RNA–Protein interactions for RNA: ENST00000380654.8

EBF1-202, Transcript of early B cell factor 1, humanhuman

TSL 1 (best) BASIC

Gene EBF1, Length 2,345 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF1-202ENST00000380654 TBC1D9Q6ZT07 1266 aa25.06■■□□□ 1.6
EBF1-202ENST00000380654 BRPF3Q9ULD4 1205 aa25.06■■□□□ 1.6
EBF1-202ENST00000380654 PIK3C2AO00443 1686 aa25.05■■□□□ 1.6
EBF1-202ENST00000380654 FLT4P35916 1363 aa25.05■■□□□ 1.6
EBF1-202ENST00000380654 KIF24Q5T7B8 1368 aa25.05■■□□□ 1.6
EBF1-202ENST00000380654 SBNO1A3KN83 1393 aa25.05■■□□□ 1.6
EBF1-202ENST00000380654 MSH6P52701 1360 aa25.05■■□□□ 1.6
EBF1-202ENST00000380654 CEP170BQ9Y4F5 1589 aaPredicted RBP25.05■■□□□ 1.6
EBF1-202ENST00000380654 AMPHP49418 695 aa25.04■■□□□ 1.6
EBF1-202ENST00000380654 NUTM2GQ5VZR2 741 aa25.04■■□□□ 1.6
EBF1-202ENST00000380654 EYA1Q99502 592 aa25.04■■□□□ 1.6
EBF1-202ENST00000380654 ATP10DQ9P241 1426 aa25.04■■□□□ 1.6
EBF1-202ENST00000380654 HSCBQ8IWL3 235 aa25.03■■□□□ 1.6
EBF1-202ENST00000380654 FER1L4A9Z1Z3 1794 aa25.03■■□□□ 1.6
EBF1-202ENST00000380654 SLC4A2P04920 1241 aa25.03■■□□□ 1.6
EBF1-202ENST00000380654 DCTPP1Q9H773 170 aa25.03■■□□□ 1.6
EBF1-202ENST00000380654 GSPT1P15170 499 aaKnown RBP25.02■■□□□ 1.6
EBF1-202ENST00000380654 HAP1P54257 671 aaPredicted RBP25.02■■□□□ 1.6
EBF1-202ENST00000380654 C16orf71Q8IYS4 520 aaPredicted RBP25.02■■□□□ 1.6
EBF1-202ENST00000380654 THEMISQ8N1K5 641 aaPredicted RBP25.01■■□□□ 1.59
EBF1-202ENST00000380654 RTF1Q92541 710 aaKnown RBP25.01■■□□□ 1.59
EBF1-202ENST00000380654 MEIS3Q99687 375 aa25.01■■□□□ 1.59
EBF1-202ENST00000380654 TSPYL4Q9UJ04 414 aa25.01■■□□□ 1.59
EBF1-202ENST00000380654 KDRP35968 1356 aa25.01■■□□□ 1.59
EBF1-202ENST00000380654 NLRP6P59044 892 aa25.01■■□□□ 1.59
EBF1-202ENST00000380654 PLEKHM2Q8IWE5 1019 aa25.01■■□□□ 1.59
EBF1-202ENST00000380654 ANKRD44Q8N8A2 993 aa25.01■■□□□ 1.59
EBF1-202ENST00000380654 KIF2CQ99661 725 aa25.01■■□□□ 1.59
EBF1-202ENST00000380654 G2E3Q7L622 706 aa25■■□□□ 1.59
EBF1-202ENST00000380654 KCNA6P17658 529 aa25■■□□□ 1.59
EBF1-202ENST00000380654 CEP85Q6P2H3 762 aa25■■□□□ 1.59
EBF1-202ENST00000380654 RTN4Q9NQC3 1192 aaKnown RBP25■■□□□ 1.59
EBF1-202ENST00000380654 PTPRCP08575 1304 aa24.99■■□□□ 1.59
EBF1-202ENST00000380654 IGSF1Q8N6C5 1336 aa24.99■■□□□ 1.59
EBF1-202ENST00000380654 RTL1A6NKG5 1358 aa24.99■■□□□ 1.59
EBF1-202ENST00000380654 XRN1Q8IZH2 1706 aaKnown RBP24.98■■□□□ 1.59
EBF1-202ENST00000380654 OTUD7AQ8TE49 926 aaPredicted RBP24.98■■□□□ 1.59
EBF1-202ENST00000380654 CHMP5Q9NZZ3 219 aa24.98■■□□□ 1.59
EBF1-202ENST00000380654 F6X3S4 739 aa24.97■■□□□ 1.59
EBF1-202ENST00000380654 APBB1O00213 710 aa24.97■■□□□ 1.59
EBF1-202ENST00000380654 SMARCA5O60264 1052 aaPredicted RBP24.95■■□□□ 1.58
EBF1-202ENST00000380654 CD2BP2O95400 341 aaKnown RBP24.95■■□□□ 1.58
EBF1-202ENST00000380654 SLC4A10Q6U841 1118 aa24.95■■□□□ 1.58
EBF1-202ENST00000380654 RPAP2Q8IXW5 612 aaPredicted RBP24.95■■□□□ 1.58
EBF1-202ENST00000380654 SNX21Q969T3 373 aa24.95■■□□□ 1.58
EBF1-202ENST00000380654 MARF1Q9Y4F3 1742 aaKnown RBP24.95■■□□□ 1.58
EBF1-202ENST00000380654 CDC45O75419 566 aa24.95■■□□□ 1.58
EBF1-202ENST00000380654 RBM42Q9BTD8 480 aaKnown RBP24.95■■□□□ 1.58
EBF1-202ENST00000380654 MCM4P33991 863 aa24.94■■□□□ 1.58
EBF1-202ENST00000380654 NCOA3Q9Y6Q9 1424 aa24.94■■□□□ 1.58
EBF1-202ENST00000380654 HOXC9P31274 260 aa24.93■■□□□ 1.58
EBF1-202ENST00000380654 GAS2L2Q8NHY3 880 aa24.93■■□□□ 1.58
EBF1-202ENST00000380654 TTC22Q5TAA0 569 aa24.92■■□□□ 1.58
EBF1-202ENST00000380654 LTV1Q96GA3 475 aaPredicted RBP24.92■■□□□ 1.58
EBF1-202ENST00000380654 ABTB2Q8N961 1025 aa24.91■■□□□ 1.58
EBF1-202ENST00000380654 DDIT3P35638 169 aa24.91■■□□□ 1.58
EBF1-202ENST00000380654 NECTIN2Q92692 538 aa24.9■■□□□ 1.58
EBF1-202ENST00000380654 HSP90AB1P08238 724 aaKnown RBP24.9■■□□□ 1.58
EBF1-202ENST00000380654 RBM33Q96EV2 1170 aaKnown RBP24.9■■□□□ 1.58
EBF1-202ENST00000380654 NWD1Q149M9 1564 aa24.89■■□□□ 1.58
EBF1-202ENST00000380654 ANKARQ7Z5J8 1434 aa24.89■■□□□ 1.58
EBF1-202ENST00000380654 C14orf37Q86TY3 774 aa24.88■■□□□ 1.57
EBF1-202ENST00000380654 GNAT3A8MTJ3 354 aa24.87■■□□□ 1.57
EBF1-202ENST00000380654 FOXD4L1Q9NU39 408 aa24.87■■□□□ 1.57
EBF1-202ENST00000380654 LRRC37A3O60309 1634 aa24.87■■□□□ 1.57
EBF1-202ENST00000380654 USHBP1Q8N6Y0 703 aa24.87■■□□□ 1.57
EBF1-202ENST00000380654 IL17REQ8NFR9 667 aa24.86■■□□□ 1.57
EBF1-202ENST00000380654 SDSP20132 328 aa24.85■■□□□ 1.57
EBF1-202ENST00000380654 STK31Q9BXU1 1019 aa24.85■■□□□ 1.57
EBF1-202ENST00000380654 GZF1Q9H116 711 aaPredicted RBP24.85■■□□□ 1.57
EBF1-202ENST00000380654 CCT4P50991 539 aaKnown RBP24.84■■□□□ 1.57
EBF1-202ENST00000380654 SETD1BQ9UPS6 1966 aaKnown RBP24.83■■□□□ 1.57
EBF1-202ENST00000380654 HTATSF1O43719 755 aaKnown RBP24.83■■□□□ 1.57
EBF1-202ENST00000380654 FLIIQ13045 1269 aa24.83■■□□□ 1.57
EBF1-202ENST00000380654 FAM208AQ9UK61 1670 aaKnown RBP24.83■■□□□ 1.57
EBF1-202ENST00000380654 K7ELQ4 463 aaPredicted RBP24.82■■□□□ 1.56
EBF1-202ENST00000380654 FKBP5Q13451 457 aaPredicted RBP24.82■■□□□ 1.56
EBF1-202ENST00000380654 MAP3K5Q99683 1374 aa24.82■■□□□ 1.56
EBF1-202ENST00000380654 ARXQ96QS3 562 aa24.81■■□□□ 1.56
EBF1-202ENST00000380654 TRAK2O60296 914 aa24.8■■□□□ 1.56
EBF1-202ENST00000380654 HMMRO75330 724 aa24.8■■□□□ 1.56
EBF1-202ENST00000380654 HSP90AA1P07900 732 aaKnown RBP24.8■■□□□ 1.56
EBF1-202ENST00000380654 TNPO1Q92973 898 aaKnown RBP24.8■■□□□ 1.56
EBF1-202ENST00000380654 LTN1O94822 1766 aa24.8■■□□□ 1.56
EBF1-202ENST00000380654 USP54Q70EL1 1684 aa24.8■■□□□ 1.56
EBF1-202ENST00000380654 CCDC30Q5VVM6 783 aa24.8■■□□□ 1.56
EBF1-202ENST00000380654 PHF8Q9UPP1 1060 aa24.8■■□□□ 1.56
EBF1-202ENST00000380654 EXOC6BQ9Y2D4 811 aa24.8■■□□□ 1.56
EBF1-202ENST00000380654 USP26Q9BXU7 913 aa24.79■■□□□ 1.56
EBF1-202ENST00000380654 GNAI2P04899 355 aa24.79■■□□□ 1.56
EBF1-202ENST00000380654 TAF7Q15545 349 aaPredicted RBP24.78■■□□□ 1.56
EBF1-202ENST00000380654 TSHZ3Q63HK5 1081 aa24.77■■□□□ 1.56
EBF1-202ENST00000380654 PNMA6EA0A0J9YXQ4 647 aa24.76■■□□□ 1.55
EBF1-202ENST00000380654 CHD2O14647 1828 aaKnown RBP24.76■■□□□ 1.55
EBF1-202ENST00000380654 RAB3GAP1Q15042 981 aa24.75■■□□□ 1.55
EBF1-202ENST00000380654 CIZ1Q9ULV3 898 aaPredicted RBP24.75■■□□□ 1.55
EBF1-202ENST00000380654 ZBTB7CA1YPR0 619 aa24.75■■□□□ 1.55
EBF1-202ENST00000380654 PDE1AP54750 535 aa24.74■■□□□ 1.55
EBF1-202ENST00000380654 DDX11L8A8MPP1 907 aa24.73■■□□□ 1.55
EBF1-202ENST00000380654 NBPF6Q5VWK0 638 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 52.7 ms