RNA–Protein interactions for RNA: ENST00000371834.6

BRD3-202, Transcript of bromodomain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD3, Length 2,529 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-202ENST00000371834 USP31Q70CQ4 1352 aa28.44■■■□□ 2.14
BRD3-202ENST00000371834 MAP3K19Q56UN5 1328 aa28.43■■■□□ 2.14
BRD3-202ENST00000371834 CDC45O75419 566 aa28.43■■■□□ 2.14
BRD3-202ENST00000371834 ANKRD44Q8N8A2 993 aa28.43■■■□□ 2.14
BRD3-202ENST00000371834 MSH6P52701 1360 aa28.43■■■□□ 2.14
BRD3-202ENST00000371834 RGPD1P0DJD0 1748 aa28.43■■■□□ 2.14
BRD3-202ENST00000371834 NALCNQ8IZF0 1738 aa28.43■■■□□ 2.14
BRD3-202ENST00000371834 KIAA0232Q92628 1395 aa28.43■■■□□ 2.14
BRD3-202ENST00000371834 CRB1P82279 1406 aa28.42■■■□□ 2.14
BRD3-202ENST00000371834 CEP85Q6P2H3 762 aa28.41■■■□□ 2.14
BRD3-202ENST00000371834 OTUD7AQ8TE49 926 aaPredicted RBP28.41■■■□□ 2.14
BRD3-202ENST00000371834 SSH2Q76I76 1423 aa28.41■■■□□ 2.14
BRD3-202ENST00000371834 TRAK2O60296 914 aa28.41■■■□□ 2.14
BRD3-202ENST00000371834 HAP1P54257 671 aaPredicted RBP28.41■■■□□ 2.14
BRD3-202ENST00000371834 PLPPR3Q6T4P5 718 aa28.41■■■□□ 2.14
BRD3-202ENST00000371834 MEIS3Q99687 375 aa28.41■■■□□ 2.14
BRD3-202ENST00000371834 FOXD4L1Q9NU39 408 aa28.41■■■□□ 2.14
BRD3-202ENST00000371834 MTHFSDQ2M296 383 aaKnown RBP28.4■■■□□ 2.14
BRD3-202ENST00000371834 AMOTL2Q9Y2J4 779 aa28.4■■■□□ 2.14
BRD3-202ENST00000371834 SLC4A2P04920 1241 aa28.4■■■□□ 2.14
BRD3-202ENST00000371834 APBB1O00213 710 aa28.39■■■□□ 2.14
BRD3-202ENST00000371834 RIMS1Q86UR5 1692 aaKnown RBP28.39■■■□□ 2.14
BRD3-202ENST00000371834 RTL1A6NKG5 1358 aa28.38■■■□□ 2.13
BRD3-202ENST00000371834 TTC22Q5TAA0 569 aa28.38■■■□□ 2.13
BRD3-202ENST00000371834 SMARCA5O60264 1052 aaPredicted RBP28.38■■■□□ 2.13
BRD3-202ENST00000371834 PTPRCP08575 1304 aa28.38■■■□□ 2.13
BRD3-202ENST00000371834 L1TD1Q5T7N2 865 aaKnown RBP28.37■■■□□ 2.13
BRD3-202ENST00000371834 RPAP2Q8IXW5 612 aaPredicted RBP28.37■■■□□ 2.13
BRD3-202ENST00000371834 G2E3Q7L622 706 aa28.36■■■□□ 2.13
BRD3-202ENST00000371834 ARHGEF10O15013 1369 aa28.36■■■□□ 2.13
BRD3-202ENST00000371834 TNPO1Q92973 898 aaKnown RBP28.36■■■□□ 2.13
BRD3-202ENST00000371834 TSPYL4Q9UJ04 414 aa28.35■■■□□ 2.13
BRD3-202ENST00000371834 EID1Q9Y6B2 187 aa28.35■■■□□ 2.13
BRD3-202ENST00000371834 NGDNQ8NEJ9 315 aaKnown RBP28.35■■■□□ 2.13
BRD3-202ENST00000371834 RTF1Q92541 710 aaKnown RBP28.34■■■□□ 2.13
BRD3-202ENST00000371834 K7ELQ4 463 aaPredicted RBP28.34■■■□□ 2.13
BRD3-202ENST00000371834 HSP90AA1P07900 732 aaKnown RBP28.34■■■□□ 2.13
BRD3-202ENST00000371834 F6X3S4 739 aa28.33■■■□□ 2.13
BRD3-202ENST00000371834 TTC21AQ8NDW8 1320 aa28.33■■■□□ 2.13
BRD3-202ENST00000371834 SLC4A10Q6U841 1118 aa28.33■■■□□ 2.13
BRD3-202ENST00000371834 EYA1Q99502 592 aa28.33■■■□□ 2.13
BRD3-202ENST00000371834 FLT4P35916 1363 aa28.32■■■□□ 2.12
BRD3-202ENST00000371834 GOLGA6L3A6NEY3 463 aa28.32■■■□□ 2.12
BRD3-202ENST00000371834 AMPHP49418 695 aa28.32■■■□□ 2.12
BRD3-202ENST00000371834 SBNO1A3KN83 1393 aa28.32■■■□□ 2.12
BRD3-202ENST00000371834 DDX11L8A8MPP1 907 aa28.32■■■□□ 2.12
BRD3-202ENST00000371834 FSD2A1L4K1 749 aa28.31■■■□□ 2.12
BRD3-202ENST00000371834 XRCC6P12956 609 aaKnown RBP eCLIP28.31■■■□□ 2.12
BRD3-202ENST00000371834 CIZ1Q9ULV3 898 aaPredicted RBP28.31■■■□□ 2.12
BRD3-202ENST00000371834 FMN2Q9NZ56 1722 aa28.31■■■□□ 2.12
BRD3-202ENST00000371834 CEP170BQ9Y4F5 1589 aaPredicted RBP28.3■■■□□ 2.12
BRD3-202ENST00000371834 RGPD8O14715 1765 aaPredicted RBP28.3■■■□□ 2.12
BRD3-202ENST00000371834 RAB3GAP1Q15042 981 aa28.3■■■□□ 2.12
BRD3-202ENST00000371834 GAS2L2Q8NHY3 880 aa28.3■■■□□ 2.12
BRD3-202ENST00000371834 SDSP20132 328 aa28.29■■■□□ 2.12
BRD3-202ENST00000371834 KDRP35968 1356 aa28.28■■■□□ 2.12
BRD3-202ENST00000371834 NUTM2GQ5VZR2 741 aa28.27■■■□□ 2.12
BRD3-202ENST00000371834 IGSF1Q8N6C5 1336 aa28.27■■■□□ 2.12
BRD3-202ENST00000371834 TBX22Q9Y458 520 aa28.26■■■□□ 2.11
BRD3-202ENST00000371834 DIP2AQ14689 1571 aa28.26■■■□□ 2.11
BRD3-202ENST00000371834 USP26Q9BXU7 913 aa28.26■■■□□ 2.11
BRD3-202ENST00000371834 PANK2Q9BZ23 570 aa28.25■■■□□ 2.11
BRD3-202ENST00000371834 NLRP6P59044 892 aa28.24■■■□□ 2.11
BRD3-202ENST00000371834 FAM43AQ8N2R8 423 aa28.24■■■□□ 2.11
BRD3-202ENST00000371834 ANO8Q9HCE9 1232 aaPredicted RBP28.24■■■□□ 2.11
BRD3-202ENST00000371834 PIK3C2AO00443 1686 aa28.24■■■□□ 2.11
BRD3-202ENST00000371834 NECTIN2Q92692 538 aa28.23■■■□□ 2.11
BRD3-202ENST00000371834 GBP4Q96PP9 640 aa28.23■■■□□ 2.11
BRD3-202ENST00000371834 CCT4P50991 539 aaKnown RBP28.22■■■□□ 2.11
BRD3-202ENST00000371834 PRKCSHP14314 528 aaPredicted RBP28.21■■■□□ 2.11
BRD3-202ENST00000371834 SSFA2P28290 1259 aa28.21■■■□□ 2.11
BRD3-202ENST00000371834 RABEP1Q15276 862 aa28.21■■■□□ 2.11
BRD3-202ENST00000371834 ARHGAP23Q9P227 1491 aa28.21■■■□□ 2.11
BRD3-202ENST00000371834 SLIT1O75093 1534 aa28.21■■■□□ 2.11
BRD3-202ENST00000371834 HMMRO75330 724 aa28.2■■■□□ 2.11
BRD3-202ENST00000371834 STK31Q9BXU1 1019 aa28.19■■■□□ 2.1
BRD3-202ENST00000371834 LTV1Q96GA3 475 aaPredicted RBP28.18■■■□□ 2.1
BRD3-202ENST00000371834 EXOC6BQ9Y2D4 811 aa28.18■■■□□ 2.1
BRD3-202ENST00000371834 HOXC9P31274 260 aa28.18■■■□□ 2.1
BRD3-202ENST00000371834 GNAT3A8MTJ3 354 aa28.17■■■□□ 2.1
BRD3-202ENST00000371834 EIF5BO60841 1220 aaKnown RBP28.17■■■□□ 2.1
BRD3-202ENST00000371834 GNAI2P04899 355 aa28.17■■■□□ 2.1
BRD3-202ENST00000371834 CASC1Q6TDU7 716 aa28.17■■■□□ 2.1
BRD3-202ENST00000371834 FLIIQ13045 1269 aa28.16■■■□□ 2.1
BRD3-202ENST00000371834 FKBP5Q13451 457 aaPredicted RBP28.16■■■□□ 2.1
BRD3-202ENST00000371834 ZBTB4Q9P1Z0 1013 aaPredicted RBP28.16■■■□□ 2.1
BRD3-202ENST00000371834 TSHZ3Q63HK5 1081 aa28.15■■■□□ 2.1
BRD3-202ENST00000371834 KCNA6P17658 529 aa28.15■■■□□ 2.1
BRD3-202ENST00000371834 PDE1AP54750 535 aa28.15■■■□□ 2.1
BRD3-202ENST00000371834 IL17REQ8NFR9 667 aa28.14■■■□□ 2.1
BRD3-202ENST00000371834 RRAGDQ9NQL2 400 aaPredicted RBP28.14■■■□□ 2.1
BRD3-202ENST00000371834 HTATSF1O43719 755 aaKnown RBP28.13■■■□□ 2.09
BRD3-202ENST00000371834 CCDC30Q5VVM6 783 aa28.13■■■□□ 2.09
BRD3-202ENST00000371834 THEMISQ8N1K5 641 aaPredicted RBP28.13■■■□□ 2.09
BRD3-202ENST00000371834 MRE11P49959 708 aa28.13■■■□□ 2.09
BRD3-202ENST00000371834 ABTB2Q8N961 1025 aa28.12■■■□□ 2.09
BRD3-202ENST00000371834 PNMA6EA0A0J9YXQ4 647 aa28.12■■■□□ 2.09
BRD3-202ENST00000371834 GRPEL1Q9HAV7 217 aa28.12■■■□□ 2.09
BRD3-202ENST00000371834 AK9Q5TCS8 1911 aa28.11■■■□□ 2.09
BRD3-202ENST00000371834 USHBP1Q8N6Y0 703 aa28.11■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 131.1 ms