RNA–Protein interactions for RNA: ENST00000372736.3

COL9A2-201, Transcript of collagen type IX alpha 2 chain, humanhuman

TSL 3

Gene COL9A2, Length 319 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A2-201ENST00000372736 KCNQ2O43526 872 aa31.07■■■□□ 2.56
COL9A2-201ENST00000372736 AMER1Q5JTC6 1135 aaPredicted RBP31.07■■■□□ 2.56
COL9A2-201ENST00000372736 BTAF1O14981 1849 aa31.07■■■□□ 2.56
COL9A2-201ENST00000372736 DOT1LQ8TEK3 1739 aa31.07■■■□□ 2.56
COL9A2-201ENST00000372736 ZCRB1Q8TBF4 217 aaKnown RBP31.06■■■□□ 2.56
COL9A2-201ENST00000372736 DDX54Q8TDD1 881 aaKnown RBP31.06■■■□□ 2.56
COL9A2-201ENST00000372736 ACSBG1Q96GR2 724 aa31.06■■■□□ 2.56
COL9A2-201ENST00000372736 PKD1L3Q7Z443 1732 aa31.05■■■□□ 2.56
COL9A2-201ENST00000372736 RAPGEF4Q8WZA2 1011 aa31.05■■■□□ 2.56
COL9A2-201ENST00000372736 MORC1Q86VD1 984 aa31.04■■■□□ 2.56
COL9A2-201ENST00000372736 KAT6BQ8WYB5 2073 aa31.02■■■□□ 2.56
COL9A2-201ENST00000372736 PER1O15534 1290 aaPredicted RBP31.02■■■□□ 2.56
COL9A2-201ENST00000372736 R3HDM1Q15032 1099 aaKnown RBP31.02■■■□□ 2.56
COL9A2-201ENST00000372736 TATP17735 454 aaPredicted RBP31.01■■■□□ 2.55
COL9A2-201ENST00000372736 LRP5O75197 1615 aa31■■■□□ 2.55
COL9A2-201ENST00000372736 EIF4A2Q14240 407 aaKnown RBP31■■■□□ 2.55
COL9A2-201ENST00000372736 EYA1Q99502 592 aa31■■■□□ 2.55
COL9A2-201ENST00000372736 PROM2Q8N271 834 aa30.98■■■□□ 2.55
COL9A2-201ENST00000372736 PCDH11XQ9BZA7 1347 aa30.95■■■□□ 2.54
COL9A2-201ENST00000372736 PCDH11YQ9BZA8 1340 aa30.95■■■□□ 2.54
COL9A2-201ENST00000372736 TXNRD1Q16881 649 aa30.94■■■□□ 2.54
COL9A2-201ENST00000372736 NBPF14Q5TI25 921 aa30.94■■■□□ 2.54
COL9A2-201ENST00000372736 IGSF1Q8N6C5 1336 aa30.93■■■□□ 2.54
COL9A2-201ENST00000372736 NPC1L1Q9UHC9 1359 aa30.92■■■□□ 2.54
COL9A2-201ENST00000372736 ANO8Q9HCE9 1232 aaPredicted RBP30.92■■■□□ 2.54
COL9A2-201ENST00000372736 TOGARAM1Q9Y4F4 1720 aa30.92■■■□□ 2.54
COL9A2-201ENST00000372736 PAPPAQ13219 1627 aa30.91■■■□□ 2.54
COL9A2-201ENST00000372736 CYP27B1O15528 508 aa30.9■■■□□ 2.54
COL9A2-201ENST00000372736 PRIM1P49642 420 aaKnown RBP30.89■■■□□ 2.54
COL9A2-201ENST00000372736 CC2D1BQ5T0F9 858 aaKnown RBP30.89■■■□□ 2.54
COL9A2-201ENST00000372736 PLEKHG2Q9H7P9 1386 aa30.88■■■□□ 2.53
COL9A2-201ENST00000372736 SYTL4Q96C24 671 aaPredicted RBP30.87■■■□□ 2.53
COL9A2-201ENST00000372736 LY75O60449 1722 aa30.87■■■□□ 2.53
COL9A2-201ENST00000372736 CASZ1Q86V15 1759 aa30.85■■■□□ 2.53
COL9A2-201ENST00000372736 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP30.84■■■□□ 2.53
COL9A2-201ENST00000372736 SPG7Q9UQ90 795 aa30.84■■■□□ 2.53
COL9A2-201ENST00000372736 ITGB4P16144 1822 aa30.83■■■□□ 2.53
COL9A2-201ENST00000372736 MTHFSP49914 203 aa30.81■■■□□ 2.52
COL9A2-201ENST00000372736 IL13P35225 146 aa30.8■■■□□ 2.52
COL9A2-201ENST00000372736 NKX1-1Q15270 411 aaPredicted RBP30.79■■■□□ 2.52
COL9A2-201ENST00000372736 LRRC4BQ9NT99 713 aa30.79■■■□□ 2.52
COL9A2-201ENST00000372736 KDRP35968 1356 aa30.79■■■□□ 2.52
COL9A2-201ENST00000372736 AEBP1Q8IUX7 1158 aa30.78■■■□□ 2.52
COL9A2-201ENST00000372736 STK32BQ9NY57 414 aa30.77■■■□□ 2.52
COL9A2-201ENST00000372736 COL3A1P02461 1466 aaPredicted RBP30.76■■■□□ 2.51
COL9A2-201ENST00000372736 PHKG2P15735 406 aa30.75■■■□□ 2.51
COL9A2-201ENST00000372736 CNGB1Q14028 1251 aaPredicted RBP30.75■■■□□ 2.51
COL9A2-201ENST00000372736 SLC15A2Q16348 729 aa30.75■■■□□ 2.51
COL9A2-201ENST00000372736 SLC27A3Q5K4L6 730 aa30.75■■■□□ 2.51
COL9A2-201ENST00000372736 IFNL2Q8IZJ0 200 aa30.73■■■□□ 2.51
COL9A2-201ENST00000372736 SULT6B1Q6IMI4 303 aa30.72■■■□□ 2.51
COL9A2-201ENST00000372736 PDGFDQ9GZP0 370 aaPredicted RBP30.72■■■□□ 2.51
COL9A2-201ENST00000372736 QSER1Q2KHR3 1735 aa30.71■■■□□ 2.51
COL9A2-201ENST00000372736 ZNF827Q17R98 1081 aa30.71■■■□□ 2.51
COL9A2-201ENST00000372736 MPRIPQ6WCQ1 1025 aa30.71■■■□□ 2.51
COL9A2-201ENST00000372736 TUBGCP6Q96RT7 1819 aa30.7■■■□□ 2.5
COL9A2-201ENST00000372736 KCNQ4P56696 695 aa30.69■■■□□ 2.5
COL9A2-201ENST00000372736 PLEKHO1Q53GL0 409 aaPredicted RBP30.69■■■□□ 2.5
COL9A2-201ENST00000372736 PALLDQ8WX93 1383 aa30.68■■■□□ 2.5
COL9A2-201ENST00000372736 C5P01031 1676 aa30.68■■■□□ 2.5
COL9A2-201ENST00000372736 AMOTQ4VCS5 1084 aa30.67■■■□□ 2.5
COL9A2-201ENST00000372736 AKT1S1Q96B36 256 aa30.67■■■□□ 2.5
COL9A2-201ENST00000372736 CCNL1Q9UK58 526 aaPredicted RBP30.67■■■□□ 2.5
COL9A2-201ENST00000372736 DIAPH1O60610 1272 aaKnown RBP30.66■■■□□ 2.5
COL9A2-201ENST00000372736 ZNF530Q6P9A1 599 aaPredicted RBP30.66■■■□□ 2.5
COL9A2-201ENST00000372736 PIGBQ92521 554 aa30.66■■■□□ 2.5
COL9A2-201ENST00000372736 TAF1LQ8IZX4 1826 aa30.66■■■□□ 2.5
COL9A2-201ENST00000372736 KDM6AO15550 1401 aaPredicted RBP30.65■■■□□ 2.5
COL9A2-201ENST00000372736 SPON1Q9HCB6 807 aa30.64■■■□□ 2.5
COL9A2-201ENST00000372736 TMOD3Q9NYL9 352 aa30.63■■■□□ 2.49
COL9A2-201ENST00000372736 HSP90AB1P08238 724 aaKnown RBP30.61■■■□□ 2.49
COL9A2-201ENST00000372736 HMOX1P09601 288 aa30.61■■■□□ 2.49
COL9A2-201ENST00000372736 SMARCC1Q92922 1105 aaPredicted RBP30.61■■■□□ 2.49
COL9A2-201ENST00000372736 DCAF5Q96JK2 942 aa30.61■■■□□ 2.49
COL9A2-201ENST00000372736 ZBTB7AO95365 584 aa30.6■■■□□ 2.49
COL9A2-201ENST00000372736 SCN11AQ9UI33 1791 aa30.59■■■□□ 2.49
COL9A2-201ENST00000372736 ERVV-2B6SEH9 535 aa30.57■■■□□ 2.48
COL9A2-201ENST00000372736 PPP2R1AP30153 589 aa30.57■■■□□ 2.48
COL9A2-201ENST00000372736 C1orf141Q5JVX7 400 aa30.57■■■□□ 2.48
COL9A2-201ENST00000372736 PNPLA7Q6ZV29 1317 aa30.56■■■□□ 2.48
COL9A2-201ENST00000372736 C4BP0C0L5 1744 aa30.56■■■□□ 2.48
COL9A2-201ENST00000372736 ASAP1Q9ULH1 1129 aa30.55■■■□□ 2.48
COL9A2-201ENST00000372736 VIRMAQ69YN4 1812 aaKnown RBP30.54■■■□□ 2.48
COL9A2-201ENST00000372736 MTFR1LQ9H019 292 aa30.54■■■□□ 2.48
COL9A2-201ENST00000372736 TFCP2L1Q9NZI6 479 aa30.54■■■□□ 2.48
COL9A2-201ENST00000372736 PTGER2P43116 358 aa30.53■■■□□ 2.48
COL9A2-201ENST00000372736 U2SURPO15042 1029 aaKnown RBP30.52■■■□□ 2.48
COL9A2-201ENST00000372736 CFAP53Q96M91 514 aa30.52■■■□□ 2.48
COL9A2-201ENST00000372736 ATG3Q9NT62 314 aa30.52■■■□□ 2.48
COL9A2-201ENST00000372736 ATF5Q9Y2D1 282 aaPredicted RBP30.52■■■□□ 2.48
COL9A2-201ENST00000372736 COL24A1Q17RW2 1714 aa30.52■■■□□ 2.48
COL9A2-201ENST00000372736 ADAMTS7Q9UKP4 1686 aa30.52■■■□□ 2.48
COL9A2-201ENST00000372736 LOC102724428A0A0B4J2F2 783 aa30.51■■■□□ 2.47
COL9A2-201ENST00000372736 SIK1P57059 783 aa30.51■■■□□ 2.47
COL9A2-201ENST00000372736 ZNF831Q5JPB2 1677 aa30.5■■■□□ 2.47
COL9A2-201ENST00000372736 AKAP4Q5JQC9 854 aa30.5■■■□□ 2.47
COL9A2-201ENST00000372736 SGIP1Q9BQI5 828 aa30.49■■■□□ 2.47
COL9A2-201ENST00000372736 PPP1R1BQ9UD71 204 aaPredicted RBP30.49■■■□□ 2.47
COL9A2-201ENST00000372736 MRC1P22897 1456 aa30.49■■■□□ 2.47
COL9A2-201ENST00000372736 UBR3Q6ZT12 1888 aa30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms