RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 DDRGK1Q96HY6 314 aa10.12□□□□□ -0.79
PDLIM5-204ENST00000380176 PIK3C2AO00443 1686 aa10.12□□□□□ -0.79
PDLIM5-204ENST00000380176 TWISTNBQ3B726 338 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-204ENST00000380176 CEP170BQ9Y4F5 1589 aaPredicted RBP10.12□□□□□ -0.79
PDLIM5-204ENST00000380176 HDAC1Q13547 482 aaPredicted RBP10.11□□□□□ -0.79
PDLIM5-204ENST00000380176 LMOD3Q0VAK6 560 aa10.11□□□□□ -0.79
PDLIM5-204ENST00000380176 KRT24Q2M2I5 525 aa10.11□□□□□ -0.79
PDLIM5-204ENST00000380176 MCM10Q7L590 875 aa10.11□□□□□ -0.79
PDLIM5-204ENST00000380176 ZNF428Q96B54 188 aa10.11□□□□□ -0.79
PDLIM5-204ENST00000380176 DNAJC5Q9H3Z4 198 aa10.11□□□□□ -0.79
PDLIM5-204ENST00000380176 TTC21AQ8NDW8 1320 aa10.11□□□□□ -0.79
PDLIM5-204ENST00000380176 NUTM2GQ5VZR2 741 aa10.1□□□□□ -0.79
PDLIM5-204ENST00000380176 RBM33Q96EV2 1170 aaKnown RBP10.1□□□□□ -0.79
PDLIM5-204ENST00000380176 FOXO3O43524 673 aa10.1□□□□□ -0.79
PDLIM5-204ENST00000380176 MARF1Q9Y4F3 1742 aaKnown RBP10.1□□□□□ -0.79
PDLIM5-204ENST00000380176 ZBTB7BO15156 539 aaPredicted RBP10.09□□□□□ -0.79
PDLIM5-204ENST00000380176 SMC5Q8IY18 1101 aa10.09□□□□□ -0.79
PDLIM5-204ENST00000380176 C1orf115Q9H7X2 142 aa10.09□□□□□ -0.79
PDLIM5-204ENST00000380176 NLRP6P59044 892 aa10.08□□□□□ -0.8
PDLIM5-204ENST00000380176 ARHGAP45Q92619 1136 aa10.08□□□□□ -0.8
PDLIM5-204ENST00000380176 CHD2O14647 1828 aaKnown RBP10.08□□□□□ -0.8
PDLIM5-204ENST00000380176 PIK3R4Q99570 1358 aa10.08□□□□□ -0.8
PDLIM5-204ENST00000380176 SBNO1A3KN83 1393 aa10.07□□□□□ -0.8
PDLIM5-204ENST00000380176 FLT4P35916 1363 aa10.07□□□□□ -0.8
PDLIM5-204ENST00000380176 CHL1O00533 1208 aa10.07□□□□□ -0.8
PDLIM5-204ENST00000380176 MTHFSDQ2M296 383 aaKnown RBP10.07□□□□□ -0.8
PDLIM5-204ENST00000380176 EYA1Q99502 592 aa10.07□□□□□ -0.8
PDLIM5-204ENST00000380176 ARID3AQ99856 593 aa10.07□□□□□ -0.8
PDLIM5-204ENST00000380176 MIS18AQ9NYP9 233 aa10.07□□□□□ -0.8
PDLIM5-204ENST00000380176 ABCC4O15439 1325 aa10.07□□□□□ -0.8
PDLIM5-204ENST00000380176 AMPHP49418 695 aa10.07□□□□□ -0.8
PDLIM5-204ENST00000380176 MKRN4PQ13434 485 aaPredicted RBP10.07□□□□□ -0.8
PDLIM5-204ENST00000380176 SPDYE4A6NLX3 237 aa10.06□□□□□ -0.8
PDLIM5-204ENST00000380176 ARHGEF10O15013 1369 aa10.06□□□□□ -0.8
PDLIM5-204ENST00000380176 ANKARQ7Z5J8 1434 aa10.06□□□□□ -0.8
PDLIM5-204ENST00000380176 CRB1P82279 1406 aa10.06□□□□□ -0.8
PDLIM5-204ENST00000380176 SIRT2Q8IXJ6 389 aa10.05□□□□□ -0.8
PDLIM5-204ENST00000380176 SETD1BQ9UPS6 1966 aaKnown RBP10.05□□□□□ -0.8
PDLIM5-204ENST00000380176 NUCB1Q02818 461 aa10.05□□□□□ -0.8
PDLIM5-204ENST00000380176 ABTB2Q8N961 1025 aa10.05□□□□□ -0.8
PDLIM5-204ENST00000380176 LNPKQ9C0E8 428 aa10.05□□□□□ -0.8
PDLIM5-204ENST00000380176 KDRP35968 1356 aa10.05□□□□□ -0.8
PDLIM5-204ENST00000380176 ANKLE2Q86XL3 938 aa10.05□□□□□ -0.8
PDLIM5-204ENST00000380176 IGSF1Q8N6C5 1336 aa10.05□□□□□ -0.8
PDLIM5-204ENST00000380176 DEKP35659 375 aaKnown RBP10.04□□□□□ -0.8
PDLIM5-204ENST00000380176 HOXC9P31274 260 aa10.04□□□□□ -0.8
PDLIM5-204ENST00000380176 RTL5Q5HYW3 569 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-204ENST00000380176 ZNF142P52746 1687 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-204ENST00000380176 RGS12O14924 1447 aa10.03□□□□□ -0.8
PDLIM5-204ENST00000380176 CHD1LQ86WJ1 897 aa10.03□□□□□ -0.8
PDLIM5-204ENST00000380176 LTV1Q96GA3 475 aaPredicted RBP10.03□□□□□ -0.8
PDLIM5-204ENST00000380176 API5Q9BZZ5 524 aaKnown RBP10.03□□□□□ -0.8
PDLIM5-204ENST00000380176 NWD1Q149M9 1564 aa10.03□□□□□ -0.8
PDLIM5-204ENST00000380176 TBC1D32Q96NH3 1257 aa10.03□□□□□ -0.8
PDLIM5-204ENST00000380176 PHF8Q9UPP1 1060 aa10.03□□□□□ -0.8
PDLIM5-204ENST00000380176 LTN1O94822 1766 aa10.03□□□□□ -0.8
PDLIM5-204ENST00000380176 USP54Q70EL1 1684 aa10.02□□□□□ -0.8
PDLIM5-204ENST00000380176 KIAA0232Q92628 1395 aa10.02□□□□□ -0.8
PDLIM5-204ENST00000380176 ADAMTSL3P82987 1691 aa10.02□□□□□ -0.81
PDLIM5-204ENST00000380176 ANKRD45Q5TZF3 282 aa10.02□□□□□ -0.81
PDLIM5-204ENST00000380176 RTF1Q92541 710 aaKnown RBP10.02□□□□□ -0.81
PDLIM5-204ENST00000380176 USHBP1Q8N6Y0 703 aa10.01□□□□□ -0.81
PDLIM5-204ENST00000380176 TSPYL4Q9UJ04 414 aa10.01□□□□□ -0.81
PDLIM5-204ENST00000380176 MFAP1P55081 439 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-204ENST00000380176 INTS3Q68E01 1043 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-204ENST00000380176 UPF2Q9HAU5 1272 aaKnown RBP10.01□□□□□ -0.81
PDLIM5-204ENST00000380176 NFKBIBQ15653 356 aa10□□□□□ -0.81
PDLIM5-204ENST00000380176 ESCO1Q5FWF5 840 aa10□□□□□ -0.81
PDLIM5-204ENST00000380176 G2E3Q7L622 706 aa10□□□□□ -0.81
PDLIM5-204ENST00000380176 PKNOX2Q96KN3 472 aa10□□□□□ -0.81
PDLIM5-204ENST00000380176 CHMP4BQ9H444 224 aaKnown RBP10□□□□□ -0.81
PDLIM5-204ENST00000380176 ZNF219Q9P2Y4 722 aaPredicted RBP10□□□□□ -0.81
PDLIM5-204ENST00000380176 GAS2L2Q8NHY3 880 aa10□□□□□ -0.81
PDLIM5-204ENST00000380176 GCC1Q96CN9 775 aa10□□□□□ -0.81
PDLIM5-204ENST00000380176 RGPD2P0DJD1 1756 aa9.99□□□□□ -0.81
PDLIM5-204ENST00000380176 LRRC37A3O60309 1634 aa9.99□□□□□ -0.81
PDLIM5-204ENST00000380176 MSH6P52701 1360 aa9.99□□□□□ -0.81
PDLIM5-204ENST00000380176 IL17REQ8NFR9 667 aa9.99□□□□□ -0.81
PDLIM5-204ENST00000380176 KIF24Q5T7B8 1368 aa9.98□□□□□ -0.81
PDLIM5-204ENST00000380176 GNAT3A8MTJ3 354 aa9.98□□□□□ -0.81
PDLIM5-204ENST00000380176 ADGRL3Q9HAR2 1447 aa9.98□□□□□ -0.81
PDLIM5-204ENST00000380176 F6X3S4 739 aa9.98□□□□□ -0.81
PDLIM5-204ENST00000380176 XPCQ01831 940 aaPredicted RBP9.98□□□□□ -0.81
PDLIM5-204ENST00000380176 PSME1Q06323 249 aa9.98□□□□□ -0.81
PDLIM5-204ENST00000380176 ORAI2Q96SN7 254 aa9.98□□□□□ -0.81
PDLIM5-204ENST00000380176 MEIS3Q99687 375 aa9.98□□□□□ -0.81
PDLIM5-204ENST00000380176 USP35Q9P2H5 1018 aa9.98□□□□□ -0.81
PDLIM5-204ENST00000380176 ATP10DQ9P241 1426 aa9.98□□□□□ -0.81
PDLIM5-204ENST00000380176 NFAT5O94916 1531 aa9.98□□□□□ -0.81
PDLIM5-204ENST00000380176 TBC1D2Q9BYX2 928 aa9.98□□□□□ -0.81
PDLIM5-204ENST00000380176 C22orf23Q9BZE7 217 aa9.98□□□□□ -0.81
PDLIM5-204ENST00000380176 PTPRCP08575 1304 aa9.97□□□□□ -0.81
PDLIM5-204ENST00000380176 ZBTB7CA1YPR0 619 aa9.97□□□□□ -0.81
PDLIM5-204ENST00000380176 NECTIN2Q92692 538 aa9.97□□□□□ -0.81
PDLIM5-204ENST00000380176 NPHP4O75161 1426 aaPredicted RBP9.97□□□□□ -0.81
PDLIM5-204ENST00000380176 HTATSF1O43719 755 aaKnown RBP9.96□□□□□ -0.81
PDLIM5-204ENST00000380176 NBPF6Q5VWK0 638 aa9.96□□□□□ -0.81
PDLIM5-204ENST00000380176 IP6K1Q92551 441 aa9.96□□□□□ -0.81
PDLIM5-204ENST00000380176 NBPF4Q96M43 638 aa9.96□□□□□ -0.81
PDLIM5-204ENST00000380176 SLKQ9H2G2 1235 aaPredicted RBP9.96□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms