RNA–Protein interactions for RNA: ENST00000381196.8

PTPRD-203, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,911 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-203ENST00000381196 API5Q9BZZ5 524 aaKnown RBP5.79□□□□□ -1.48
PTPRD-203ENST00000381196 ZNHIT6Q9NWK9 470 aaKnown RBP5.79□□□□□ -1.48
PTPRD-203ENST00000381196 MINK1Q8N4C8 1332 aaPredicted RBP5.79□□□□□ -1.48
PTPRD-203ENST00000381196 CDC42BPBQ9Y5S2 1711 aa5.79□□□□□ -1.48
PTPRD-203ENST00000381196 RGS3P49796 1198 aa5.79□□□□□ -1.48
PTPRD-203ENST00000381196 DACH1Q9UI36 760 aa5.79□□□□□ -1.48
PTPRD-203ENST00000381196 KIAA0754O94854 1291 aa5.79□□□□□ -1.48
PTPRD-203ENST00000381196 CLUAP1Q96AJ1 413 aa5.79□□□□□ -1.48
PTPRD-203ENST00000381196 SMC4Q9NTJ3 1288 aa5.79□□□□□ -1.48
PTPRD-203ENST00000381196 DMRT2Q9Y5R5 561 aa5.79□□□□□ -1.48
PTPRD-203ENST00000381196 KDM5BQ9UGL1 1544 aa5.79□□□□□ -1.48
PTPRD-203ENST00000381196 KIF1CO43896 1103 aaKnown RBP5.78□□□□□ -1.48
PTPRD-203ENST00000381196 CCDC83Q8IWF9 413 aa5.78□□□□□ -1.48
PTPRD-203ENST00000381196 SOS1Q07889 1333 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-203ENST00000381196 ABCA9Q8IUA7 1624 aa5.78□□□□□ -1.48
PTPRD-203ENST00000381196 KLHL40Q2TBA0 621 aa5.78□□□□□ -1.48
PTPRD-203ENST00000381196 WDR63Q8IWG1 891 aa5.78□□□□□ -1.48
PTPRD-203ENST00000381196 RNF214Q8ND24 703 aa5.78□□□□□ -1.48
PTPRD-203ENST00000381196 OFD1O75665 1012 aa5.78□□□□□ -1.48
PTPRD-203ENST00000381196 KRT222Q8N1A0 295 aa5.78□□□□□ -1.48
PTPRD-203ENST00000381196 IL16Q14005 1332 aa5.78□□□□□ -1.48
PTPRD-203ENST00000381196 IRX3P78415 501 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-203ENST00000381196 APLFQ8IW19 511 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-203ENST00000381196 L3MBTL2Q969R5 705 aa5.78□□□□□ -1.48
PTPRD-203ENST00000381196 MKRN1Q9UHC7 482 aaKnown RBP5.78□□□□□ -1.48
PTPRD-203ENST00000381196 USP32Q8NFA0 1604 aa5.78□□□□□ -1.48
PTPRD-203ENST00000381196 ASXL1Q8IXJ9 1541 aa5.78□□□□□ -1.48
PTPRD-203ENST00000381196 ATP8B1O43520 1251 aa5.78□□□□□ -1.48
PTPRD-203ENST00000381196 MIPOL1Q8TD10 442 aa5.78□□□□□ -1.48
PTPRD-203ENST00000381196 ABCC5O15440 1437 aa5.78□□□□□ -1.48
PTPRD-203ENST00000381196 PDE6BP35913 854 aa5.78□□□□□ -1.48
PTPRD-203ENST00000381196 ARHGAP30Q7Z6I6 1101 aaPredicted RBP5.78□□□□□ -1.48
PTPRD-203ENST00000381196 ITPRIPQ8IWB1 547 aa5.78□□□□□ -1.48
PTPRD-203ENST00000381196 ZNF622Q969S3 477 aaKnown RBP eCLIP5.78□□□□□ -1.48
PTPRD-203ENST00000381196 JMYQ8N9B5 988 aa5.77□□□□□ -1.49
PTPRD-203ENST00000381196 USH1CQ9Y6N9 552 aa5.77□□□□□ -1.49
PTPRD-203ENST00000381196 NUP153P49790 1475 aaKnown RBP5.77□□□□□ -1.49
PTPRD-203ENST00000381196 ZSCAN12O43309 604 aa5.77□□□□□ -1.49
PTPRD-203ENST00000381196 ANKLE2Q86XL3 938 aa5.77□□□□□ -1.49
PTPRD-203ENST00000381196 RASSF4Q9H2L5 321 aa5.77□□□□□ -1.49
PTPRD-203ENST00000381196 TRAK2O60296 914 aa5.77□□□□□ -1.49
PTPRD-203ENST00000381196 PSMA5P28066 241 aa5.77□□□□□ -1.49
PTPRD-203ENST00000381196 SLC4A10Q6U841 1118 aa5.77□□□□□ -1.49
PTPRD-203ENST00000381196 C22orf23Q9BZE7 217 aa5.77□□□□□ -1.49
PTPRD-203ENST00000381196 IQSEC3Q9UPP2 1182 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-203ENST00000381196 RUFY1Q96T51 708 aa5.77□□□□□ -1.49
PTPRD-203ENST00000381196 PYM1Q9BRP8 204 aaKnown RBP5.77□□□□□ -1.49
PTPRD-203ENST00000381196 STRN4Q9NRL3 753 aa5.77□□□□□ -1.49
PTPRD-203ENST00000381196 SLMAPQ14BN4 828 aa5.77□□□□□ -1.49
PTPRD-203ENST00000381196 TXNDC2Q86VQ3 553 aa5.77□□□□□ -1.49
PTPRD-203ENST00000381196 PARD3Q8TEW0 1356 aa5.77□□□□□ -1.49
PTPRD-203ENST00000381196 ZSCAN31Q96LW9 406 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-203ENST00000381196 PUS7Q96PZ0 661 aaKnown RBP5.77□□□□□ -1.49
PTPRD-203ENST00000381196 WDHD1O75717 1129 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-203ENST00000381196 KIF24Q5T7B8 1368 aa5.77□□□□□ -1.49
PTPRD-203ENST00000381196 NBPF7P0C2Y1 421 aaPredicted RBP5.77□□□□□ -1.49
PTPRD-203ENST00000381196 TICAM2Q86XR7 235 aa5.77□□□□□ -1.49
PTPRD-203ENST00000381196 ANKRD36BQ8N2N9 1353 aa5.76□□□□□ -1.49
PTPRD-203ENST00000381196 NF2P35240 595 aa5.76□□□□□ -1.49
PTPRD-203ENST00000381196 DHX16O60231 1041 aaKnown RBP5.76□□□□□ -1.49
PTPRD-203ENST00000381196 ATL3Q6DD88 541 aa5.76□□□□□ -1.49
PTPRD-203ENST00000381196 CTCFLQ8NI51 663 aaPredicted RBP5.76□□□□□ -1.49
PTPRD-203ENST00000381196 IQGAP1P46940 1657 aa5.76□□□□□ -1.49
PTPRD-203ENST00000381196 SSH2Q76I76 1423 aa5.76□□□□□ -1.49
PTPRD-203ENST00000381196 IQCDQ96DY2 449 aa5.76□□□□□ -1.49
PTPRD-203ENST00000381196 OGFRQ9NZT2 677 aa5.76□□□□□ -1.49
PTPRD-203ENST00000381196 PDE4CQ08493 712 aa5.76□□□□□ -1.49
PTPRD-203ENST00000381196 ESCO1Q5FWF5 840 aa5.76□□□□□ -1.49
PTPRD-203ENST00000381196 POTEDQ86YR6 584 aa5.76□□□□□ -1.49
PTPRD-203ENST00000381196 PAIP2Q9BPZ3 127 aaKnown RBP5.76□□□□□ -1.49
PTPRD-203ENST00000381196 ABCC1P33527 1531 aa5.76□□□□□ -1.49
PTPRD-203ENST00000381196 CCDC43Q96MW1 224 aaKnown RBP5.76□□□□□ -1.49
PTPRD-203ENST00000381196 MCM4P33991 863 aa5.76□□□□□ -1.49
PTPRD-203ENST00000381196 AK9Q5TCS8 1911 aa5.76□□□□□ -1.49
PTPRD-203ENST00000381196 SLC26A8Q96RN1 970 aa5.76□□□□□ -1.49
PTPRD-203ENST00000381196 SMARCE1Q969G3 411 aa5.75□□□□□ -1.49
PTPRD-203ENST00000381196 ABCA8O94911 1581 aa5.75□□□□□ -1.49
PTPRD-203ENST00000381196 UQCRHLA0A096LP55 91 aa5.75□□□□□ -1.49
PTPRD-203ENST00000381196 TMCO5BA8MYB1 307 aa5.75□□□□□ -1.49
PTPRD-203ENST00000381196 DDX58O95786 925 aaKnown RBP5.75□□□□□ -1.49
PTPRD-203ENST00000381196 UQCRHP07919 91 aa5.75□□□□□ -1.49
PTPRD-203ENST00000381196 ZKSCAN1P17029 563 aaPredicted RBP5.75□□□□□ -1.49
PTPRD-203ENST00000381196 CCDC150Q8NCX0 1101 aa5.75□□□□□ -1.49
PTPRD-203ENST00000381196 CAMSAP1Q5T5Y3 1602 aa5.75□□□□□ -1.49
PTPRD-203ENST00000381196 EFCC1Q9HA90 598 aa5.75□□□□□ -1.49
PTPRD-203ENST00000381196 CLUL1Q15846 466 aa5.75□□□□□ -1.49
PTPRD-203ENST00000381196 SUDS3Q9H7L9 328 aaPredicted RBP5.75□□□□□ -1.49
PTPRD-203ENST00000381196 ANAPC15P60006 121 aa5.75□□□□□ -1.49
PTPRD-203ENST00000381196 CROCCP2Q86T23 111 aa5.75□□□□□ -1.49
PTPRD-203ENST00000381196 SH2B1Q9NRF2 756 aaPredicted RBP5.75□□□□□ -1.49
PTPRD-203ENST00000381196 SPATA31E1Q6ZUB1 1445 aa5.75□□□□□ -1.49
PTPRD-203ENST00000381196 BRD2P25440 801 aaKnown RBP5.75□□□□□ -1.49
PTPRD-203ENST00000381196 STK11IPQ8N1F8 1099 aa5.75□□□□□ -1.49
PTPRD-203ENST00000381196 PRAG1Q86YV5 1406 aa5.75□□□□□ -1.49
PTPRD-203ENST00000381196 ERCC3P19447 782 aa5.74□□□□□ -1.49
PTPRD-203ENST00000381196 SAMD1Q6SPF0 538 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-203ENST00000381196 ZNF396Q96N95 335 aaPredicted RBP5.74□□□□□ -1.49
PTPRD-203ENST00000381196 PZPP20742 1482 aa5.74□□□□□ -1.49
PTPRD-203ENST00000381196 BECN2A8MW95 431 aa5.74□□□□□ -1.49
PTPRD-203ENST00000381196 SH2D4BQ5SQS7 431 aa5.74□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms