RNA–Protein interactions for RNA: ENST00000383898.1

RNU6-1-201, Transcript of RNA, U6 small nuclear 1, humanhuman

BASIC

Gene RNU6-1, Length 107 nt, Biotype snRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1-201ENST00000383898 USP17L4A6NCW7 530 aa5.4□□□□□ -1.54
RNU6-1-201ENST00000383898 ATP5J2-PTCD1G3V325 749 aa5.4□□□□□ -1.54
RNU6-1-201ENST00000383898 PIK3CDO00329 1044 aa5.4□□□□□ -1.54
RNU6-1-201ENST00000383898 TERTO14746 1132 aaKnown RBP5.4□□□□□ -1.54
RNU6-1-201ENST00000383898 PPP1R15AO75807 674 aaPredicted RBP5.4□□□□□ -1.54
RNU6-1-201ENST00000383898 ZIC2O95409 532 aaPredicted RBP5.4□□□□□ -1.54
RNU6-1-201ENST00000383898 LMOD1P29536 600 aaPredicted RBP5.4□□□□□ -1.54
RNU6-1-201ENST00000383898 SMCPP49901 116 aaPredicted RBP5.4□□□□□ -1.54
RNU6-1-201ENST00000383898 WDR4P57081 412 aaKnown RBP5.4□□□□□ -1.54
RNU6-1-201ENST00000383898 USP17L2Q6R6M4 530 aa5.4□□□□□ -1.54
RNU6-1-201ENST00000383898 USP17L1Q7RTZ2 530 aa5.4□□□□□ -1.54
RNU6-1-201ENST00000383898 HPS1Q92902 700 aa5.4□□□□□ -1.54
RNU6-1-201ENST00000383898 KLF16Q9BXK1 252 aaPredicted RBP5.4□□□□□ -1.54
RNU6-1-201ENST00000383898 TIMP2P16035 220 aa5.39□□□□□ -1.55
RNU6-1-201ENST00000383898 ATP1A2P50993 1020 aa5.39□□□□□ -1.55
RNU6-1-201ENST00000383898 NCOA4Q13772 614 aa5.39□□□□□ -1.55
RNU6-1-201ENST00000383898 CFAP70Q5T0N1 1121 aa5.39□□□□□ -1.55
RNU6-1-201ENST00000383898 CYP2U1Q7Z449 544 aa5.39□□□□□ -1.55
RNU6-1-201ENST00000383898 ZNF784Q8NCA9 323 aaPredicted RBP5.39□□□□□ -1.55
RNU6-1-201ENST00000383898 KRTAP4-8Q9BYQ9 185 aa5.39□□□□□ -1.55
RNU6-1-201ENST00000383898 VRTNQ9H8Y1 702 aa5.39□□□□□ -1.55
RNU6-1-201ENST00000383898 TMPRSS4Q9NRS4 437 aa5.39□□□□□ -1.55
RNU6-1-201ENST00000383898 CAPN5O15484 640 aaPredicted RBP5.38□□□□□ -1.55
RNU6-1-201ENST00000383898 LILRA1O75019 489 aa5.38□□□□□ -1.55
RNU6-1-201ENST00000383898 TSGA10IPQ3SY00 556 aa5.38□□□□□ -1.55
RNU6-1-201ENST00000383898 OXLD1Q5BKU9 147 aa5.38□□□□□ -1.55
RNU6-1-201ENST00000383898 Q6ZVU0 165 aa5.38□□□□□ -1.55
RNU6-1-201ENST00000383898 ITPKCQ96DU7 683 aa5.38□□□□□ -1.55
RNU6-1-201ENST00000383898 CDCA7Q9BWT1 371 aaPredicted RBP5.38□□□□□ -1.55
RNU6-1-201ENST00000383898 CYLDQ9NQC7 956 aa5.38□□□□□ -1.55
RNU6-1-201ENST00000383898 MKRN1Q9UHC7 482 aaKnown RBP5.38□□□□□ -1.55
RNU6-1-201ENST00000383898 ACIN1Q9UKV3 1341 aaKnown RBP5.38□□□□□ -1.55
RNU6-1-201ENST00000383898 UPP2O95045 317 aa5.37□□□□□ -1.55
RNU6-1-201ENST00000383898 GNRH1P01148 92 aa5.37□□□□□ -1.55
RNU6-1-201ENST00000383898 LARP1Q6PKG0 1096 aaKnown RBP5.37□□□□□ -1.55
RNU6-1-201ENST00000383898 DEPDC4Q8N2C3 294 aa5.37□□□□□ -1.55
RNU6-1-201ENST00000383898 LARGE2Q8N3Y3 721 aa5.37□□□□□ -1.55
RNU6-1-201ENST00000383898 ZSCAN1Q8NBB4 408 aa5.37□□□□□ -1.55
RNU6-1-201ENST00000383898 PBXIP1Q96AQ6 731 aa5.37□□□□□ -1.55
RNU6-1-201ENST00000383898 TSEN34Q9BSV6 310 aaKnown RBP5.37□□□□□ -1.55
RNU6-1-201ENST00000383898 RBM19Q9Y4C8 960 aaKnown RBP5.37□□□□□ -1.55
RNU6-1-201ENST00000383898 FAM196BA6NMK8 535 aa5.36□□□□□ -1.55
RNU6-1-201ENST00000383898 AXIN1O15169 862 aa5.36□□□□□ -1.55
RNU6-1-201ENST00000383898 ADH1AP07327 375 aa5.36□□□□□ -1.55
RNU6-1-201ENST00000383898 RFX1P22670 979 aa5.36□□□□□ -1.55
RNU6-1-201ENST00000383898 ESCO1Q5FWF5 840 aa5.36□□□□□ -1.55
RNU6-1-201ENST00000383898 KANK4Q5T7N3 995 aaPredicted RBP5.36□□□□□ -1.55
RNU6-1-201ENST00000383898 MEIOBQ8N635 442 aa5.36□□□□□ -1.55
RNU6-1-201ENST00000383898 OSBPL3Q9H4L5 887 aa5.36□□□□□ -1.55
RNU6-1-201ENST00000383898 ZFAND3Q9H8U3 227 aa5.36□□□□□ -1.55
RNU6-1-201ENST00000383898 RASA1P20936 1047 aa5.35□□□□□ -1.55
RNU6-1-201ENST00000383898 ADD1P35611 737 aaKnown RBP5.35□□□□□ -1.55
RNU6-1-201ENST00000383898 SCTRP47872 440 aa5.35□□□□□ -1.55
RNU6-1-201ENST00000383898 GTF2IP78347 998 aa5.35□□□□□ -1.55
RNU6-1-201ENST00000383898 SCARF1Q14162 830 aa5.35□□□□□ -1.55
RNU6-1-201ENST00000383898 XP32Q5T750 250 aa5.35□□□□□ -1.55
RNU6-1-201ENST00000383898 ARID3AQ99856 593 aa5.35□□□□□ -1.55
RNU6-1-201ENST00000383898 DNAAF2Q9NVR5 837 aaKnown RBP5.35□□□□□ -1.55
RNU6-1-201ENST00000383898 PCDHGA11Q9Y5H2 935 aa5.35□□□□□ -1.55
RNU6-1-201ENST00000383898 WASLO00401 505 aaPredicted RBP5.34□□□□□ -1.55
RNU6-1-201ENST00000383898 ATG7O95352 703 aa5.34□□□□□ -1.55
RNU6-1-201ENST00000383898 PTGIRP43119 386 aa5.34□□□□□ -1.55
RNU6-1-201ENST00000383898 SRPK2P78362 688 aaKnown RBP5.34□□□□□ -1.55
RNU6-1-201ENST00000383898 PDE4CQ08493 712 aa5.34□□□□□ -1.55
RNU6-1-201ENST00000383898 CBLBQ13191 982 aa5.34□□□□□ -1.55
RNU6-1-201ENST00000383898 ELOAQ14241 798 aaKnown RBP5.34□□□□□ -1.55
RNU6-1-201ENST00000383898 OGFOD1Q8N543 542 aa5.34□□□□□ -1.55
RNU6-1-201ENST00000383898 BACH1O14867 736 aa5.33□□□□□ -1.56
RNU6-1-201ENST00000383898 ZBTB7BO15156 539 aaPredicted RBP5.33□□□□□ -1.56
RNU6-1-201ENST00000383898 PSME1Q06323 249 aa5.33□□□□□ -1.56
RNU6-1-201ENST00000383898 MRPL14Q6P1L8 145 aaKnown RBP5.33□□□□□ -1.56
RNU6-1-201ENST00000383898 KCTD17Q8N5Z5 321 aa5.33□□□□□ -1.56
RNU6-1-201ENST00000383898 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP5.32□□□□□ -1.56
RNU6-1-201ENST00000383898 KRTAP9-1A8MXZ3 250 aaPredicted RBP5.32□□□□□ -1.56
RNU6-1-201ENST00000383898 M0R2N6 131 aa5.32□□□□□ -1.56
RNU6-1-201ENST00000383898 SPINT1O43278 529 aa5.32□□□□□ -1.56
RNU6-1-201ENST00000383898 SNRPBP14678 240 aaKnown RBP5.32□□□□□ -1.56
RNU6-1-201ENST00000383898 GPC1P35052 558 aa5.32□□□□□ -1.56
RNU6-1-201ENST00000383898 CLN3Q13286 438 aa5.32□□□□□ -1.56
RNU6-1-201ENST00000383898 PTK7Q13308 1070 aa5.32□□□□□ -1.56
RNU6-1-201ENST00000383898 CCDC102BQ68D86 513 aa5.32□□□□□ -1.56
RNU6-1-201ENST00000383898 SIX5Q8N196 739 aa5.32□□□□□ -1.56
RNU6-1-201ENST00000383898 LINC00528Q8N1L1 170 aa5.32□□□□□ -1.56
RNU6-1-201ENST00000383898 XAGE2Q96GT9 111 aa5.32□□□□□ -1.56
RNU6-1-201ENST00000383898 NLRP3Q96P20 1036 aa5.32□□□□□ -1.56
RNU6-1-201ENST00000383898 A0A1W2PRU2 124 aa5.31□□□□□ -1.56
RNU6-1-201ENST00000383898 USP17L15C9J2P7 530 aa5.31□□□□□ -1.56
RNU6-1-201ENST00000383898 USP17L10C9JJH3 530 aa5.31□□□□□ -1.56
RNU6-1-201ENST00000383898 USP17L13C9JLJ4 530 aa5.31□□□□□ -1.56
RNU6-1-201ENST00000383898 USP17L12C9JPN9 530 aa5.31□□□□□ -1.56
RNU6-1-201ENST00000383898 USP17L11C9JVI0 530 aa5.31□□□□□ -1.56
RNU6-1-201ENST00000383898 USP17L21D6R901 530 aa5.31□□□□□ -1.56
RNU6-1-201ENST00000383898 USP17L18D6R9N7 530 aa5.31□□□□□ -1.56
RNU6-1-201ENST00000383898 USP17L22D6RA61 530 aa5.31□□□□□ -1.56
RNU6-1-201ENST00000383898 USP17L17D6RBQ6 530 aa5.31□□□□□ -1.56
RNU6-1-201ENST00000383898 USP17L19D6RCP7 530 aa5.31□□□□□ -1.56
RNU6-1-201ENST00000383898 USP17L20D6RJB6 530 aa5.31□□□□□ -1.56
RNU6-1-201ENST00000383898 INHAP05111 366 aa5.31□□□□□ -1.56
RNU6-1-201ENST00000383898 BMP2P12643 396 aa5.31□□□□□ -1.56
RNU6-1-201ENST00000383898 GMPRP36959 345 aa5.31□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms