RNA–Protein interactions for RNA: ENST00000394105.6

GAPVD1-207, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene GAPVD1, Length 5,207 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-207ENST00000394105 CCDC61Q9Y6R9 512 aa9.94□□□□□ -0.82
GAPVD1-207ENST00000394105 NFE2L2Q16236 605 aa9.94□□□□□ -0.82
GAPVD1-207ENST00000394105 DIAPH1O60610 1272 aaKnown RBP9.94□□□□□ -0.82
GAPVD1-207ENST00000394105 NUCB1Q02818 461 aa9.94□□□□□ -0.82
GAPVD1-207ENST00000394105 DDX60Q8IY21 1712 aaKnown RBP9.94□□□□□ -0.82
GAPVD1-207ENST00000394105 TOGARAM1Q9Y4F4 1720 aa9.94□□□□□ -0.82
GAPVD1-207ENST00000394105 TJP1Q07157 1748 aa9.94□□□□□ -0.82
GAPVD1-207ENST00000394105 IGSF1Q8N6C5 1336 aa9.93□□□□□ -0.82
GAPVD1-207ENST00000394105 G2E3Q7L622 706 aa9.93□□□□□ -0.82
GAPVD1-207ENST00000394105 C1orf115Q9H7X2 142 aa9.93□□□□□ -0.82
GAPVD1-207ENST00000394105 KIAA0232Q92628 1395 aa9.93□□□□□ -0.82
GAPVD1-207ENST00000394105 SLC24A1O60721 1099 aa9.93□□□□□ -0.82
GAPVD1-207ENST00000394105 PKD1L3Q7Z443 1732 aa9.93□□□□□ -0.82
GAPVD1-207ENST00000394105 MST1RQ04912 1400 aa9.93□□□□□ -0.82
GAPVD1-207ENST00000394105 C16orf71Q8IYS4 520 aaPredicted RBP9.93□□□□□ -0.82
GAPVD1-207ENST00000394105 NUP188Q5SRE5 1749 aa9.92□□□□□ -0.82
GAPVD1-207ENST00000394105 CEMIPQ8WUJ3 1361 aa9.92□□□□□ -0.82
GAPVD1-207ENST00000394105 PAPPAQ13219 1627 aa9.92□□□□□ -0.82
GAPVD1-207ENST00000394105 RBM33Q96EV2 1170 aaKnown RBP9.92□□□□□ -0.82
GAPVD1-207ENST00000394105 KCNA6P17658 529 aa9.92□□□□□ -0.82
GAPVD1-207ENST00000394105 RTL1A6NKG5 1358 aa9.91□□□□□ -0.82
GAPVD1-207ENST00000394105 HEG1Q9ULI3 1381 aa9.91□□□□□ -0.82
GAPVD1-207ENST00000394105 MCM10Q7L590 875 aa9.91□□□□□ -0.82
GAPVD1-207ENST00000394105 DZIP1LQ8IYY4 767 aaKnown RBP9.91□□□□□ -0.82
GAPVD1-207ENST00000394105 NHSL1Q5SYE7 1610 aa9.91□□□□□ -0.82
GAPVD1-207ENST00000394105 MTHFSDQ2M296 383 aaKnown RBP9.91□□□□□ -0.82
GAPVD1-207ENST00000394105 CHAMP1Q96JM3 812 aa9.91□□□□□ -0.82
GAPVD1-207ENST00000394105 MIS18AQ9NYP9 233 aa9.9□□□□□ -0.82
GAPVD1-207ENST00000394105 CFAP44Q96MT7 982 aa9.9□□□□□ -0.82
GAPVD1-207ENST00000394105 U2SURPO15042 1029 aaKnown RBP9.9□□□□□ -0.82
GAPVD1-207ENST00000394105 RBM42Q9BTD8 480 aaKnown RBP9.9□□□□□ -0.82
GAPVD1-207ENST00000394105 EYA1Q99502 592 aa9.9□□□□□ -0.83
GAPVD1-207ENST00000394105 ALDH1L2Q3SY69 923 aa9.89□□□□□ -0.83
GAPVD1-207ENST00000394105 SLKQ9H2G2 1235 aaPredicted RBP9.89□□□□□ -0.83
GAPVD1-207ENST00000394105 NUTM2FA1L443 756 aa9.89□□□□□ -0.83
GAPVD1-207ENST00000394105 CASZ1Q86V15 1759 aa9.89□□□□□ -0.83
GAPVD1-207ENST00000394105 IL17REQ8NFR9 667 aa9.89□□□□□ -0.83
GAPVD1-207ENST00000394105 TERF2IPQ9NYB0 399 aa9.89□□□□□ -0.83
GAPVD1-207ENST00000394105 CT47B1P0C2W7 299 aaPredicted RBP9.88□□□□□ -0.83
GAPVD1-207ENST00000394105 AMOTL2Q9Y2J4 779 aa9.88□□□□□ -0.83
GAPVD1-207ENST00000394105 LAMA4Q16363 1823 aa9.88□□□□□ -0.83
GAPVD1-207ENST00000394105 IFT57Q9NWB7 429 aa9.88□□□□□ -0.83
GAPVD1-207ENST00000394105 ELL2O00472 640 aaPredicted RBP9.88□□□□□ -0.83
GAPVD1-207ENST00000394105 PPM1GO15355 546 aaPredicted RBP9.88□□□□□ -0.83
GAPVD1-207ENST00000394105 CENPFP49454 3210 aa9.87□□□□□ -0.83
GAPVD1-207ENST00000394105 ZKSCAN2Q63HK3 967 aa9.87□□□□□ -0.83
GAPVD1-207ENST00000394105 LMTK3Q96Q04 1460 aa9.87□□□□□ -0.83
GAPVD1-207ENST00000394105 RBM25P49756 843 aaKnown RBP9.87□□□□□ -0.83
GAPVD1-207ENST00000394105 INTS3Q68E01 1043 aaKnown RBP9.87□□□□□ -0.83
GAPVD1-207ENST00000394105 ARHGEF10O15013 1369 aa9.87□□□□□ -0.83
GAPVD1-207ENST00000394105 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.87□□□□□ -0.83
GAPVD1-207ENST00000394105 AXIN2Q9Y2T1 843 aa9.87□□□□□ -0.83
GAPVD1-207ENST00000394105 ARFGEF2Q9Y6D5 1785 aa9.87□□□□□ -0.83
GAPVD1-207ENST00000394105 LRP10Q7Z4F1 713 aa9.87□□□□□ -0.83
GAPVD1-207ENST00000394105 TBX22Q9Y458 520 aa9.86□□□□□ -0.83
GAPVD1-207ENST00000394105 PARP4Q9UKK3 1724 aaKnown RBP9.86□□□□□ -0.83
GAPVD1-207ENST00000394105 ANKARQ7Z5J8 1434 aa9.86□□□□□ -0.83
GAPVD1-207ENST00000394105 MYO5AQ9Y4I1 1855 aaKnown RBP9.86□□□□□ -0.83
GAPVD1-207ENST00000394105 BRCA2P51587 3418 aa9.86□□□□□ -0.83
GAPVD1-207ENST00000394105 PKP1Q13835 747 aa9.86□□□□□ -0.83
GAPVD1-207ENST00000394105 PMFBP1Q8TBY8 1022 aa9.86□□□□□ -0.83
GAPVD1-207ENST00000394105 COL4A1P02462 1669 aa9.86□□□□□ -0.83
GAPVD1-207ENST00000394105 PLEKHM2Q8IWE5 1019 aa9.86□□□□□ -0.83
GAPVD1-207ENST00000394105 ARHGAP45Q92619 1136 aa9.86□□□□□ -0.83
GAPVD1-207ENST00000394105 SMC4Q9NTJ3 1288 aa9.86□□□□□ -0.83
GAPVD1-207ENST00000394105 SULT6B1Q6IMI4 303 aa9.85□□□□□ -0.83
GAPVD1-207ENST00000394105 MEIS3Q99687 375 aa9.85□□□□□ -0.83
GAPVD1-207ENST00000394105 SBNO1A3KN83 1393 aa9.85□□□□□ -0.83
GAPVD1-207ENST00000394105 SPRYD3Q8NCJ5 442 aa9.85□□□□□ -0.83
GAPVD1-207ENST00000394105 KCNQ3O43525 872 aa9.84□□□□□ -0.83
GAPVD1-207ENST00000394105 NWD2Q9ULI1 1742 aa9.84□□□□□ -0.83
GAPVD1-207ENST00000394105 PRAMEF22A3QJZ6 481 aa9.83□□□□□ -0.84
GAPVD1-207ENST00000394105 CEP85Q6P2H3 762 aa9.83□□□□□ -0.84
GAPVD1-207ENST00000394105 KAZALD1Q96I82 304 aa9.83□□□□□ -0.84
GAPVD1-207ENST00000394105 MYH16Q9H6N6 1097 aa9.83□□□□□ -0.84
GAPVD1-207ENST00000394105 ZDHHC9Q9Y397 364 aa9.83□□□□□ -0.84
GAPVD1-207ENST00000394105 HOXC9P31274 260 aa9.82□□□□□ -0.84
GAPVD1-207ENST00000394105 UNC5CLQ8IV45 518 aa9.82□□□□□ -0.84
GAPVD1-207ENST00000394105 UBE2Q2Q8WVN8 375 aa9.82□□□□□ -0.84
GAPVD1-207ENST00000394105 LAMB4A4D0S4 1761 aa9.82□□□□□ -0.84
GAPVD1-207ENST00000394105 PNMA6EA0A0J9YXQ4 647 aa9.82□□□□□ -0.84
GAPVD1-207ENST00000394105 MCM4P33991 863 aa9.82□□□□□ -0.84
GAPVD1-207ENST00000394105 TWISTNBQ3B726 338 aaPredicted RBP9.82□□□□□ -0.84
GAPVD1-207ENST00000394105 CHD1LQ86WJ1 897 aa9.82□□□□□ -0.84
GAPVD1-207ENST00000394105 FAM43AQ8N2R8 423 aa9.82□□□□□ -0.84
GAPVD1-207ENST00000394105 LNPKQ9C0E8 428 aa9.82□□□□□ -0.84
GAPVD1-207ENST00000394105 DCTPP1Q9H773 170 aa9.82□□□□□ -0.84
GAPVD1-207ENST00000394105 MRC1P22897 1456 aa9.82□□□□□ -0.84
GAPVD1-207ENST00000394105 KDM6AO15550 1401 aaPredicted RBP9.82□□□□□ -0.84
GAPVD1-207ENST00000394105 SLIT2O94813 1529 aa9.82□□□□□ -0.84
GAPVD1-207ENST00000394105 CYP2E1P05181 493 aaPredicted RBP9.81□□□□□ -0.84
GAPVD1-207ENST00000394105 TBC1D9Q6ZT07 1266 aa9.81□□□□□ -0.84
GAPVD1-207ENST00000394105 KIF1AQ12756 1690 aa9.81□□□□□ -0.84
GAPVD1-207ENST00000394105 MAPK8IP3Q9UPT6 1336 aa9.81□□□□□ -0.84
GAPVD1-207ENST00000394105 NBPF6Q5VWK0 638 aa9.81□□□□□ -0.84
GAPVD1-207ENST00000394105 NBPF4Q96M43 638 aa9.81□□□□□ -0.84
GAPVD1-207ENST00000394105 ADCY9O60503 1353 aa9.81□□□□□ -0.84
GAPVD1-207ENST00000394105 ADGRL3Q9HAR2 1447 aa9.81□□□□□ -0.84
GAPVD1-207ENST00000394105 F6X3S4 739 aa9.81□□□□□ -0.84
GAPVD1-207ENST00000394105 HDGFL2Q7Z4V5 671 aaPredicted RBP9.81□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms