000396603 TUBGCP6Q96RT7 1819 aa22.57■■□□□ 1.2
CLTA-203ENST00000396603 CCER1Q8TC90 406 aaPredicted RBP22.57■■□□□ 1.2
CLTA-203ENST00000396603 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP22.57■■□□□ 1.21e-8■■■■□ 20.2
CLTA-203ENST00000396603 FLAD1Q8NFF5 587 aa22.56■■□□□ 1.2
CLTA-203ENST00000396603 SMARCC1Q92922 1105 aaPredicted RBP22.56■■□□□ 1.2
CLTA-203ENST00000396603 EMILIN1Q9Y6C2 1016 aa22.56■■□□□ 1.2
CLTA-203ENST00000396603 CYP27B1O15528 508 aa22.55■■□□□ 1.2
CLTA-203ENST00000396603 NKX1-1Q15270 411 aaPredicted RBP22.55■■□□□ 1.2
CLTA-203ENST00000396603 PALLDQ8WX93 1383 aa22.54■■□□□ 1.2
CLTA-203ENST00000396603 KCNQ4P56696 695 aa22.54■■□□□ 1.2
CLTA-203ENST00000396603 SPG7Q9UQ90 795 aa22.54■■□□□ 1.2
CLTA-203ENST00000396603 C5P01031 1676 aa22.53■■□□□ 1.2
CLTA-203ENST00000396603 ZNF784Q8NCA9 323 aaPredicted RBP22.53■■□□□ 1.2
CLTA-203ENST00000396603 CHD4Q14839 1912 aa22.52■■□□□ 1.2
CLTA-203ENST00000396603 GPR162Q16538 588 aa22.5■■□□□ 1.19
CLTA-203ENST00000396603 MPRIPQ6WCQ1 1025 aa22.5■■□□□ 1.19
CLTA-203ENST00000396603 COL23A1Q86Y22 540 aaPredicted RBP22.5■■□□□ 1.19
CLTA-203ENST00000396603 TOGARAM1Q9Y4F4 1720 aa22.49■■□□□ 1.19
CLTA-203ENST00000396603 POLKQ9UBT6 870 aa22.48■■□□□ 1.19
CLTA-203ENST00000396603 PPM1GO15355 546 aaPredicted RBP22.47■■□□□ 1.19
CLTA-203ENST00000396603 EYA1Q99502 592 aa22.47■■□□□ 1.19
CLTA-203ENST00000396603 TAF1LQ8IZX4 1826 aa22.47■■□□□ 1.19
CLTA-203ENST00000396603 C4BP0C0L5 1744 aa22.45■■□□□ 1.19
CLTA-203ENST00000396603 ITGB4P16144 1822 aa22.45■■□□□ 1.19
CLTA-203ENST00000396603 MSH5O43196 834 aa22.45■■□□□ 1.18
CLTA-203ENST00000396603 EIF4G2P78344 907 aaKnown RBP eCLIP22.45■■□□□ 1.18
CLTA-203ENST00000396603 IFNL2Q8IZJ0 200 aa22.45■■□□□ 1.18
CLTA-203ENST00000396603 PIGBQ92521 554 aa22.45■■□□□ 1.18
CLTA-203ENST00000396603 MAP2P11137 1827 aaKnown RBP22.45■■□□□ 1.18
CLTA-203ENST00000396603 GRIN3BO60391 1043 aa22.44■■□□□ 1.18
CLTA-203ENST00000396603 KLHL34Q8N239 644 aa22.44■■□□□ 1.18
CLTA-203ENST00000396603 CD2APQ9Y5K6 639 aa22.44■■□□□ 1.18
CLTA-203ENST00000396603 AK7Q96M32 723 aa22.43■■□□□ 1.18
CLTA-203ENST00000396603 PHKG2P15735 406 aa22.42■■□□□ 1.18
CLTA-203ENST00000396603 SSFA2P28290 1259 aa22.42■■□□□ 1.18
CLTA-203ENST00000396603 NLGN2Q8NFZ4 835 aa22.42■■□□□ 1.18
CLTA-203ENST00000396603 TMOD3Q9NYL9 352 aa22.42■■□□□ 1.18
CLTA-203ENST00000396603 IGSF1Q8N6C5 1336 aa22.41■■□□□ 1.18
CLTA-203ENST00000396603 EIF4A2Q14240 407 aaKnown RBP22.41■■□□□ 1.18
CLTA-203ENST00000396603 GOLGB1Q14789 3259 aaKnown RBP22.41■■□□□ 1.18
CLTA-203ENST00000396603 LOC102724428A0A0B4J2F2 783 aa22.4■■□□□ 1.18
CLTA-203ENST00000396603 SIK1P57059 783 aa22.4■■□□□ 1.18
CLTA-203ENST00000396603 HSP90AB1P08238 724 aaKnown RBP22.38■■□□□ 1.17
CLTA-203ENST00000396603 UBR3Q6ZT12 1888 aa22.37■■□□□ 1.17
CLTA-203ENST00000396603 ZNF831Q5JPB2 1677 aa22.36■■□□□ 1.17
CLTA-203ENST00000396603 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.36■■□□□ 1.17
CLTA-203ENST00000396603 ERVV-2B6SEH9 535 aa22.36■■□□□ 1.17
CLTA-203ENST00000396603 HSPA5P11021 654 aaKnown RBP22.36■■□□□ 1.17
CLTA-203ENST00000396603 MSL1Q68DK7 614 aa22.36■■□□□ 1.17
CLTA-203ENST00000396603 PELP1Q8IZL8 1130 aaKnown RBP22.36■■□□□ 1.17
CLTA-203ENST00000396603 PANK3Q9H999 370 aa22.36■■□□□ 1.17
CLTA-203ENST00000396603 AMOTQ4VCS5 1084 aa22.35■■□□□ 1.17
CLTA-203ENST00000396603 DCAF5Q96JK2 942 aa22.35■■□□□ 1.17
CLTA-203ENST00000396603 POLR3GLQ9BT43 218 aa22.35■■□□□ 1.17
CLTA-203ENST00000396603 YBX3P16989 372 aaKnown RBP eCLIP22.34■■□□□ 1.17
CLTA-203ENST00000396603 LINC00116Q8NCU8 138 aa22.34■■□□□ 1.17
CLTA-203ENST00000396603 C1QTNF8P60827 252 aa22.33■■□□□ 1.17
CLTA-203ENST00000396603 PLEKHO1Q53GL0 409 aaPredicted RBP22.33■■□□□ 1.17
CLTA-203ENST00000396603 ASAP1Q9ULH1 1129 aa22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms