RNA–Protein interactions for RNA: ENST00000377142.4

NKX2-2-201, Transcript of NK2 homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NKX2-2, Length 2,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2-201ENST00000377142 ALS2Q96Q42 1657 aa22.29■■□□□ 1.16
NKX2-2-201ENST00000377142 USP19O94966 1318 aa22.28■■□□□ 1.16
NKX2-2-201ENST00000377142 ANP32AP39687 249 aaKnown RBP22.27■■□□□ 1.16
NKX2-2-201ENST00000377142 ELL2O00472 640 aaPredicted RBP22.27■■□□□ 1.16
NKX2-2-201ENST00000377142 ATF3P18847 181 aa22.27■■□□□ 1.16
NKX2-2-201ENST00000377142 LTV1Q96GA3 475 aaPredicted RBP22.27■■□□□ 1.16
NKX2-2-201ENST00000377142 KRT28Q7Z3Y7 464 aa22.26■■□□□ 1.15
NKX2-2-201ENST00000377142 CHMP4BQ9H444 224 aaKnown RBP22.26■■□□□ 1.15
NKX2-2-201ENST00000377142 RGS3P49796 1198 aa22.25■■□□□ 1.15
NKX2-2-201ENST00000377142 XPCQ01831 940 aaPredicted RBP22.25■■□□□ 1.15
NKX2-2-201ENST00000377142 VIRMAQ69YN4 1812 aaKnown RBP22.25■■□□□ 1.15
NKX2-2-201ENST00000377142 MAP3K5Q99683 1374 aa22.24■■□□□ 1.15
NKX2-2-201ENST00000377142 ABCC4O15439 1325 aa22.24■■□□□ 1.15
NKX2-2-201ENST00000377142 GNAT3A8MTJ3 354 aa22.24■■□□□ 1.15
NKX2-2-201ENST00000377142 GCP02774 474 aa22.24■■□□□ 1.15
NKX2-2-201ENST00000377142 ZBTB40Q9NUA8 1239 aa22.24■■□□□ 1.15
NKX2-2-201ENST00000377142 RGPD2P0DJD1 1756 aa22.23■■□□□ 1.15
NKX2-2-201ENST00000377142 API5Q9BZZ5 524 aaKnown RBP22.23■■□□□ 1.15
NKX2-2-201ENST00000377142 MSH6P52701 1360 aa22.23■■□□□ 1.15
NKX2-2-201ENST00000377142 CAMTA1Q9Y6Y1 1673 aa22.23■■□□□ 1.15
NKX2-2-201ENST00000377142 HDAC1Q13547 482 aaPredicted RBP22.22■■□□□ 1.15
NKX2-2-201ENST00000377142 FAM161AQ3B820 660 aa22.22■■□□□ 1.15
NKX2-2-201ENST00000377142 ARHGEF25Q86VW2 580 aa22.22■■□□□ 1.15
NKX2-2-201ENST00000377142 LMTK3Q96Q04 1460 aa22.22■■□□□ 1.15
NKX2-2-201ENST00000377142 MSH5O43196 834 aa22.21■■□□□ 1.15
NKX2-2-201ENST00000377142 HSPA2P54652 639 aa22.21■■□□□ 1.15
NKX2-2-201ENST00000377142 CADPS2Q86UW7 1296 aa22.21■■□□□ 1.15
NKX2-2-201ENST00000377142 TSPYL4Q9UJ04 414 aa22.21■■□□□ 1.15
NKX2-2-201ENST00000377142 NCAPD2Q15021 1401 aa22.21■■□□□ 1.15
NKX2-2-201ENST00000377142 XIRP1Q702N8 1843 aaKnown RBP22.2■■□□□ 1.14
NKX2-2-201ENST00000377142 LMOD2Q6P5Q4 547 aa22.2■■□□□ 1.14
NKX2-2-201ENST00000377142 STRCQ7RTU9 1775 aa22.2■■□□□ 1.14
NKX2-2-201ENST00000377142 ZBTB7CA1YPR0 619 aa22.19■■□□□ 1.14
NKX2-2-201ENST00000377142 LMO7Q8WWI1 1683 aa22.18■■□□□ 1.14
NKX2-2-201ENST00000377142 NBPF6Q5VWK0 638 aa22.18■■□□□ 1.14
NKX2-2-201ENST00000377142 USHBP1Q8N6Y0 703 aa22.18■■□□□ 1.14
NKX2-2-201ENST00000377142 NBPF4Q96M43 638 aa22.18■■□□□ 1.14
NKX2-2-201ENST00000377142 MED1Q15648 1581 aaPredicted RBP22.18■■□□□ 1.14
NKX2-2-201ENST00000377142 KRT24Q2M2I5 525 aa22.18■■□□□ 1.14
NKX2-2-201ENST00000377142 C8orf34Q49A92 452 aa22.18■■□□□ 1.14
NKX2-2-201ENST00000377142 BABAM1Q9NWV8 329 aa22.18■■□□□ 1.14
NKX2-2-201ENST00000377142 PDZRN3Q9UPQ7 1066 aa22.16■■□□□ 1.14
NKX2-2-201ENST00000377142 NPHP3Q7Z494 1330 aa22.16■■□□□ 1.14
NKX2-2-201ENST00000377142 PTPRCP08575 1304 aa22.15■■□□□ 1.14
NKX2-2-201ENST00000377142 FAM208AQ9UK61 1670 aaKnown RBP22.15■■□□□ 1.14
NKX2-2-201ENST00000377142 ZBTB7BO15156 539 aaPredicted RBP22.15■■□□□ 1.14
NKX2-2-201ENST00000377142 IPO9Q96P70 1041 aaKnown RBP22.15■■□□□ 1.14
NKX2-2-201ENST00000377142 SOS1Q07889 1333 aaPredicted RBP22.14■■□□□ 1.14
NKX2-2-201ENST00000377142 MIS18AQ9NYP9 233 aa22.14■■□□□ 1.13
NKX2-2-201ENST00000377142 RGPD5Q99666 1765 aa22.13■■□□□ 1.13
NKX2-2-201ENST00000377142 RGS12O14924 1447 aa22.13■■□□□ 1.13
NKX2-2-201ENST00000377142 TNS3Q68CZ2 1445 aa22.13■■□□□ 1.13
NKX2-2-201ENST00000377142 KDM4FA0A1W2PPD8 638 aa22.13■■□□□ 1.13
NKX2-2-201ENST00000377142 SMC5Q8IY18 1101 aa22.13■■□□□ 1.13
NKX2-2-201ENST00000377142 IL17REQ8NFR9 667 aa22.13■■□□□ 1.13
NKX2-2-201ENST00000377142 ANKRD24Q8TF21 1146 aa22.13■■□□□ 1.13
NKX2-2-201ENST00000377142 CEMIPQ8WUJ3 1361 aa22.12■■□□□ 1.13
NKX2-2-201ENST00000377142 PXDNQ92626 1479 aa22.12■■□□□ 1.13
NKX2-2-201ENST00000377142 ABCC6O95255 1503 aa22.12■■□□□ 1.13
NKX2-2-201ENST00000377142 CRYBG1Q9Y4K1 1723 aa22.12■■□□□ 1.13
NKX2-2-201ENST00000377142 LRRC59Q96AG4 307 aaKnown RBP22.11■■□□□ 1.13
NKX2-2-201ENST00000377142 CACNA1FO60840 1977 aa22.11■■□□□ 1.13
NKX2-2-201ENST00000377142 TAF7Q15545 349 aaPredicted RBP22.11■■□□□ 1.13
NKX2-2-201ENST00000377142 NPM2Q86SE8 214 aaKnown RBP22.11■■□□□ 1.13
NKX2-2-201ENST00000377142 INTS3Q68E01 1043 aaKnown RBP22.1■■□□□ 1.13
NKX2-2-201ENST00000377142 ERICH6Q7L0X2 663 aa22.1■■□□□ 1.13
NKX2-2-201ENST00000377142 KDM3BQ7LBC6 1761 aa22.1■■□□□ 1.13
NKX2-2-201ENST00000377142 AMOTQ4VCS5 1084 aa22.1■■□□□ 1.13
NKX2-2-201ENST00000377142 PLEKHO1Q53GL0 409 aaPredicted RBP22.1■■□□□ 1.13
NKX2-2-201ENST00000377142 OVOS2A0A0G2JMS6 1433 aa22.08■■□□□ 1.13
NKX2-2-201ENST00000377142 PLEKHG5O94827 1062 aa22.08■■□□□ 1.13
NKX2-2-201ENST00000377142 AKAP4Q5JQC9 854 aa22.08■■□□□ 1.12
NKX2-2-201ENST00000377142 COL18A1P39060 1754 aa22.07■■□□□ 1.12
NKX2-2-201ENST00000377142 ERBB3P21860 1342 aa22.07■■□□□ 1.12
NKX2-2-201ENST00000377142 NOP58Q9Y2X3 529 aaKnown RBP22.07■■□□□ 1.12
NKX2-2-201ENST00000377142 SLC4A2P04920 1241 aa22.07■■□□□ 1.12
NKX2-2-201ENST00000377142 ZNF530Q6P9A1 599 aaPredicted RBP22.06■■□□□ 1.12
NKX2-2-201ENST00000377142 DDX17Q92841 729 aaKnown RBP22.06■■□□□ 1.12
NKX2-2-201ENST00000377142 STK31Q9BXU1 1019 aa22.06■■□□□ 1.12
NKX2-2-201ENST00000377142 AXIN2Q9Y2T1 843 aa22.06■■□□□ 1.12
NKX2-2-201ENST00000377142 CCDC30Q5VVM6 783 aa22.05■■□□□ 1.12
NKX2-2-201ENST00000377142 ANP32EQ9BTT0 268 aa22.05■■□□□ 1.12
NKX2-2-201ENST00000377142 SPATA31A3Q5VYP0 1347 aa22.04■■□□□ 1.12
NKX2-2-201ENST00000377142 ZC3H6P61129 1189 aaKnown RBP22.04■■□□□ 1.12
NKX2-2-201ENST00000377142 GCC1Q96CN9 775 aa22.04■■□□□ 1.12
NKX2-2-201ENST00000377142 N4BP2Q86UW6 1770 aaPredicted RBP22.04■■□□□ 1.12
NKX2-2-201ENST00000377142 C1orf115Q9H7X2 142 aa22.03■■□□□ 1.12
NKX2-2-201ENST00000377142 ADAMTS7Q9UKP4 1686 aa22.03■■□□□ 1.12
NKX2-2-201ENST00000377142 NUCB1Q02818 461 aa22.02■■□□□ 1.12
NKX2-2-201ENST00000377142 C1orf141Q5JVX7 400 aa22.02■■□□□ 1.12
NKX2-2-201ENST00000377142 DDRGK1Q96HY6 314 aa22.02■■□□□ 1.11
NKX2-2-201ENST00000377142 ZBTB47Q9UFB7 747 aaPredicted RBP22.02■■□□□ 1.11
NKX2-2-201ENST00000377142 PLEKHG2Q9H7P9 1386 aa22.02■■□□□ 1.11
NKX2-2-201ENST00000377142 BRINP3Q76B58 766 aa22■■□□□ 1.11
NKX2-2-201ENST00000377142 SIPA1L3O60292 1781 aaPredicted RBP22■■□□□ 1.11
NKX2-2-201ENST00000377142 CPDO75976 1380 aa22■■□□□ 1.11
NKX2-2-201ENST00000377142 TEFQ10587 303 aa22■■□□□ 1.11
NKX2-2-201ENST00000377142 LGR6Q9HBX8 967 aa22■■□□□ 1.11
NKX2-2-201ENST00000377142 HOXB7P09629 217 aa21.99■■□□□ 1.11
NKX2-2-201ENST00000377142 ZNF335Q9H4Z2 1342 aaPredicted RBP21.99■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms