RNA–Protein interactions for RNA: ENST00000384709.1

RNU6-541P-201, Transcript of RNA, U6 small nuclear 541, pseudogene, humanhuman

BASIC

Gene RNU6-541P, Length 110 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-541P-201ENST00000384709 LINC00528Q8N1L1 170 aa5□□□□□ -1.61
RNU6-541P-201ENST00000384709 ZFP42Q96MM3 310 aa5□□□□□ -1.61
RNU6-541P-201ENST00000384709 SOS2Q07890 1332 aaPredicted RBP4.99□□□□□ -1.61
RNU6-541P-201ENST00000384709 C11orf95C9JLR9 678 aaPredicted RBP4.99□□□□□ -1.61
RNU6-541P-201ENST00000384709 TERTO14746 1132 aaKnown RBP4.99□□□□□ -1.61
RNU6-541P-201ENST00000384709 BMP1P13497 986 aa4.99□□□□□ -1.61
RNU6-541P-201ENST00000384709 PTGIRP43119 386 aa4.99□□□□□ -1.61
RNU6-541P-201ENST00000384709 CBLBQ13191 982 aa4.99□□□□□ -1.61
RNU6-541P-201ENST00000384709 TSGA10IPQ3SY00 556 aa4.99□□□□□ -1.61
RNU6-541P-201ENST00000384709 CDCA7Q9BWT1 371 aaPredicted RBP4.99□□□□□ -1.61
RNU6-541P-201ENST00000384709 ZMYND15Q9H091 742 aa4.99□□□□□ -1.61
RNU6-541P-201ENST00000384709 OSBPL3Q9H4L5 887 aa4.99□□□□□ -1.61
RNU6-541P-201ENST00000384709 SCTRP47872 440 aa4.98□□□□□ -1.61
RNU6-541P-201ENST00000384709 SCARF1Q14162 830 aa4.98□□□□□ -1.61
RNU6-541P-201ENST00000384709 SLFNL1Q499Z3 407 aa4.98□□□□□ -1.61
RNU6-541P-201ENST00000384709 RNF135Q8IUD6 432 aa4.98□□□□□ -1.61
RNU6-541P-201ENST00000384709 PLEKHM2Q8IWE5 1019 aa4.98□□□□□ -1.61
RNU6-541P-201ENST00000384709 PLPP7Q8NBV4 271 aa4.98□□□□□ -1.61
RNU6-541P-201ENST00000384709 UCN2Q96RP3 112 aa4.98□□□□□ -1.61
RNU6-541P-201ENST00000384709 HRH3Q9Y5N1 445 aa4.98□□□□□ -1.61
RNU6-541P-201ENST00000384709 WASLO00401 505 aaPredicted RBP4.97□□□□□ -1.61
RNU6-541P-201ENST00000384709 GSK3AP49840 483 aa4.97□□□□□ -1.61
RNU6-541P-201ENST00000384709 HDGFL1Q5TGJ6 251 aa4.97□□□□□ -1.61
RNU6-541P-201ENST00000384709 CYP2U1Q7Z449 544 aa4.97□□□□□ -1.61
RNU6-541P-201ENST00000384709 PURBQ96QR8 312 aaKnown RBP4.97□□□□□ -1.61
RNU6-541P-201ENST00000384709 PCDHB11Q9Y5F2 797 aa4.97□□□□□ -1.61
RNU6-541P-201ENST00000384709 BTBD11A6QL63 1104 aa4.96□□□□□ -1.62
RNU6-541P-201ENST00000384709 PIK3CDO00329 1044 aa4.96□□□□□ -1.62
RNU6-541P-201ENST00000384709 GNRH1P01148 92 aa4.96□□□□□ -1.62
RNU6-541P-201ENST00000384709 SNRPBP14678 240 aaKnown RBP4.96□□□□□ -1.62
RNU6-541P-201ENST00000384709 GPC1P35052 558 aa4.96□□□□□ -1.62
RNU6-541P-201ENST00000384709 RNF144AP50876 292 aaPredicted RBP4.96□□□□□ -1.62
RNU6-541P-201ENST00000384709 USP4Q13107 963 aa4.96□□□□□ -1.62
RNU6-541P-201ENST00000384709 NPAS3Q8IXF0 933 aa4.96□□□□□ -1.62
RNU6-541P-201ENST00000384709 GLMNQ92990 594 aa4.96□□□□□ -1.62
RNU6-541P-201ENST00000384709 SIRT1Q96EB6 747 aa4.96□□□□□ -1.62
RNU6-541P-201ENST00000384709 CYLDQ9NQC7 956 aa4.96□□□□□ -1.62
RNU6-541P-201ENST00000384709 DOLKQ9UPQ8 538 aa4.96□□□□□ -1.62
RNU6-541P-201ENST00000384709 ATP5J2-PTCD1G3V325 749 aa4.95□□□□□ -1.62
RNU6-541P-201ENST00000384709 ATP9BO43861 1147 aa4.95□□□□□ -1.62
RNU6-541P-201ENST00000384709 UPP2O95045 317 aa4.95□□□□□ -1.62
RNU6-541P-201ENST00000384709 RAB15P59190 212 aa4.95□□□□□ -1.62
RNU6-541P-201ENST00000384709 KCNMA1Q12791 1236 aa4.95□□□□□ -1.62
RNU6-541P-201ENST00000384709 FOXD4L5Q5VV16 416 aaPredicted RBP4.95□□□□□ -1.62
RNU6-541P-201ENST00000384709 XAGE2Q96GT9 111 aa4.95□□□□□ -1.62
RNU6-541P-201ENST00000384709 KRTAP4-12Q9BQ66 201 aa4.95□□□□□ -1.62
RNU6-541P-201ENST00000384709 BMP2P12643 396 aa4.94□□□□□ -1.62
RNU6-541P-201ENST00000384709 CLN3Q13286 438 aa4.94□□□□□ -1.62
RNU6-541P-201ENST00000384709 AGBL1Q96MI9 1066 aa4.94□□□□□ -1.62
RNU6-541P-201ENST00000384709 GRIP2Q9C0E4 1043 aa4.94□□□□□ -1.62
RNU6-541P-201ENST00000384709 PCDHGA11Q9Y5H2 935 aa4.94□□□□□ -1.62
RNU6-541P-201ENST00000384709 A0A1W2PRU2 124 aa4.93□□□□□ -1.62
RNU6-541P-201ENST00000384709 TTLL8A6PVC2 850 aa4.93□□□□□ -1.62
RNU6-541P-201ENST00000384709 SPATA31C2B4DYI2 1134 aa4.93□□□□□ -1.62
RNU6-541P-201ENST00000384709 MYCP01106 439 aaPredicted RBP4.93□□□□□ -1.62
RNU6-541P-201ENST00000384709 SKIP12755 728 aa4.93□□□□□ -1.62
RNU6-541P-201ENST00000384709 CTSOP43234 321 aaPredicted RBP4.93□□□□□ -1.62
RNU6-541P-201ENST00000384709 RELBQ01201 579 aa4.93□□□□□ -1.62
RNU6-541P-201ENST00000384709 WDR44Q5JSH3 913 aa4.93□□□□□ -1.62
RNU6-541P-201ENST00000384709 TBC1D9Q6ZT07 1266 aa4.93□□□□□ -1.62
RNU6-541P-201ENST00000384709 ERICH6Q7L0X2 663 aa4.93□□□□□ -1.62
RNU6-541P-201ENST00000384709 RNF217Q8TC41 542 aa4.93□□□□□ -1.62
RNU6-541P-201ENST00000384709 ESYT1Q9BSJ8 1104 aa4.93□□□□□ -1.62
RNU6-541P-201ENST00000384709 DNMT3LQ9UJW3 386 aa4.93□□□□□ -1.62
RNU6-541P-201ENST00000384709 USP17L5A8MUK1 530 aa4.92□□□□□ -1.62
RNU6-541P-201ENST00000384709 ZBTB7BO15156 539 aaPredicted RBP4.92□□□□□ -1.62
RNU6-541P-201ENST00000384709 DKK1O94907 266 aa4.92□□□□□ -1.62
RNU6-541P-201ENST00000384709 IL2RAP01589 272 aa4.92□□□□□ -1.62
RNU6-541P-201ENST00000384709 SCNN1DP51172 638 aa4.92□□□□□ -1.62
RNU6-541P-201ENST00000384709 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.92□□□□□ -1.62
RNU6-541P-201ENST00000384709 EML3Q32P44 896 aa4.92□□□□□ -1.62
RNU6-541P-201ENST00000384709 C6orf118Q5T5N4 469 aa4.92□□□□□ -1.62
RNU6-541P-201ENST00000384709 INSM2Q96T92 566 aaPredicted RBP4.92□□□□□ -1.62
RNU6-541P-201ENST00000384709 PPP1R12CQ9BZL4 782 aa4.92□□□□□ -1.62
RNU6-541P-201ENST00000384709 FHDC1Q9C0D6 1143 aaPredicted RBP4.92□□□□□ -1.62
RNU6-541P-201ENST00000384709 USP17L3A6NCW0 530 aa4.91□□□□□ -1.62
RNU6-541P-201ENST00000384709 USP17L4A6NCW7 530 aa4.91□□□□□ -1.62
RNU6-541P-201ENST00000384709 PALM3A6NDB9 673 aaPredicted RBP4.91□□□□□ -1.62
RNU6-541P-201ENST00000384709 TMEM229AB2RXF0 380 aa4.91□□□□□ -1.62
RNU6-541P-201ENST00000384709 NCOA4Q13772 614 aa4.91□□□□□ -1.62
RNU6-541P-201ENST00000384709 MTFR1Q15390 333 aa4.91□□□□□ -1.62
RNU6-541P-201ENST00000384709 OXLD1Q5BKU9 147 aa4.91□□□□□ -1.62
RNU6-541P-201ENST00000384709 ESCO1Q5FWF5 840 aa4.91□□□□□ -1.62
RNU6-541P-201ENST00000384709 USP17L2Q6R6M4 530 aa4.91□□□□□ -1.62
RNU6-541P-201ENST00000384709 USP17L1Q7RTZ2 530 aa4.91□□□□□ -1.62
RNU6-541P-201ENST00000384709 TMEM151AQ8N4L1 468 aa4.91□□□□□ -1.62
RNU6-541P-201ENST00000384709 CALR3Q96L12 384 aaKnown RBP4.91□□□□□ -1.62
RNU6-541P-201ENST00000384709 SLC4A9Q96Q91 983 aa4.91□□□□□ -1.62
RNU6-541P-201ENST00000384709 KRTAP4-7Q9BYR0 210 aa4.91□□□□□ -1.62
RNU6-541P-201ENST00000384709 ZNF395Q9H8N7 513 aaPredicted RBP4.91□□□□□ -1.62
RNU6-541P-201ENST00000384709 ETNK1Q9HBU6 452 aa4.91□□□□□ -1.62
RNU6-541P-201ENST00000384709 NXF1Q9UBU9 619 aaKnown RBP4.91□□□□□ -1.62
RNU6-541P-201ENST00000384709 NOD1Q9Y239 953 aa4.91□□□□□ -1.62
RNU6-541P-201ENST00000384709 MAFBQ9Y5Q3 323 aaPredicted RBP4.91□□□□□ -1.62
RNU6-541P-201ENST00000384709 SLC35F4A4IF30 521 aa4.9□□□□□ -1.63
RNU6-541P-201ENST00000384709 M0R2N6 131 aa4.9□□□□□ -1.63
RNU6-541P-201ENST00000384709 INHAP05111 366 aa4.9□□□□□ -1.63
RNU6-541P-201ENST00000384709 VSIG8P0DPA2 414 aa4.9□□□□□ -1.63
RNU6-541P-201ENST00000384709 SRPK2P78362 688 aaKnown RBP4.9□□□□□ -1.63
RNU6-541P-201ENST00000384709 CFAP70Q5T0N1 1121 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms