RNA–Protein interactions for RNA: ENST00000377973.4

CIR1-202, Transcript of corepressor interacting with RBPJ, 1, humanhuman

TSL 3

Gene CIR1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIR1-202ENST00000377973 USP35Q9P2H5 1018 aa11.33□□□□□ -0.6
CIR1-202ENST00000377973 AKAP12Q02952 1782 aa11.33□□□□□ -0.6
CIR1-202ENST00000377973 BRPF1P55201 1214 aaPredicted RBP11.32□□□□□ -0.6
CIR1-202ENST00000377973 MVPQ14764 893 aaKnown RBP11.32□□□□□ -0.6
CIR1-202ENST00000377973 NFE2L2Q16236 605 aa11.32□□□□□ -0.6
CIR1-202ENST00000377973 DEFB132Q7Z7B7 95 aa11.32□□□□□ -0.6
CIR1-202ENST00000377973 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.32□□□□□ -0.67e-8■□□□□ 8.7
CIR1-202ENST00000377973 RRP7AQ9Y3A4 280 aaKnown RBP11.32□□□□□ -0.6
CIR1-202ENST00000377973 MAP2P11137 1827 aaKnown RBP11.32□□□□□ -0.6
CIR1-202ENST00000377973 TTC21BQ7Z4L5 1316 aa11.32□□□□□ -0.6
CIR1-202ENST00000377973 RGPD8O14715 1765 aaPredicted RBP11.31□□□□□ -0.6
CIR1-202ENST00000377973 SLIT2O94813 1529 aa11.31□□□□□ -0.6
CIR1-202ENST00000377973 PLEKHG3A1L390 1219 aa11.31□□□□□ -0.6
CIR1-202ENST00000377973 C20orf194Q5TEA3 1177 aa11.31□□□□□ -0.6
CIR1-202ENST00000377973 WAPLQ7Z5K2 1190 aa11.31□□□□□ -0.6
CIR1-202ENST00000377973 ARHGAP45Q92619 1136 aa11.31□□□□□ -0.6
CIR1-202ENST00000377973 CHMP4AQ9BY43 222 aa11.31□□□□□ -0.6
CIR1-202ENST00000377973 IFT57Q9NWB7 429 aa11.31□□□□□ -0.6
CIR1-202ENST00000377973 POLKQ9UBT6 870 aa11.31□□□□□ -0.6
CIR1-202ENST00000377973 NPHP3Q7Z494 1330 aa11.31□□□□□ -0.6
CIR1-202ENST00000377973 NUTM2FA1L443 756 aa11.3□□□□□ -0.6
CIR1-202ENST00000377973 MKRN4PQ13434 485 aaPredicted RBP11.3□□□□□ -0.6
CIR1-202ENST00000377973 BECN1Q14457 450 aa11.3□□□□□ -0.6
CIR1-202ENST00000377973 COG6Q9Y2V7 657 aa11.3□□□□□ -0.6
CIR1-202ENST00000377973 PRKAR2BP31323 418 aa11.29□□□□□ -0.6
CIR1-202ENST00000377973 ATF7IPQ6VMQ6 1270 aa11.29□□□□□ -0.6
CIR1-202ENST00000377973 NPM2Q86SE8 214 aaKnown RBP11.29□□□□□ -0.6
CIR1-202ENST00000377973 UNC5CLQ8IV45 518 aa11.29□□□□□ -0.6
CIR1-202ENST00000377973 KIF24Q5T7B8 1368 aa11.28□□□□□ -0.6
CIR1-202ENST00000377973 ANKARQ7Z5J8 1434 aa11.28□□□□□ -0.6
CIR1-202ENST00000377973 POLA2Q14181 598 aa11.28□□□□□ -0.6
CIR1-202ENST00000377973 RSPH6AQ9H0K4 717 aa11.28□□□□□ -0.6
CIR1-202ENST00000377973 FMN2Q9NZ56 1722 aa11.28□□□□□ -0.6
CIR1-202ENST00000377973 EXOSC9Q06265 439 aaKnown RBP11.27□□□□□ -0.61
CIR1-202ENST00000377973 API5Q9BZZ5 524 aaKnown RBP11.27□□□□□ -0.61
CIR1-202ENST00000377973 FBXO3Q9UK99 471 aa11.27□□□□□ -0.61
CIR1-202ENST00000377973 TRIM35Q9UPQ4 493 aa11.27□□□□□ -0.61
CIR1-202ENST00000377973 SPATA31A3Q5VYP0 1347 aa11.27□□□□□ -0.61
CIR1-202ENST00000377973 LRP5O75197 1615 aa11.27□□□□□ -0.61
CIR1-202ENST00000377973 PLCH1Q4KWH8 1693 aa11.27□□□□□ -0.61
CIR1-202ENST00000377973 VIRMAQ69YN4 1812 aaKnown RBP11.26□□□□□ -0.61
CIR1-202ENST00000377973 ONECUT3O60422 494 aaPredicted RBP11.26□□□□□ -0.61
CIR1-202ENST00000377973 IL13P35225 146 aa11.26□□□□□ -0.61
CIR1-202ENST00000377973 RGS3P49796 1198 aa11.26□□□□□ -0.61
CIR1-202ENST00000377973 HDAC1Q13547 482 aaPredicted RBP11.26□□□□□ -0.61
CIR1-202ENST00000377973 PANK1Q8TE04 598 aa11.26□□□□□ -0.61
CIR1-202ENST00000377973 TOPAZ1Q8N9V7 1692 aa11.26□□□□□ -0.61
CIR1-202ENST00000377973 ITPRIPQ8IWB1 547 aa11.25□□□□□ -0.61
CIR1-202ENST00000377973 SEPT12Q8IYM1 358 aa11.25□□□□□ -0.61
CIR1-202ENST00000377973 CABLES1Q8TDN4 633 aa11.25□□□□□ -0.61
CIR1-202ENST00000377973 ABCA3Q99758 1704 aa11.25□□□□□ -0.61
CIR1-202ENST00000377973 NWD2Q9ULI1 1742 aa11.24□□□□□ -0.61
CIR1-202ENST00000377973 KRT28Q7Z3Y7 464 aa11.24□□□□□ -0.61
CIR1-202ENST00000377973 NGDNQ8NEJ9 315 aaKnown RBP11.24□□□□□ -0.61
CIR1-202ENST00000377973 SOS1Q07889 1333 aaPredicted RBP11.24□□□□□ -0.61
CIR1-202ENST00000377973 USP6P35125 1406 aa11.24□□□□□ -0.61
CIR1-202ENST00000377973 NRKQ7Z2Y5 1582 aa11.24□□□□□ -0.61
CIR1-202ENST00000377973 KIF1AQ12756 1690 aa11.24□□□□□ -0.61
CIR1-202ENST00000377973 VPS72Q15906 364 aa11.23□□□□□ -0.61
CIR1-202ENST00000377973 NME9Q86XW9 330 aa11.23□□□□□ -0.61
CIR1-202ENST00000377973 RTF1Q92541 710 aaKnown RBP11.23□□□□□ -0.61
CIR1-202ENST00000377973 GCC1Q96CN9 775 aa11.23□□□□□ -0.61
CIR1-202ENST00000377973 ACEP12821 1306 aa11.23□□□□□ -0.61
CIR1-202ENST00000377973 PSDA5PKW4 1024 aaPredicted RBP11.22□□□□□ -0.61
CIR1-202ENST00000377973 ARHGEF10O15013 1369 aa11.22□□□□□ -0.61
CIR1-202ENST00000377973 HTATSF1O43719 755 aaKnown RBP11.22□□□□□ -0.61
CIR1-202ENST00000377973 USP31Q70CQ4 1352 aa11.22□□□□□ -0.61
CIR1-202ENST00000377973 GAS2L2Q8NHY3 880 aa11.22□□□□□ -0.61
CIR1-202ENST00000377973 SSH1Q8WYL5 1049 aa11.22□□□□□ -0.61
CIR1-202ENST00000377973 LAS1LQ9Y4W2 734 aaKnown RBP11.22□□□□□ -0.61
CIR1-202ENST00000377973 NRAPQ86VF7 1730 aa11.21□□□□□ -0.61
CIR1-202ENST00000377973 FLT4P35916 1363 aa11.21□□□□□ -0.61
CIR1-202ENST00000377973 FAM83GA6ND36 823 aa11.21□□□□□ -0.61
CIR1-202ENST00000377973 PLEKHG5O94827 1062 aa11.21□□□□□ -0.61
CIR1-202ENST00000377973 KRT27Q7Z3Y8 459 aa11.21□□□□□ -0.61
CIR1-202ENST00000377973 TSR2Q969E8 191 aaKnown RBP11.21□□□□□ -0.61
CIR1-202ENST00000377973 RBM42Q9BTD8 480 aaKnown RBP11.21□□□□□ -0.61
CIR1-202ENST00000377973 NOB1Q9ULX3 412 aaKnown RBP11.21□□□□□ -0.61
CIR1-202ENST00000377973 OVOS2A0A0J9YW53 1432 aa11.2□□□□□ -0.62
CIR1-202ENST00000377973 OVOS2Q6IE36 1432 aa11.2□□□□□ -0.62
CIR1-202ENST00000377973 SBNO1A3KN83 1393 aa11.2□□□□□ -0.62
CIR1-202ENST00000377973 TRIM27P14373 513 aa11.2□□□□□ -0.62
CIR1-202ENST00000377973 TWISTNBQ3B726 338 aaPredicted RBP11.2□□□□□ -0.62
CIR1-202ENST00000377973 C8orf34Q49A92 452 aa11.2□□□□□ -0.62
CIR1-202ENST00000377973 BCL2L13Q9BXK5 485 aa11.2□□□□□ -0.62
CIR1-202ENST00000377973 BABAM1Q9NWV8 329 aa11.2□□□□□ -0.62
CIR1-202ENST00000377973 EMILIN1Q9Y6C2 1016 aa11.2□□□□□ -0.62
CIR1-202ENST00000377973 TNS3Q68CZ2 1445 aa11.19□□□□□ -0.62
CIR1-202ENST00000377973 KIAA0232Q92628 1395 aa11.19□□□□□ -0.62
CIR1-202ENST00000377973 IGHDP01880 384 aa11.19□□□□□ -0.62
CIR1-202ENST00000377973 HMOX1P09601 288 aa11.19□□□□□ -0.62
CIR1-202ENST00000377973 ZNF853P0CG23 659 aa11.19□□□□□ -0.62
CIR1-202ENST00000377973 AMPHP49418 695 aa11.19□□□□□ -0.62
CIR1-202ENST00000377973 PHF8Q9UPP1 1060 aa11.19□□□□□ -0.62
CIR1-202ENST00000377973 PTPRCP08575 1304 aa11.18□□□□□ -0.62
CIR1-202ENST00000377973 SF3B2Q13435 895 aaKnown RBP11.18□□□□□ -0.62
CIR1-202ENST00000377973 FAM182BQ5T319 152 aa11.18□□□□□ -0.62
CIR1-202ENST00000377973 PDZRN3Q9UPQ7 1066 aa11.18□□□□□ -0.62
CIR1-202ENST00000377973 TRPM3Q9HCF6 1732 aaPredicted RBP11.18□□□□□ -0.62
CIR1-202ENST00000377973 RTL1A6NKG5 1358 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 103.8 ms