RNA–Protein interactions for RNA: ENST00000382045.3

LINC00487-201, long intergenic non-protein coding RNA 487, humanhuman

TSL 2 BASIC

Gene LINC00487, Length 2,131 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00487-201ENST00000382045 USP54Q70EL1 1684 aa20.79■□□□□ 0.92
LINC00487-201ENST00000382045 CEP170BQ9Y4F5 1589 aaPredicted RBP20.77■□□□□ 0.92
LINC00487-201ENST00000382045 ANKRD45Q5TZF3 282 aa20.77■□□□□ 0.92
LINC00487-201ENST00000382045 ANTXR1Q9H6X2 564 aa20.77■□□□□ 0.92
LINC00487-201ENST00000382045 BMP2KLQ5H9B9 411 aa20.77■□□□□ 0.91
LINC00487-201ENST00000382045 INTS3Q68E01 1043 aaKnown RBP20.77■□□□□ 0.91
LINC00487-201ENST00000382045 IGSF1Q8N6C5 1336 aa20.76■□□□□ 0.91
LINC00487-201ENST00000382045 SLKQ9H2G2 1235 aaPredicted RBP20.75■□□□□ 0.91
LINC00487-201ENST00000382045 KCNA6P17658 529 aa20.74■□□□□ 0.91
LINC00487-201ENST00000382045 GSE1Q14687 1217 aa20.74■□□□□ 0.91
LINC00487-201ENST00000382045 MTHFSDQ2M296 383 aaKnown RBP20.74■□□□□ 0.91
LINC00487-201ENST00000382045 LRRC37A3O60309 1634 aa20.74■□□□□ 0.91
LINC00487-201ENST00000382045 FOXO3O43524 673 aa20.73■□□□□ 0.91
LINC00487-201ENST00000382045 AMPHP49418 695 aa20.73■□□□□ 0.91
LINC00487-201ENST00000382045 ATP10DQ9P241 1426 aa20.73■□□□□ 0.91
LINC00487-201ENST00000382045 EYA1Q99502 592 aa20.72■□□□□ 0.91
LINC00487-201ENST00000382045 PTPRCP08575 1304 aa20.72■□□□□ 0.91
LINC00487-201ENST00000382045 RBM25P49756 843 aaKnown RBP20.71■□□□□ 0.91
LINC00487-201ENST00000382045 NLRP6P59044 892 aa20.71■□□□□ 0.91
LINC00487-201ENST00000382045 NWD1Q149M9 1564 aa20.71■□□□□ 0.91
LINC00487-201ENST00000382045 RTF1Q92541 710 aaKnown RBP20.7■□□□□ 0.9
LINC00487-201ENST00000382045 MSH6P52701 1360 aa20.7■□□□□ 0.9
LINC00487-201ENST00000382045 CHD2O14647 1828 aaKnown RBP20.69■□□□□ 0.9
LINC00487-201ENST00000382045 MIS18AQ9NYP9 233 aa20.69■□□□□ 0.9
LINC00487-201ENST00000382045 GAS2L2Q8NHY3 880 aa20.68■□□□□ 0.9
LINC00487-201ENST00000382045 DCTPP1Q9H773 170 aa20.68■□□□□ 0.9
LINC00487-201ENST00000382045 TSPYL4Q9UJ04 414 aa20.68■□□□□ 0.9
LINC00487-201ENST00000382045 HOXC9P31274 260 aa20.67■□□□□ 0.9
LINC00487-201ENST00000382045 ANKRD44Q8N8A2 993 aa20.67■□□□□ 0.9
LINC00487-201ENST00000382045 RTL1A6NKG5 1358 aa20.66■□□□□ 0.9
LINC00487-201ENST00000382045 FAM208AQ9UK61 1670 aaKnown RBP20.66■□□□□ 0.9
LINC00487-201ENST00000382045 LTN1O94822 1766 aa20.66■□□□□ 0.9
LINC00487-201ENST00000382045 SLC4A2P04920 1241 aa20.66■□□□□ 0.9
LINC00487-201ENST00000382045 ZNF142P52746 1687 aaPredicted RBP20.65■□□□□ 0.9
LINC00487-201ENST00000382045 NUTM2GQ5VZR2 741 aa20.65■□□□□ 0.9
LINC00487-201ENST00000382045 CEP85Q6P2H3 762 aa20.65■□□□□ 0.9
LINC00487-201ENST00000382045 RPAP2Q8IXW5 612 aaPredicted RBP20.65■□□□□ 0.9
LINC00487-201ENST00000382045 HTATSF1O43719 755 aaKnown RBP20.64■□□□□ 0.89
LINC00487-201ENST00000382045 TBC1D9Q6ZT07 1266 aa20.64■□□□□ 0.89
LINC00487-201ENST00000382045 ABTB2Q8N961 1025 aa20.63■□□□□ 0.89
LINC00487-201ENST00000382045 PLEKHM2Q8IWE5 1019 aa20.63■□□□□ 0.89
LINC00487-201ENST00000382045 MEIS3Q99687 375 aa20.63■□□□□ 0.89
LINC00487-201ENST00000382045 GSPT1P15170 499 aaKnown RBP20.62■□□□□ 0.89
LINC00487-201ENST00000382045 HSCBQ8IWL3 235 aa20.62■□□□□ 0.89
LINC00487-201ENST00000382045 SPRYD3Q8NCJ5 442 aa20.62■□□□□ 0.89
LINC00487-201ENST00000382045 NCOA3Q9Y6Q9 1424 aa20.61■□□□□ 0.89
LINC00487-201ENST00000382045 G2E3Q7L622 706 aa20.61■□□□□ 0.89
LINC00487-201ENST00000382045 CACNA1FO60840 1977 aa20.61■□□□□ 0.89
LINC00487-201ENST00000382045 GNAT3A8MTJ3 354 aa20.6■□□□□ 0.89
LINC00487-201ENST00000382045 SNX21Q969T3 373 aa20.6■□□□□ 0.89
LINC00487-201ENST00000382045 CDC45O75419 566 aa20.59■□□□□ 0.89
LINC00487-201ENST00000382045 KIF2CQ99661 725 aa20.59■□□□□ 0.89
LINC00487-201ENST00000382045 MAP3K5Q99683 1374 aa20.59■□□□□ 0.89
LINC00487-201ENST00000382045 N4BP2Q86UW6 1770 aaPredicted RBP20.59■□□□□ 0.89
LINC00487-201ENST00000382045 NFAT5O94916 1531 aa20.59■□□□□ 0.89
LINC00487-201ENST00000382045 PHF8Q9UPP1 1060 aa20.59■□□□□ 0.89
LINC00487-201ENST00000382045 CCT4P50991 539 aaKnown RBP20.57■□□□□ 0.88
LINC00487-201ENST00000382045 TTC22Q5TAA0 569 aa20.57■□□□□ 0.88
LINC00487-201ENST00000382045 ANKLE2Q86XL3 938 aa20.57■□□□□ 0.88
LINC00487-201ENST00000382045 CHMP5Q9NZZ3 219 aa20.57■□□□□ 0.88
LINC00487-201ENST00000382045 F6X3S4 739 aa20.57■□□□□ 0.88
LINC00487-201ENST00000382045 C16orf71Q8IYS4 520 aaPredicted RBP20.57■□□□□ 0.88
LINC00487-201ENST00000382045 IL17REQ8NFR9 667 aa20.56■□□□□ 0.88
LINC00487-201ENST00000382045 STK31Q9BXU1 1019 aa20.56■□□□□ 0.88
LINC00487-201ENST00000382045 SLC4A10Q6U841 1118 aa20.56■□□□□ 0.88
LINC00487-201ENST00000382045 LTV1Q96GA3 475 aaPredicted RBP20.56■□□□□ 0.88
LINC00487-201ENST00000382045 ADGRL3Q9HAR2 1447 aa20.55■□□□□ 0.88
LINC00487-201ENST00000382045 TRHP20396 242 aaPredicted RBP20.55■□□□□ 0.88
LINC00487-201ENST00000382045 PHRF1Q9P1Y6 1649 aaKnown RBP20.55■□□□□ 0.88
LINC00487-201ENST00000382045 C14orf37Q86TY3 774 aa20.54■□□□□ 0.88
LINC00487-201ENST00000382045 OTUD7AQ8TE49 926 aaPredicted RBP20.54■□□□□ 0.88
LINC00487-201ENST00000382045 DDIT3P35638 169 aa20.54■□□□□ 0.88
LINC00487-201ENST00000382045 CCDC30Q5VVM6 783 aa20.54■□□□□ 0.88
LINC00487-201ENST00000382045 BABAM1Q9NWV8 329 aa20.54■□□□□ 0.88
LINC00487-201ENST00000382045 SOS1Q07889 1333 aaPredicted RBP20.54■□□□□ 0.88
LINC00487-201ENST00000382045 FLIIQ13045 1269 aa20.53■□□□□ 0.88
LINC00487-201ENST00000382045 RBM33Q96EV2 1170 aaKnown RBP20.53■□□□□ 0.88
LINC00487-201ENST00000382045 SMARCA5O60264 1052 aaPredicted RBP20.52■□□□□ 0.88
LINC00487-201ENST00000382045 HMMRO75330 724 aa20.52■□□□□ 0.88
LINC00487-201ENST00000382045 USHBP1Q8N6Y0 703 aa20.52■□□□□ 0.88
LINC00487-201ENST00000382045 IP6K1Q92551 441 aa20.52■□□□□ 0.88
LINC00487-201ENST00000382045 MED1Q15648 1581 aaPredicted RBP20.52■□□□□ 0.87
LINC00487-201ENST00000382045 RGPD2P0DJD1 1756 aa20.51■□□□□ 0.87
LINC00487-201ENST00000382045 TAF7Q15545 349 aaPredicted RBP20.51■□□□□ 0.87
LINC00487-201ENST00000382045 SETD1BQ9UPS6 1966 aaKnown RBP20.51■□□□□ 0.87
LINC00487-201ENST00000382045 EIF5BO60841 1220 aaKnown RBP20.51■□□□□ 0.87
LINC00487-201ENST00000382045 ADAMTSL3P82987 1691 aa20.51■□□□□ 0.87
LINC00487-201ENST00000382045 APBB1O00213 710 aa20.5■□□□□ 0.87
LINC00487-201ENST00000382045 MCM4P33991 863 aa20.5■□□□□ 0.87
LINC00487-201ENST00000382045 PXDNLA1KZ92 1463 aa20.5■□□□□ 0.87
LINC00487-201ENST00000382045 CEMIPQ8WUJ3 1361 aa20.5■□□□□ 0.87
LINC00487-201ENST00000382045 CD2BP2O95400 341 aaKnown RBP20.5■□□□□ 0.87
LINC00487-201ENST00000382045 GNAI2P04899 355 aa20.5■□□□□ 0.87
LINC00487-201ENST00000382045 FKBP5Q13451 457 aaPredicted RBP20.5■□□□□ 0.87
LINC00487-201ENST00000382045 KDM3BQ7LBC6 1761 aa20.48■□□□□ 0.87
LINC00487-201ENST00000382045 TUBGCP6Q96RT7 1819 aa20.48■□□□□ 0.87
LINC00487-201ENST00000382045 LMO7Q8WWI1 1683 aa20.48■□□□□ 0.87
LINC00487-201ENST00000382045 HSP90AB1P08238 724 aaKnown RBP20.48■□□□□ 0.87
LINC00487-201ENST00000382045 SDSP20132 328 aa20.48■□□□□ 0.87
LINC00487-201ENST00000382045 NECTIN2Q92692 538 aa20.48■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms