RNA–Protein interactions for RNA: ENST00000380680.4

UBL3-201, Transcript of ubiquitin like 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBL3, Length 4,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBL3-201ENST00000380680 AMOTQ4VCS5 1084 aa21.44■■□□□ 1.02
UBL3-201ENST00000380680 BMP2KLQ5H9B9 411 aa21.44■■□□□ 1.02
UBL3-201ENST00000380680 RSPH6AQ9H0K4 717 aa21.44■■□□□ 1.02
UBL3-201ENST00000380680 CPLX1O14810 134 aa21.44■■□□□ 1.02
UBL3-201ENST00000380680 MRE11P49959 708 aa21.44■■□□□ 1.02
UBL3-201ENST00000380680 MRPL50Q8N5N7 158 aaKnown RBP21.44■■□□□ 1.02
UBL3-201ENST00000380680 BLMP54132 1417 aaPredicted RBP21.44■■□□□ 1.02
UBL3-201ENST00000380680 TTC21AQ8NDW8 1320 aa21.44■■□□□ 1.02
UBL3-201ENST00000380680 TULP1O00294 542 aaPredicted RBP21.43■■□□□ 1.02
UBL3-201ENST00000380680 CDK11BP21127 795 aaKnown RBP21.43■■□□□ 1.02
UBL3-201ENST00000380680 CHMP4CQ96CF2 233 aa21.43■■□□□ 1.02
UBL3-201ENST00000380680 ZMYM4Q5VZL5 1548 aa21.43■■□□□ 1.02
UBL3-201ENST00000380680 MEIS3Q99687 375 aa21.43■■□□□ 1.02
UBL3-201ENST00000380680 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.43■■□□□ 1.02
UBL3-201ENST00000380680 TRDNQ13061 729 aa21.43■■□□□ 1.02
UBL3-201ENST00000380680 CPLX2Q6PUV4 134 aaKnown RBP21.43■■□□□ 1.02
UBL3-201ENST00000380680 CWC27Q6UX04 472 aaKnown RBP21.43■■□□□ 1.02
UBL3-201ENST00000380680 TBC1D32Q96NH3 1257 aa21.43■■□□□ 1.02
UBL3-201ENST00000380680 FAM177BA6PVY3 158 aa21.42■■□□□ 1.02
UBL3-201ENST00000380680 CDC42BPAQ5VT25 1732 aa21.42■■□□□ 1.02
UBL3-201ENST00000380680 PSMA5P28066 241 aa21.42■■□□□ 1.02
UBL3-201ENST00000380680 KIF1BPQ96EK5 621 aa21.42■■□□□ 1.02
UBL3-201ENST00000380680 UGGT1Q9NYU2 1555 aa21.42■■□□□ 1.02
UBL3-201ENST00000380680 CHD1O14646 1710 aa21.42■■□□□ 1.02
UBL3-201ENST00000380680 FOSBP53539 338 aa21.42■■□□□ 1.02
UBL3-201ENST00000380680 ANXA1P04083 346 aa21.41■■□□□ 1.02
UBL3-201ENST00000380680 NUCB1Q02818 461 aa21.41■■□□□ 1.02
UBL3-201ENST00000380680 TBC1D9Q6ZT07 1266 aa21.41■■□□□ 1.02
UBL3-201ENST00000380680 DNAAF4Q8WXU2 420 aa21.41■■□□□ 1.02
UBL3-201ENST00000380680 BICD2Q8TD16 824 aa21.41■■□□□ 1.02
UBL3-201ENST00000380680 KRT28Q7Z3Y7 464 aa21.4■■□□□ 1.02
UBL3-201ENST00000380680 YEATS2Q9ULM3 1422 aa21.4■■□□□ 1.02
UBL3-201ENST00000380680 TRIM35Q9UPQ4 493 aa21.4■■□□□ 1.02
UBL3-201ENST00000380680 HIP1O00291 1037 aa21.4■■□□□ 1.02
UBL3-201ENST00000380680 MTHFSDQ2M296 383 aaKnown RBP21.4■■□□□ 1.02
UBL3-201ENST00000380680 UPF3BQ9BZI7 483 aaKnown RBP21.4■■□□□ 1.02
UBL3-201ENST00000380680 CWC22Q9HCG8 908 aaKnown RBP21.4■■□□□ 1.02
UBL3-201ENST00000380680 CIZ1Q9ULV3 898 aaPredicted RBP21.4■■□□□ 1.02
UBL3-201ENST00000380680 PTCD1O75127 700 aaKnown RBP21.39■■□□□ 1.02
UBL3-201ENST00000380680 INSRP06213 1382 aa21.39■■□□□ 1.02
UBL3-201ENST00000380680 SBNO2Q9Y2G9 1366 aa21.39■■□□□ 1.02
UBL3-201ENST00000380680 RNF214Q8ND24 703 aa21.39■■□□□ 1.01
UBL3-201ENST00000380680 DBF4Q9UBU7 674 aaPredicted RBP21.39■■□□□ 1.01
UBL3-201ENST00000380680 ZBTB40Q9NUA8 1239 aa21.39■■□□□ 1.01
UBL3-201ENST00000380680 KCNA6P17658 529 aa21.38■■□□□ 1.01
UBL3-201ENST00000380680 SYNE3Q6ZMZ3 975 aa21.38■■□□□ 1.01
UBL3-201ENST00000380680 NEO1Q92859 1461 aa21.38■■□□□ 1.01
UBL3-201ENST00000380680 ZFYVE9O95405 1425 aa21.38■■□□□ 1.01
UBL3-201ENST00000380680 PI4KAP2A4QPH2 592 aa21.38■■□□□ 1.01
UBL3-201ENST00000380680 PI4KAP1Q8N8J0 262 aa21.38■■□□□ 1.01
UBL3-201ENST00000380680 RALYLQ86SE5 291 aaKnown RBP21.37■■□□□ 1.01
UBL3-201ENST00000380680 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP21.37■■□□□ 1.01
UBL3-201ENST00000380680 MAP3K19Q56UN5 1328 aa21.37■■□□□ 1.01
UBL3-201ENST00000380680 NASPP49321 788 aaPredicted RBP21.37■■□□□ 1.01
UBL3-201ENST00000380680 TSHZ3Q63HK5 1081 aa21.36■■□□□ 1.01
UBL3-201ENST00000380680 CYP46A1Q9Y6A2 500 aa21.36■■□□□ 1.01
UBL3-201ENST00000380680 VPS37DQ86XT2 251 aa21.36■■□□□ 1.01
UBL3-201ENST00000380680 EYA1Q99502 592 aa21.36■■□□□ 1.01
UBL3-201ENST00000380680 KIF6Q6ZMV9 814 aa21.36■■□□□ 1.01
UBL3-201ENST00000380680 BECN2A8MW95 431 aa21.36■■□□□ 1.01
UBL3-201ENST00000380680 TPM4P67936 248 aa21.36■■□□□ 1.01
UBL3-201ENST00000380680 IL27Q8NEV9 243 aa21.36■■□□□ 1.01
UBL3-201ENST00000380680 IL13P35225 146 aa21.35■■□□□ 1.01
UBL3-201ENST00000380680 CCDC34Q96HJ3 373 aa21.35■■□□□ 1.01
UBL3-201ENST00000380680 LARP1Q6PKG0 1096 aaKnown RBP21.35■■□□□ 1.01
UBL3-201ENST00000380680 GOLGA6L19H0YKK7 550 aa21.34■■□□□ 1.01
UBL3-201ENST00000380680 FIBPO43427 364 aa21.34■■□□□ 1.01
UBL3-201ENST00000380680 SEC24BO95487 1268 aa21.34■■□□□ 1.01
UBL3-201ENST00000380680 ZCCHC11Q5TAX3 1644 aaKnown RBP21.34■■□□□ 1.01
UBL3-201ENST00000380680 ERVK-7P63135 1459 aa21.34■■□□□ 1.01
UBL3-201ENST00000380680 RAB11FIP3O75154 756 aa21.34■■□□□ 1.01
UBL3-201ENST00000380680 MBD3O95983 291 aa21.34■■□□□ 1.01
UBL3-201ENST00000380680 ANKRD24Q8TF21 1146 aa21.34■■□□□ 1.01
UBL3-201ENST00000380680 TBX22Q9Y458 520 aa21.34■■□□□ 1.01
UBL3-201ENST00000380680 TRPM2O94759 1503 aa21.34■■□□□ 1.01
UBL3-201ENST00000380680 KDM5DQ9BY66 1539 aa21.34■■□□□ 1.01
UBL3-201ENST00000380680 GLRX3O76003 335 aaKnown RBP21.34■■□□□ 1.01
UBL3-201ENST00000380680 SMC5Q8IY18 1101 aa21.34■■□□□ 1.01
UBL3-201ENST00000380680 ANKRD44Q8N8A2 993 aa21.34■■□□□ 1.01
UBL3-201ENST00000380680 FLT4P35916 1363 aa21.34■■□□□ 1.01
UBL3-201ENST00000380680 AKAP17AQ02040 695 aaKnown RBP21.33■■□□□ 1.01
UBL3-201ENST00000380680 ARID3AQ99856 593 aa21.33■■□□□ 1
UBL3-201ENST00000380680 KDM2BQ8NHM5 1336 aa21.32■■□□□ 1
UBL3-201ENST00000380680 TMX4Q9H1E5 349 aaPredicted RBP21.32■■□□□ 1
UBL3-201ENST00000380680 NFXL1Q6ZNB6 911 aa21.32■■□□□ 1
UBL3-201ENST00000380680 PPP1R42Q7Z4L9 355 aa21.32■■□□□ 1
UBL3-201ENST00000380680 CCDC85AQ96PX6 553 aaPredicted RBP21.32■■□□□ 1
UBL3-201ENST00000380680 MYD88Q99836 296 aa21.32■■□□□ 1
UBL3-201ENST00000380680 JAKMIP1Q96N16 626 aaKnown RBP21.32■■□□□ 1
UBL3-201ENST00000380680 CHRNA2Q15822 529 aa21.31■■□□□ 1
UBL3-201ENST00000380680 TTC22Q5TAA0 569 aa21.31■■□□□ 1
UBL3-201ENST00000380680 C16orf71Q8IYS4 520 aaPredicted RBP21.31■■□□□ 1
UBL3-201ENST00000380680 RASSF8Q8NHQ8 419 aa21.31■■□□□ 1
UBL3-201ENST00000380680 PDCP20941 246 aa21.31■■□□□ 1
UBL3-201ENST00000380680 TRIM29Q14134 588 aa21.3■■□□□ 1
UBL3-201ENST00000380680 CCDC57Q2TAC2 916 aa21.3■■□□□ 1
UBL3-201ENST00000380680 STK3Q13188 491 aa21.3■■□□□ 1
UBL3-201ENST00000380680 CNNM1Q9NRU3 951 aa21.3■■□□□ 1
UBL3-201ENST00000380680 ADCY10Q96PN6 1610 aa21.3■■□□□ 1
UBL3-201ENST00000380680 EDC4Q6P2E9 1401 aaKnown RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms