RNA–Protein interactions for RNA: ENST00000392557.8

BRF1-204, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 1 (best) BASIC

Gene BRF1, Length 3,579 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-204ENST00000392557 USHBP1Q8N6Y0 703 aa13.47□□□□□ -0.25
BRF1-204ENST00000392557 MRE11P49959 708 aa13.47□□□□□ -0.25
BRF1-204ENST00000392557 PSME1Q06323 249 aa13.47□□□□□ -0.25
BRF1-204ENST00000392557 CFAP44Q96MT7 982 aa13.47□□□□□ -0.25
BRF1-204ENST00000392557 GOLGA6L22H0YM25 854 aa13.47□□□□□ -0.25
BRF1-204ENST00000392557 GRPEL1Q9HAV7 217 aa13.46□□□□□ -0.25
BRF1-204ENST00000392557 PHF8Q9UPP1 1060 aa13.46□□□□□ -0.25
BRF1-204ENST00000392557 SLIT1O75093 1534 aa13.46□□□□□ -0.25
BRF1-204ENST00000392557 TPRNQ4KMQ1 711 aa13.46□□□□□ -0.25
BRF1-204ENST00000392557 RIMS1Q86UR5 1692 aaKnown RBP13.46□□□□□ -0.25
BRF1-204ENST00000392557 ARHGAP23Q9P227 1491 aa13.46□□□□□ -0.25
BRF1-204ENST00000392557 TTC21AQ8NDW8 1320 aa13.46□□□□□ -0.26
BRF1-204ENST00000392557 PKNOX2Q96KN3 472 aa13.46□□□□□ -0.26
BRF1-204ENST00000392557 MON2Q7Z3U7 1717 aa13.45□□□□□ -0.26
BRF1-204ENST00000392557 CHD1LQ86WJ1 897 aa13.45□□□□□ -0.26
BRF1-204ENST00000392557 EYA1Q99502 592 aa13.45□□□□□ -0.26
BRF1-204ENST00000392557 OVOS2A0A0J9YW53 1432 aa13.45□□□□□ -0.26
BRF1-204ENST00000392557 OVOS2Q6IE36 1432 aa13.45□□□□□ -0.26
BRF1-204ENST00000392557 NECTIN2Q92692 538 aa13.45□□□□□ -0.26
BRF1-204ENST00000392557 TNPO1Q92973 898 aaKnown RBP13.45□□□□□ -0.26
BRF1-204ENST00000392557 DIP2AQ14689 1571 aa13.44□□□□□ -0.26
BRF1-204ENST00000392557 ALDH1L2Q3SY69 923 aa13.44□□□□□ -0.26
BRF1-204ENST00000392557 RGPD8O14715 1765 aaPredicted RBP13.44□□□□□ -0.26
BRF1-204ENST00000392557 MTHFSDQ2M296 383 aaKnown RBP13.44□□□□□ -0.26
BRF1-204ENST00000392557 RBM42Q9BTD8 480 aaKnown RBP13.44□□□□□ -0.26
BRF1-204ENST00000392557 MRPL50Q8N5N7 158 aaKnown RBP13.43□□□□□ -0.26
BRF1-204ENST00000392557 AKAP12Q02952 1782 aa13.43□□□□□ -0.26
BRF1-204ENST00000392557 HDAC1Q13547 482 aaPredicted RBP13.43□□□□□ -0.26
BRF1-204ENST00000392557 PTCH1Q13635 1447 aa13.43□□□□□ -0.26
BRF1-204ENST00000392557 CEP170BQ9Y4F5 1589 aaPredicted RBP13.43□□□□□ -0.26
BRF1-204ENST00000392557 GLIPR1L2Q4G1C9 344 aa13.43□□□□□ -0.26
BRF1-204ENST00000392557 TSPYL4Q9UJ04 414 aa13.43□□□□□ -0.26
BRF1-204ENST00000392557 DDX49Q9Y6V7 483 aaKnown RBP13.43□□□□□ -0.26
BRF1-204ENST00000392557 FLT4P35916 1363 aa13.43□□□□□ -0.26
BRF1-204ENST00000392557 SETD1BQ9UPS6 1966 aaKnown RBP13.42□□□□□ -0.26
BRF1-204ENST00000392557 ORAI2Q96SN7 254 aa13.42□□□□□ -0.26
BRF1-204ENST00000392557 ZNF853P0CG23 659 aa13.41□□□□□ -0.26
BRF1-204ENST00000392557 PROSER2Q86WR7 435 aaPredicted RBP13.41□□□□□ -0.26
BRF1-204ENST00000392557 ZBTB40Q9NUA8 1239 aa13.41□□□□□ -0.26
BRF1-204ENST00000392557 HOXC9P31274 260 aa13.41□□□□□ -0.26
BRF1-204ENST00000392557 FOXD4L5Q5VV16 416 aaPredicted RBP13.41□□□□□ -0.26
BRF1-204ENST00000392557 SMC5Q8IY18 1101 aa13.41□□□□□ -0.26
BRF1-204ENST00000392557 FOXD4L4Q8WXT5 416 aaPredicted RBP13.41□□□□□ -0.26
BRF1-204ENST00000392557 HSP90AA2PQ14568 343 aaPredicted RBP13.4□□□□□ -0.26
BRF1-204ENST00000392557 SLC4A10Q6U841 1118 aa13.4□□□□□ -0.26
BRF1-204ENST00000392557 SBNO1A3KN83 1393 aa13.4□□□□□ -0.26
BRF1-204ENST00000392557 ESPNB1AK53 854 aa13.4□□□□□ -0.26
BRF1-204ENST00000392557 NUCB1Q02818 461 aa13.4□□□□□ -0.26
BRF1-204ENST00000392557 USP31Q70CQ4 1352 aa13.39□□□□□ -0.27
BRF1-204ENST00000392557 SSFA2P28290 1259 aa13.38□□□□□ -0.27
BRF1-204ENST00000392557 SLC4A2P04920 1241 aa13.38□□□□□ -0.27
BRF1-204ENST00000392557 TBC1D9Q6ZT07 1266 aa13.38□□□□□ -0.27
BRF1-204ENST00000392557 MCTP1Q6DN14 999 aa13.37□□□□□ -0.27
BRF1-204ENST00000392557 API5Q9BZZ5 524 aaKnown RBP13.37□□□□□ -0.27
BRF1-204ENST00000392557 CHMP4BQ9H444 224 aaKnown RBP13.37□□□□□ -0.27
BRF1-204ENST00000392557 FSD2A1L4K1 749 aa13.37□□□□□ -0.27
BRF1-204ENST00000392557 K7ELQ4 463 aaPredicted RBP13.37□□□□□ -0.27
BRF1-204ENST00000392557 GAS2L2Q8NHY3 880 aa13.37□□□□□ -0.27
BRF1-204ENST00000392557 SSH2Q76I76 1423 aa13.37□□□□□ -0.27
BRF1-204ENST00000392557 DLG5Q8TDM6 1919 aa13.37□□□□□ -0.27
BRF1-204ENST00000392557 CHL1O00533 1208 aa13.36□□□□□ -0.27
BRF1-204ENST00000392557 VSIG10Q8N0Z9 540 aa13.36□□□□□ -0.27
BRF1-204ENST00000392557 LRRC59Q96AG4 307 aaKnown RBP13.36□□□□□ -0.27
BRF1-204ENST00000392557 PEAK1Q9H792 1746 aa13.36□□□□□ -0.27
BRF1-204ENST00000392557 CD2BP2O95400 341 aaKnown RBP13.36□□□□□ -0.27
BRF1-204ENST00000392557 CLCN1P35523 988 aa13.36□□□□□ -0.27
BRF1-204ENST00000392557 TOPAZ1Q8N9V7 1692 aa13.36□□□□□ -0.27
BRF1-204ENST00000392557 ZBTB7BO15156 539 aaPredicted RBP13.36□□□□□ -0.27
BRF1-204ENST00000392557 MSNP26038 577 aaKnown RBP13.36□□□□□ -0.27
BRF1-204ENST00000392557 SKOR2Q2VWA4 1001 aaPredicted RBP13.36□□□□□ -0.27
BRF1-204ENST00000392557 F6X3S4 739 aa13.35□□□□□ -0.27
BRF1-204ENST00000392557 NOL8Q76FK4 1167 aaKnown RBP13.35□□□□□ -0.27
BRF1-204ENST00000392557 KLHL34Q8N239 644 aa13.35□□□□□ -0.27
BRF1-204ENST00000392557 NASPP49321 788 aaPredicted RBP13.35□□□□□ -0.27
BRF1-204ENST00000392557 BMP2KLQ5H9B9 411 aa13.35□□□□□ -0.27
BRF1-204ENST00000392557 GAS2L3Q86XJ1 694 aa13.35□□□□□ -0.27
BRF1-204ENST00000392557 DDX17Q92841 729 aaKnown RBP13.35□□□□□ -0.27
BRF1-204ENST00000392557 NRKQ7Z2Y5 1582 aa13.35□□□□□ -0.27
BRF1-204ENST00000392557 GCC1Q96CN9 775 aa13.35□□□□□ -0.27
BRF1-204ENST00000392557 PIK3R4Q99570 1358 aa13.34□□□□□ -0.27
BRF1-204ENST00000392557 GNAT3A8MTJ3 354 aa13.34□□□□□ -0.27
BRF1-204ENST00000392557 FOXD4L6Q3SYB3 417 aaPredicted RBP13.34□□□□□ -0.27
BRF1-204ENST00000392557 FOXD4L3Q6VB84 417 aaPredicted RBP13.34□□□□□ -0.27
BRF1-204ENST00000392557 ARHGEF10O15013 1369 aa13.34□□□□□ -0.27
BRF1-204ENST00000392557 IGSF1Q8N6C5 1336 aa13.34□□□□□ -0.27
BRF1-204ENST00000392557 CDC45O75419 566 aa13.34□□□□□ -0.27
BRF1-204ENST00000392557 HSPA2P54652 639 aa13.34□□□□□ -0.27
BRF1-204ENST00000392557 CAVIN1Q6NZI2 390 aaKnown RBP13.34□□□□□ -0.27
BRF1-204ENST00000392557 NPHP4O75161 1426 aaPredicted RBP13.34□□□□□ -0.27
BRF1-204ENST00000392557 RBM25P49756 843 aaKnown RBP13.33□□□□□ -0.27
BRF1-204ENST00000392557 ARID3AQ99856 593 aa13.33□□□□□ -0.27
BRF1-204ENST00000392557 ANKARQ7Z5J8 1434 aa13.33□□□□□ -0.28
BRF1-204ENST00000392557 HAP1P54257 671 aaPredicted RBP13.33□□□□□ -0.28
BRF1-204ENST00000392557 ZC3H6P61129 1189 aaKnown RBP13.33□□□□□ -0.28
BRF1-204ENST00000392557 CASC1Q6TDU7 716 aa13.33□□□□□ -0.28
BRF1-204ENST00000392557 G2E3Q7L622 706 aa13.33□□□□□ -0.28
BRF1-204ENST00000392557 ARHGAP45Q92619 1136 aa13.33□□□□□ -0.28
BRF1-204ENST00000392557 STK31Q9BXU1 1019 aa13.33□□□□□ -0.28
BRF1-204ENST00000392557 NBPF6Q5VWK0 638 aa13.32□□□□□ -0.28
BRF1-204ENST00000392557 NBPF4Q96M43 638 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms