RNA–Protein interactions for RNA: ENST00000394092.6

SMAD1-202, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,658 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-202ENST00000394092 VAMP4O75379 141 aa9.09□□□□□ -0.95
SMAD1-202ENST00000394092 SULT6B1Q6IMI4 303 aa9.09□□□□□ -0.95
SMAD1-202ENST00000394092 MRPL50Q8N5N7 158 aaKnown RBP9.09□□□□□ -0.95
SMAD1-202ENST00000394092 ATF5Q9Y2D1 282 aaPredicted RBP9.09□□□□□ -0.95
SMAD1-202ENST00000394092 CACNA1FO60840 1977 aa9.09□□□□□ -0.95
SMAD1-202ENST00000394092 KIAA0232Q92628 1395 aa9.08□□□□□ -0.96
SMAD1-202ENST00000394092 ABCC4O15439 1325 aa9.08□□□□□ -0.96
SMAD1-202ENST00000394092 BECN1Q14457 450 aa9.08□□□□□ -0.96
SMAD1-202ENST00000394092 SMC5Q8IY18 1101 aa9.08□□□□□ -0.96
SMAD1-202ENST00000394092 LRRC37A3O60309 1634 aa9.08□□□□□ -0.96
SMAD1-202ENST00000394092 NUTM2FA1L443 756 aa9.07□□□□□ -0.96
SMAD1-202ENST00000394092 LTN1O94822 1766 aa9.07□□□□□ -0.96
SMAD1-202ENST00000394092 RTL1A6NKG5 1358 aa9.07□□□□□ -0.96
SMAD1-202ENST00000394092 KDRP35968 1356 aa9.07□□□□□ -0.96
SMAD1-202ENST00000394092 ADAMTSL3P82987 1691 aa9.07□□□□□ -0.96
SMAD1-202ENST00000394092 GCC1Q96CN9 775 aa9.07□□□□□ -0.96
SMAD1-202ENST00000394092 THUMPD2Q9BTF0 503 aaKnown RBP9.07□□□□□ -0.96
SMAD1-202ENST00000394092 PLSCR2Q9NRY7 297 aa9.07□□□□□ -0.96
SMAD1-202ENST00000394092 MAP3K19Q56UN5 1328 aa9.06□□□□□ -0.96
SMAD1-202ENST00000394092 AMPHP49418 695 aa9.06□□□□□ -0.96
SMAD1-202ENST00000394092 HSP90AB2PQ58FF8 381 aa9.06□□□□□ -0.96
SMAD1-202ENST00000394092 GAS2L2Q8NHY3 880 aa9.06□□□□□ -0.96
SMAD1-202ENST00000394092 IGSF1Q8N6C5 1336 aa9.05□□□□□ -0.96
SMAD1-202ENST00000394092 PRKAR2AP13861 404 aaKnown RBP9.05□□□□□ -0.96
SMAD1-202ENST00000394092 ANKLE2Q86XL3 938 aa9.05□□□□□ -0.96
SMAD1-202ENST00000394092 AEBP1Q8IUX7 1158 aa9.05□□□□□ -0.96
SMAD1-202ENST00000394092 TSPYL6Q8N831 410 aa9.05□□□□□ -0.96
SMAD1-202ENST00000394092 RTF1Q92541 710 aaKnown RBP9.05□□□□□ -0.96
SMAD1-202ENST00000394092 PHRF1Q9P1Y6 1649 aaKnown RBP9.05□□□□□ -0.96
SMAD1-202ENST00000394092 PTPRCP08575 1304 aa9.05□□□□□ -0.96
SMAD1-202ENST00000394092 CHL1O00533 1208 aa9.04□□□□□ -0.96
SMAD1-202ENST00000394092 ZBTB7BO15156 539 aaPredicted RBP9.04□□□□□ -0.96
SMAD1-202ENST00000394092 EIF5BO60841 1220 aaKnown RBP9.04□□□□□ -0.96
SMAD1-202ENST00000394092 GABBR2O75899 941 aa9.04□□□□□ -0.96
SMAD1-202ENST00000394092 KCNA6P17658 529 aa9.04□□□□□ -0.96
SMAD1-202ENST00000394092 FAM208AQ9UK61 1670 aaKnown RBP9.04□□□□□ -0.96
SMAD1-202ENST00000394092 USP19O94966 1318 aa9.04□□□□□ -0.96
SMAD1-202ENST00000394092 N4BP2Q86UW6 1770 aaPredicted RBP9.04□□□□□ -0.96
SMAD1-202ENST00000394092 ADGRL3Q9HAR2 1447 aa9.04□□□□□ -0.96
SMAD1-202ENST00000394092 FAM83GA6ND36 823 aa9.04□□□□□ -0.96
SMAD1-202ENST00000394092 C19orf67A6NJJ6 358 aa9.04□□□□□ -0.96
SMAD1-202ENST00000394092 HTATSF1O43719 755 aaKnown RBP9.04□□□□□ -0.96
SMAD1-202ENST00000394092 NUCB1Q02818 461 aa9.04□□□□□ -0.96
SMAD1-202ENST00000394092 C8orf58Q8NAV2 365 aa9.04□□□□□ -0.96
SMAD1-202ENST00000394092 TBC1D32Q96NH3 1257 aa9.04□□□□□ -0.96
SMAD1-202ENST00000394092 SOS1Q07889 1333 aaPredicted RBP9.03□□□□□ -0.96
SMAD1-202ENST00000394092 CRB1P82279 1406 aa9.03□□□□□ -0.96
SMAD1-202ENST00000394092 ELL2O00472 640 aaPredicted RBP9.03□□□□□ -0.96
SMAD1-202ENST00000394092 SOX12O15370 315 aa9.03□□□□□ -0.96
SMAD1-202ENST00000394092 NLRP6P59044 892 aa9.03□□□□□ -0.96
SMAD1-202ENST00000394092 DCTN1Q14203 1278 aa9.03□□□□□ -0.96
SMAD1-202ENST00000394092 NWD1Q149M9 1564 aa9.02□□□□□ -0.97
SMAD1-202ENST00000394092 DEKP35659 375 aaKnown RBP9.02□□□□□ -0.97
SMAD1-202ENST00000394092 CHD1LQ86WJ1 897 aa9.02□□□□□ -0.97
SMAD1-202ENST00000394092 KIF1AQ12756 1690 aa9.02□□□□□ -0.97
SMAD1-202ENST00000394092 INTS3Q68E01 1043 aaKnown RBP9.01□□□□□ -0.97
SMAD1-202ENST00000394092 MCM10Q7L590 875 aa9.01□□□□□ -0.97
SMAD1-202ENST00000394092 PHF8Q9UPP1 1060 aa9.01□□□□□ -0.97
SMAD1-202ENST00000394092 NFAT5O94916 1531 aa9.01□□□□□ -0.97
SMAD1-202ENST00000394092 SEC24BO95487 1268 aa9□□□□□ -0.97
SMAD1-202ENST00000394092 HOXC9P31274 260 aa9□□□□□ -0.97
SMAD1-202ENST00000394092 BMP2KLQ5H9B9 411 aa9□□□□□ -0.97
SMAD1-202ENST00000394092 ABTB2Q8N961 1025 aa9□□□□□ -0.97
SMAD1-202ENST00000394092 EYA1Q99502 592 aa9□□□□□ -0.97
SMAD1-202ENST00000394092 BABAM1Q9NWV8 329 aa9□□□□□ -0.97
SMAD1-202ENST00000394092 TSPYL4Q9UJ04 414 aa9□□□□□ -0.97
SMAD1-202ENST00000394092 MAP3K5Q99683 1374 aa9□□□□□ -0.97
SMAD1-202ENST00000394092 MTHFSDQ2M296 383 aaKnown RBP9□□□□□ -0.97
SMAD1-202ENST00000394092 LNPKQ9C0E8 428 aa9□□□□□ -0.97
SMAD1-202ENST00000394092 RGS12O14924 1447 aa9□□□□□ -0.97
SMAD1-202ENST00000394092 NPHP4O75161 1426 aaPredicted RBP9□□□□□ -0.97
SMAD1-202ENST00000394092 GNAT3A8MTJ3 354 aa8.99□□□□□ -0.97
SMAD1-202ENST00000394092 SLC4A3P48751 1232 aa8.99□□□□□ -0.97
SMAD1-202ENST00000394092 ANKRD45Q5TZF3 282 aa8.99□□□□□ -0.97
SMAD1-202ENST00000394092 RPAP2Q8IXW5 612 aaPredicted RBP8.99□□□□□ -0.97
SMAD1-202ENST00000394092 KCNH5Q8NCM2 988 aa8.99□□□□□ -0.97
SMAD1-202ENST00000394092 STK31Q9BXU1 1019 aa8.99□□□□□ -0.97
SMAD1-202ENST00000394092 C22orf23Q9BZE7 217 aa8.99□□□□□ -0.97
SMAD1-202ENST00000394092 LMO7Q8WWI1 1683 aa8.99□□□□□ -0.97
SMAD1-202ENST00000394092 MSH6P52701 1360 aa8.99□□□□□ -0.97
SMAD1-202ENST00000394092 MFAP1P55081 439 aaKnown RBP8.98□□□□□ -0.97
SMAD1-202ENST00000394092 NFKBIBQ15653 356 aa8.98□□□□□ -0.97
SMAD1-202ENST00000394092 CHMP4AQ9BY43 222 aa8.98□□□□□ -0.97
SMAD1-202ENST00000394092 PXDNLA1KZ92 1463 aa8.98□□□□□ -0.97
SMAD1-202ENST00000394092 ATP10DQ9P241 1426 aa8.98□□□□□ -0.97
SMAD1-202ENST00000394092 HMMRO75330 724 aa8.97□□□□□ -0.97
SMAD1-202ENST00000394092 CCT4P50991 539 aaKnown RBP8.97□□□□□ -0.97
SMAD1-202ENST00000394092 C14orf37Q86TY3 774 aa8.97□□□□□ -0.97
SMAD1-202ENST00000394092 DNAJC5Q9H3Z4 198 aa8.97□□□□□ -0.97
SMAD1-202ENST00000394092 C1orf115Q9H7X2 142 aa8.97□□□□□ -0.97
SMAD1-202ENST00000394092 SLIT3O75094 1523 aa8.97□□□□□ -0.97
SMAD1-202ENST00000394092 KDM3BQ7LBC6 1761 aa8.97□□□□□ -0.97
SMAD1-202ENST00000394092 ANKRD44Q8N8A2 993 aa8.97□□□□□ -0.97
SMAD1-202ENST00000394092 MED1Q15648 1581 aaPredicted RBP8.97□□□□□ -0.97
SMAD1-202ENST00000394092 CAMTA1Q9Y6Y1 1673 aa8.96□□□□□ -0.97
SMAD1-202ENST00000394092 TRPM3Q9HCF6 1732 aaPredicted RBP8.96□□□□□ -0.97
SMAD1-202ENST00000394092 CCDC30Q5VVM6 783 aa8.96□□□□□ -0.98
SMAD1-202ENST00000394092 IP6K1Q92551 441 aa8.96□□□□□ -0.98
SMAD1-202ENST00000394092 DCTPP1Q9H773 170 aa8.96□□□□□ -0.98
SMAD1-202ENST00000394092 NCAPD2Q15021 1401 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms