RNA–Protein interactions for RNA: ENST00000394053.6

MTHFD2-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD2, Length 4,456 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD2-201ENST00000394053 CPLX1O14810 134 aa12.9□□□□□ -0.35
MTHFD2-201ENST00000394053 GCP02774 474 aa12.9□□□□□ -0.35
MTHFD2-201ENST00000394053 LARP1Q6PKG0 1096 aaKnown RBP12.9□□□□□ -0.35
MTHFD2-201ENST00000394053 SPATA31E1Q6ZUB1 1445 aa12.89□□□□□ -0.35
MTHFD2-201ENST00000394053 MAP4K4O95819 1239 aaPredicted RBP12.89□□□□□ -0.35
MTHFD2-201ENST00000394053 LRRC59Q96AG4 307 aaKnown RBP12.89□□□□□ -0.35
MTHFD2-201ENST00000394053 CHMP4CQ96CF2 233 aa12.89□□□□□ -0.35
MTHFD2-201ENST00000394053 ANXA1P04083 346 aa12.89□□□□□ -0.35
MTHFD2-201ENST00000394053 DNAAF4Q8WXU2 420 aa12.89□□□□□ -0.35
MTHFD2-201ENST00000394053 MLH3Q9UHC1 1453 aa12.89□□□□□ -0.35
MTHFD2-201ENST00000394053 AACSQ86V21 672 aa12.88□□□□□ -0.35
MTHFD2-201ENST00000394053 NGLY1Q96IV0 654 aa12.88□□□□□ -0.35
MTHFD2-201ENST00000394053 EYA1Q99502 592 aa12.88□□□□□ -0.35
MTHFD2-201ENST00000394053 C8orf58Q8NAV2 365 aa12.88□□□□□ -0.35
MTHFD2-201ENST00000394053 ORAI2Q96SN7 254 aa12.88□□□□□ -0.35
MTHFD2-201ENST00000394053 FLT4P35916 1363 aa12.88□□□□□ -0.35
MTHFD2-201ENST00000394053 EXOC5O00471 708 aa12.88□□□□□ -0.35
MTHFD2-201ENST00000394053 AKAP17AQ02040 695 aaKnown RBP12.88□□□□□ -0.35
MTHFD2-201ENST00000394053 MTHFSDQ2M296 383 aaKnown RBP12.88□□□□□ -0.35
MTHFD2-201ENST00000394053 SMC3Q9UQE7 1217 aa12.88□□□□□ -0.35
MTHFD2-201ENST00000394053 SMARCA5O60264 1052 aaPredicted RBP12.87□□□□□ -0.35
MTHFD2-201ENST00000394053 RALYLQ86SE5 291 aaKnown RBP12.87□□□□□ -0.35
MTHFD2-201ENST00000394053 FBXW7Q969H0 707 aa12.87□□□□□ -0.35
MTHFD2-201ENST00000394053 FMNL2Q96PY5 1086 aa12.87□□□□□ -0.35
MTHFD2-201ENST00000394053 PREX2Q70Z35 1606 aa12.87□□□□□ -0.35
MTHFD2-201ENST00000394053 VPS37CA5D8V6 355 aaPredicted RBP12.87□□□□□ -0.35
MTHFD2-201ENST00000394053 CEP126Q9P2H0 1117 aa12.87□□□□□ -0.35
MTHFD2-201ENST00000394053 NPC1L1Q9UHC9 1359 aa12.87□□□□□ -0.35
MTHFD2-201ENST00000394053 PI4KAP2A4QPH2 592 aa12.87□□□□□ -0.35
MTHFD2-201ENST00000394053 MSNP26038 577 aaKnown RBP12.87□□□□□ -0.35
MTHFD2-201ENST00000394053 PI4KAP1Q8N8J0 262 aa12.87□□□□□ -0.35
MTHFD2-201ENST00000394053 MYD88Q99836 296 aa12.87□□□□□ -0.35
MTHFD2-201ENST00000394053 SPINK5Q9NQ38 1064 aaPredicted RBP12.87□□□□□ -0.35
MTHFD2-201ENST00000394053 CCDC158Q5M9N0 1113 aa12.86□□□□□ -0.35
MTHFD2-201ENST00000394053 LRRFIP2Q9Y608 721 aaKnown RBP12.86□□□□□ -0.35
MTHFD2-201ENST00000394053 PTPRCP08575 1304 aa12.86□□□□□ -0.35
MTHFD2-201ENST00000394053 NUTM1Q86Y26 1132 aa12.86□□□□□ -0.35
MTHFD2-201ENST00000394053 MPHOSPH8Q99549 860 aa12.86□□□□□ -0.35
MTHFD2-201ENST00000394053 PTPRTO14522 1441 aa12.86□□□□□ -0.35
MTHFD2-201ENST00000394053 AMOTL1Q8IY63 956 aa12.86□□□□□ -0.35
MTHFD2-201ENST00000394053 HYPKQ9NX55 129 aa12.86□□□□□ -0.35
MTHFD2-201ENST00000394053 TBC1D2BQ9UPU7 963 aa12.86□□□□□ -0.35
MTHFD2-201ENST00000394053 NUCB2P80303 420 aa12.86□□□□□ -0.35
MTHFD2-201ENST00000394053 IGHDP01880 384 aa12.85□□□□□ -0.35
MTHFD2-201ENST00000394053 RASSF8Q8NHQ8 419 aa12.85□□□□□ -0.35
MTHFD2-201ENST00000394053 HIP1O00291 1037 aa12.85□□□□□ -0.35
MTHFD2-201ENST00000394053 CCDC34Q96HJ3 373 aa12.85□□□□□ -0.35
MTHFD2-201ENST00000394053 UGGT1Q9NYU2 1555 aa12.85□□□□□ -0.35
MTHFD2-201ENST00000394053 NFXL1Q6ZNB6 911 aa12.85□□□□□ -0.35
MTHFD2-201ENST00000394053 TSPYL6Q8N831 410 aa12.85□□□□□ -0.35
MTHFD2-201ENST00000394053 KIF1BPQ96EK5 621 aa12.85□□□□□ -0.35
MTHFD2-201ENST00000394053 KRT24Q2M2I5 525 aa12.84□□□□□ -0.35
MTHFD2-201ENST00000394053 TRPM2O94759 1503 aa12.84□□□□□ -0.35
MTHFD2-201ENST00000394053 RABEP1Q15276 862 aa12.84□□□□□ -0.35
MTHFD2-201ENST00000394053 RSPH6AQ9H0K4 717 aa12.84□□□□□ -0.35
MTHFD2-201ENST00000394053 SLC39A6Q13433 755 aa12.84□□□□□ -0.35
MTHFD2-201ENST00000394053 BICDL1Q6ZP65 573 aa12.84□□□□□ -0.35
MTHFD2-201ENST00000394053 PSMA5P28066 241 aa12.84□□□□□ -0.35
MTHFD2-201ENST00000394053 SKOR2Q2VWA4 1001 aaPredicted RBP12.84□□□□□ -0.35
MTHFD2-201ENST00000394053 TTC39AQ5SRH9 613 aa12.84□□□□□ -0.35
MTHFD2-201ENST00000394053 HOXC9P31274 260 aa12.83□□□□□ -0.36
MTHFD2-201ENST00000394053 FKBP4Q02790 459 aaKnown RBP eCLIP12.83□□□□□ -0.365e-6■■■□□ 17
MTHFD2-201ENST00000394053 NAP1L5Q96NT1 182 aaPredicted RBP12.83□□□□□ -0.36
MTHFD2-201ENST00000394053 ZBTB3Q9H5J0 574 aa12.83□□□□□ -0.36
MTHFD2-201ENST00000394053 PCDHB15Q9Y5E8 787 aa12.83□□□□□ -0.36
MTHFD2-201ENST00000394053 TNNQ9UQP3 1299 aa12.83□□□□□ -0.36
MTHFD2-201ENST00000394053 PLA2R1Q13018 1463 aa12.83□□□□□ -0.36
MTHFD2-201ENST00000394053 A0A087WZG4 1122 aa12.83□□□□□ -0.36
MTHFD2-201ENST00000394053 RAD21O60216 631 aa12.83□□□□□ -0.36
MTHFD2-201ENST00000394053 VAMP4O75379 141 aa12.83□□□□□ -0.36
MTHFD2-201ENST00000394053 GSE1Q14687 1217 aa12.83□□□□□ -0.36
MTHFD2-201ENST00000394053 NFKBIBQ15653 356 aa12.83□□□□□ -0.36
MTHFD2-201ENST00000394053 ARHGAP45Q92619 1136 aa12.83□□□□□ -0.36
MTHFD2-201ENST00000394053 MAP3K2Q9Y2U5 619 aa12.83□□□□□ -0.36
MTHFD2-201ENST00000394053 PHF14O94880 888 aa12.82□□□□□ -0.36
MTHFD2-201ENST00000394053 CWC27Q6UX04 472 aaKnown RBP12.82□□□□□ -0.36
MTHFD2-201ENST00000394053 ERICH2A1L162 156 aa12.82□□□□□ -0.36
MTHFD2-201ENST00000394053 MX1P20591 662 aa12.82□□□□□ -0.36
MTHFD2-201ENST00000394053 ZFYVE9O95405 1425 aa12.82□□□□□ -0.36
MTHFD2-201ENST00000394053 EDC4Q6P2E9 1401 aaKnown RBP12.82□□□□□ -0.36
MTHFD2-201ENST00000394053 CFAP74Q9C0B2 1584 aa12.82□□□□□ -0.36
MTHFD2-201ENST00000394053 TRIM29Q14134 588 aa12.82□□□□□ -0.36
MTHFD2-201ENST00000394053 AKAP4Q5JQC9 854 aa12.82□□□□□ -0.36
MTHFD2-201ENST00000394053 ZCRB1Q8TBF4 217 aaKnown RBP12.82□□□□□ -0.36
MTHFD2-201ENST00000394053 IP6K1Q92551 441 aa12.82□□□□□ -0.36
MTHFD2-201ENST00000394053 TSPOAP1O95153 1857 aa12.82□□□□□ -0.36
MTHFD2-201ENST00000394053 IL13P35225 146 aa12.82□□□□□ -0.36
MTHFD2-201ENST00000394053 ATP5J2-PTCD1G3V325 749 aa12.81□□□□□ -0.36
MTHFD2-201ENST00000394053 SNRPA1P09661 255 aaKnown RBP12.81□□□□□ -0.36
MTHFD2-201ENST00000394053 FOSBP53539 338 aa12.81□□□□□ -0.36
MTHFD2-201ENST00000394053 KLHL34Q8N239 644 aa12.81□□□□□ -0.36
MTHFD2-201ENST00000394053 CDC42BPAQ5VT25 1732 aa12.81□□□□□ -0.36
MTHFD2-201ENST00000394053 PLEKHG3A1L390 1219 aa12.81□□□□□ -0.36
MTHFD2-201ENST00000394053 MEIS3Q99687 375 aa12.81□□□□□ -0.36
MTHFD2-201ENST00000394053 CHPF2Q9P2E5 772 aa12.81□□□□□ -0.36
MTHFD2-201ENST00000394053 PHF23Q9BUL5 403 aaPredicted RBP12.81□□□□□ -0.36
MTHFD2-201ENST00000394053 RLBP1P12271 317 aa12.8□□□□□ -0.36
MTHFD2-201ENST00000394053 SBNO2Q9Y2G9 1366 aa12.8□□□□□ -0.36
MTHFD2-201ENST00000394053 METP08581 1390 aa12.8□□□□□ -0.36
MTHFD2-201ENST00000394053 MAGI2Q86UL8 1455 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms