RNA–Protein interactions for RNA: ENST00000394440.7

CCT4-201, Transcript of chaperonin containing TCP1 subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCT4, Length 2,520 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCT4-201ENST00000394440 NBPF4Q96M43 638 aa19.25■□□□□ 0.67
CCT4-201ENST00000394440 TNNQ9UQP3 1299 aa19.25■□□□□ 0.67
CCT4-201ENST00000394440 SPATA31A3Q5VYP0 1347 aa19.25■□□□□ 0.67
CCT4-201ENST00000394440 VAMP4O75379 141 aa19.24■□□□□ 0.67
CCT4-201ENST00000394440 RLBP1P12271 317 aa19.24■□□□□ 0.67
CCT4-201ENST00000394440 PIP4K2BP78356 416 aa19.24■□□□□ 0.67
CCT4-201ENST00000394440 CHL1O00533 1208 aa19.24■□□□□ 0.67
CCT4-201ENST00000394440 ZKSCAN2Q63HK3 967 aa19.24■□□□□ 0.67
CCT4-201ENST00000394440 KDM2BQ8NHM5 1336 aa19.24■□□□□ 0.67
CCT4-201ENST00000394440 HTATSF1O43719 755 aaKnown RBP19.23■□□□□ 0.67
CCT4-201ENST00000394440 TSPYL6Q8N831 410 aa19.23■□□□□ 0.67
CCT4-201ENST00000394440 COG6Q9Y2V7 657 aa19.23■□□□□ 0.67
CCT4-201ENST00000394440 NHSL1Q5SYE7 1610 aa19.23■□□□□ 0.67
CCT4-201ENST00000394440 USHBP1Q8N6Y0 703 aa19.22■□□□□ 0.67
CCT4-201ENST00000394440 KIF16BQ96L93 1317 aa19.22■□□□□ 0.67
CCT4-201ENST00000394440 ZBTB7CA1YPR0 619 aa19.21■□□□□ 0.67
CCT4-201ENST00000394440 SLAIN2Q9P270 581 aa19.21■□□□□ 0.67
CCT4-201ENST00000394440 AXIN2Q9Y2T1 843 aa19.21■□□□□ 0.67
CCT4-201ENST00000394440 FAM208AQ9UK61 1670 aaKnown RBP19.21■□□□□ 0.67
CCT4-201ENST00000394440 MAP3K5Q99683 1374 aa19.21■□□□□ 0.67
CCT4-201ENST00000394440 C8orf58Q8NAV2 365 aa19.2■□□□□ 0.66
CCT4-201ENST00000394440 SOS2Q07890 1332 aaPredicted RBP19.2■□□□□ 0.66
CCT4-201ENST00000394440 KIAA0232Q92628 1395 aa19.2■□□□□ 0.66
CCT4-201ENST00000394440 VIRMAQ69YN4 1812 aaKnown RBP19.2■□□□□ 0.66
CCT4-201ENST00000394440 TRIM27P14373 513 aa19.2■□□□□ 0.66
CCT4-201ENST00000394440 TWISTNBQ3B726 338 aaPredicted RBP19.2■□□□□ 0.66
CCT4-201ENST00000394440 LRRC59Q96AG4 307 aaKnown RBP19.2■□□□□ 0.66
CCT4-201ENST00000394440 ABCA3Q99758 1704 aa19.19■□□□□ 0.66
CCT4-201ENST00000394440 MYT1Q01538 1121 aa19.19■□□□□ 0.66
CCT4-201ENST00000394440 AAMPQ13685 434 aa19.19■□□□□ 0.66
CCT4-201ENST00000394440 ATF7IPQ6VMQ6 1270 aa19.19■□□□□ 0.66
CCT4-201ENST00000394440 ANKRD24Q8TF21 1146 aa19.19■□□□□ 0.66
CCT4-201ENST00000394440 RTF1Q92541 710 aaKnown RBP19.19■□□□□ 0.66
CCT4-201ENST00000394440 GNAT3A8MTJ3 354 aa19.19■□□□□ 0.66
CCT4-201ENST00000394440 MS4A1P11836 297 aa19.19■□□□□ 0.66
CCT4-201ENST00000394440 ERBB3P21860 1342 aa19.19■□□□□ 0.66
CCT4-201ENST00000394440 PLEKHG5O94827 1062 aa19.18■□□□□ 0.66
CCT4-201ENST00000394440 DZIP1LQ8IYY4 767 aaKnown RBP19.18■□□□□ 0.66
CCT4-201ENST00000394440 CLUAP1Q96AJ1 413 aa19.18■□□□□ 0.66
CCT4-201ENST00000394440 NOB1Q9ULX3 412 aaKnown RBP19.18■□□□□ 0.66
CCT4-201ENST00000394440 CPDO75976 1380 aa19.17■□□□□ 0.66
CCT4-201ENST00000394440 ZC3H6P61129 1189 aaKnown RBP19.17■□□□□ 0.66
CCT4-201ENST00000394440 MVPQ14764 893 aaKnown RBP19.17■□□□□ 0.66
CCT4-201ENST00000394440 CENPQQ7L2Z9 268 aaPredicted RBP19.17■□□□□ 0.66
CCT4-201ENST00000394440 MRPL50Q8N5N7 158 aaKnown RBP19.17■□□□□ 0.66
CCT4-201ENST00000394440 HSPA1LP34931 641 aa19.16■□□□□ 0.66
CCT4-201ENST00000394440 ELL2O00472 640 aaPredicted RBP19.15■□□□□ 0.66
CCT4-201ENST00000394440 CEMIPQ8WUJ3 1361 aa19.15■□□□□ 0.66
CCT4-201ENST00000394440 IPO8O15397 1037 aaKnown RBP19.15■□□□□ 0.66
CCT4-201ENST00000394440 FTSJ3Q8IY81 847 aaKnown RBP19.15■□□□□ 0.66
CCT4-201ENST00000394440 IL17REQ8NFR9 667 aa19.15■□□□□ 0.66
CCT4-201ENST00000394440 CABLES1Q8TDN4 633 aa19.15■□□□□ 0.66
CCT4-201ENST00000394440 ARHGAP45Q92619 1136 aa19.14■□□□□ 0.65
CCT4-201ENST00000394440 ADAMTS7Q9UKP4 1686 aa19.13■□□□□ 0.65
CCT4-201ENST00000394440 KDM3BQ7LBC6 1761 aa19.13■□□□□ 0.65
CCT4-201ENST00000394440 KRT24Q2M2I5 525 aa19.13■□□□□ 0.65
CCT4-201ENST00000394440 HAP1P54257 671 aaPredicted RBP19.12■□□□□ 0.65
CCT4-201ENST00000394440 BABAM1Q9NWV8 329 aa19.12■□□□□ 0.65
CCT4-201ENST00000394440 TSPYL4Q9UJ04 414 aa19.12■□□□□ 0.65
CCT4-201ENST00000394440 AMOTQ4VCS5 1084 aa19.11■□□□□ 0.65
CCT4-201ENST00000394440 MIS18AQ9NYP9 233 aa19.1■□□□□ 0.65
CCT4-201ENST00000394440 CACNA1FO60840 1977 aa19.1■□□□□ 0.65
CCT4-201ENST00000394440 OVOS2A0A0G2JMS6 1433 aa19.1■□□□□ 0.65
CCT4-201ENST00000394440 PLEKHO1Q53GL0 409 aaPredicted RBP19.1■□□□□ 0.65
CCT4-201ENST00000394440 TMEM57Q8N5G2 664 aa19.1■□□□□ 0.65
CCT4-201ENST00000394440 DDX19BQ9UMR2 479 aa19.1■□□□□ 0.65
CCT4-201ENST00000394440 SIPA1L3O60292 1781 aaPredicted RBP19.1■□□□□ 0.65
CCT4-201ENST00000394440 PLEKHG2Q9H7P9 1386 aa19.09■□□□□ 0.65
CCT4-201ENST00000394440 IGHDP01880 384 aa19.09■□□□□ 0.65
CCT4-201ENST00000394440 AKAP4Q5JQC9 854 aa19.09■□□□□ 0.65
CCT4-201ENST00000394440 ILDR2Q71H61 639 aa19.09■□□□□ 0.65
CCT4-201ENST00000394440 RBM19Q9Y4C8 960 aaKnown RBP19.09■□□□□ 0.65
CCT4-201ENST00000394440 PCDHB15Q9Y5E8 787 aa19.09■□□□□ 0.65
CCT4-201ENST00000394440 ABCC4O15439 1325 aa19.08■□□□□ 0.65
CCT4-201ENST00000394440 PKD1L3Q7Z443 1732 aa19.08■□□□□ 0.64
CCT4-201ENST00000394440 TCERG1O14776 1098 aaKnown RBP19.07■□□□□ 0.64
CCT4-201ENST00000394440 TAF7Q15545 349 aaPredicted RBP19.07■□□□□ 0.64
CCT4-201ENST00000394440 ZNF530Q6P9A1 599 aaPredicted RBP19.07■□□□□ 0.64
CCT4-201ENST00000394440 ROBO1Q9Y6N7 1651 aa19.07■□□□□ 0.64
CCT4-201ENST00000394440 CHRNA2Q15822 529 aa19.07■□□□□ 0.64
CCT4-201ENST00000394440 ITPRIPQ8IWB1 547 aa19.07■□□□□ 0.64
CCT4-201ENST00000394440 RGS12O14924 1447 aa19.06■□□□□ 0.64
CCT4-201ENST00000394440 MEGF6O75095 1541 aa19.06■□□□□ 0.64
CCT4-201ENST00000394440 SCN11AQ9UI33 1791 aa19.06■□□□□ 0.64
CCT4-201ENST00000394440 LGR6Q9HBX8 967 aa19.05■□□□□ 0.64
CCT4-201ENST00000394440 AHDC1Q5TGY3 1603 aaPredicted RBP19.05■□□□□ 0.64
CCT4-201ENST00000394440 SOS1Q07889 1333 aaPredicted RBP19.05■□□□□ 0.64
CCT4-201ENST00000394440 API5Q9BZZ5 524 aaKnown RBP19.04■□□□□ 0.64
CCT4-201ENST00000394440 SKAP1Q86WV1 359 aa19.04■□□□□ 0.64
CCT4-201ENST00000394440 ZBTB40Q9NUA8 1239 aa19.04■□□□□ 0.64
CCT4-201ENST00000394440 NLRP2Q9NX02 1062 aa19.04■□□□□ 0.64
CCT4-201ENST00000394440 COL5A2P05997 1499 aaPredicted RBP19.02■□□□□ 0.63
CCT4-201ENST00000394440 RNMTO43148 476 aaKnown RBP19.02■□□□□ 0.63
CCT4-201ENST00000394440 C1orf141Q5JVX7 400 aa19.02■□□□□ 0.63
CCT4-201ENST00000394440 PARP4Q9UKK3 1724 aaKnown RBP19.02■□□□□ 0.63
CCT4-201ENST00000394440 RAPGEF4Q8WZA2 1011 aa19.01■□□□□ 0.63
CCT4-201ENST00000394440 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.01■□□□□ 0.634e-8■■□□□ 11.5
CCT4-201ENST00000394440 COL22A1Q8NFW1 1626 aaPredicted RBP19.01■□□□□ 0.63
CCT4-201ENST00000394440 PTPRCP08575 1304 aa19.01■□□□□ 0.63
CCT4-201ENST00000394440 MPRIPQ6WCQ1 1025 aa19■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms