RNA–Protein interactions for RNA: ENST00000370656.5

RPF1-202, Transcript of ribosome production factor 1 homolog, humanhuman

TSL 2 BASIC

Gene RPF1, Length 724 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPF1-202ENST00000370656 AKT1S1Q96B36 256 aa21.25■□□□□ 0.99
RPF1-202ENST00000370656 GOLGB1Q14789 3259 aaKnown RBP21.24■□□□□ 0.99
RPF1-202ENST00000370656 PELP1Q8IZL8 1130 aaKnown RBP21.24■□□□□ 0.99
RPF1-202ENST00000370656 SYTL4Q96C24 671 aaPredicted RBP21.23■□□□□ 0.99
RPF1-202ENST00000370656 TFCP2L1Q9NZI6 479 aa21.23■□□□□ 0.99
RPF1-202ENST00000370656 COL24A1Q17RW2 1714 aa21.23■□□□□ 0.99
RPF1-202ENST00000370656 LTV1Q96GA3 475 aaPredicted RBP21.22■□□□□ 0.99
RPF1-202ENST00000370656 PUS7Q96PZ0 661 aaKnown RBP21.22■□□□□ 0.99
RPF1-202ENST00000370656 A0A1W2PP64 1363 aa21.22■□□□□ 0.99
RPF1-202ENST00000370656 DOT1LQ8TEK3 1739 aa21.21■□□□□ 0.99
RPF1-202ENST00000370656 TUBGCP6Q96RT7 1819 aa21.2■□□□□ 0.98
RPF1-202ENST00000370656 PNPLA7Q6ZV29 1317 aa21.2■□□□□ 0.98
RPF1-202ENST00000370656 LY75O60449 1722 aa21.2■□□□□ 0.98
RPF1-202ENST00000370656 SHANK3Q9BYB0 1731 aa21.2■□□□□ 0.98
RPF1-202ENST00000370656 ANKRD36BQ8N2N9 1353 aa21.2■□□□□ 0.98
RPF1-202ENST00000370656 PRIM1P49642 420 aaKnown RBP21.19■□□□□ 0.98
RPF1-202ENST00000370656 COG3Q96JB2 828 aa21.19■□□□□ 0.98
RPF1-202ENST00000370656 AMPHP49418 695 aa21.17■□□□□ 0.98
RPF1-202ENST00000370656 ZCRB1Q8TBF4 217 aaKnown RBP21.16■□□□□ 0.98
RPF1-202ENST00000370656 TIMELESSQ9UNS1 1208 aa21.16■□□□□ 0.98
RPF1-202ENST00000370656 RGPD2P0DJD1 1756 aa21.15■□□□□ 0.98
RPF1-202ENST00000370656 PPP4R3CPQ6ZMV5 832 aa21.15■□□□□ 0.98
RPF1-202ENST00000370656 MAP3K19Q56UN5 1328 aa21.14■□□□□ 0.97
RPF1-202ENST00000370656 SLC24A1O60721 1099 aa21.14■□□□□ 0.97
RPF1-202ENST00000370656 HMGB2P26583 209 aaKnown RBP21.14■□□□□ 0.97
RPF1-202ENST00000370656 HOXC9P31274 260 aa21.14■□□□□ 0.97
RPF1-202ENST00000370656 KCNQ4P56696 695 aa21.14■□□□□ 0.97
RPF1-202ENST00000370656 CCNL1Q9UK58 526 aaPredicted RBP21.14■□□□□ 0.97
RPF1-202ENST00000370656 GRIN3BO60391 1043 aa21.13■□□□□ 0.97
RPF1-202ENST00000370656 USP47Q96K76 1375 aa21.12■□□□□ 0.97
RPF1-202ENST00000370656 TONSLQ96HA7 1378 aa21.11■□□□□ 0.97
RPF1-202ENST00000370656 CGNL1Q0VF96 1302 aa21.11■□□□□ 0.97
RPF1-202ENST00000370656 NLGN2Q8NFZ4 835 aa21.11■□□□□ 0.97
RPF1-202ENST00000370656 RTL1A6NKG5 1358 aa21.1■□□□□ 0.97
RPF1-202ENST00000370656 NSD2O96028 1365 aa21.1■□□□□ 0.97
RPF1-202ENST00000370656 MEGF6O75095 1541 aa21.09■□□□□ 0.97
RPF1-202ENST00000370656 SMG6Q86US8 1419 aaKnown RBP21.09■□□□□ 0.97
RPF1-202ENST00000370656 CEP350Q5VT06 3117 aa21.08■□□□□ 0.97
RPF1-202ENST00000370656 RAPGEF4Q8WZA2 1011 aa21.08■□□□□ 0.97
RPF1-202ENST00000370656 COL23A1Q86Y22 540 aaPredicted RBP21.07■□□□□ 0.96
RPF1-202ENST00000370656 C5P01031 1676 aa21.07■□□□□ 0.96
RPF1-202ENST00000370656 HOXD11P31277 338 aaPredicted RBP21.06■□□□□ 0.96
RPF1-202ENST00000370656 FLAD1Q8NFF5 587 aa21.06■□□□□ 0.96
RPF1-202ENST00000370656 FBLN1P23142 703 aa21.05■□□□□ 0.96
RPF1-202ENST00000370656 NBPF6Q5VWK0 638 aa21.05■□□□□ 0.96
RPF1-202ENST00000370656 NBPF4Q96M43 638 aa21.05■□□□□ 0.96
RPF1-202ENST00000370656 TESK2Q96S53 571 aa21.05■□□□□ 0.96
RPF1-202ENST00000370656 ST20-MTHFSA0A0A6YYL1 179 aa21.04■□□□□ 0.96
RPF1-202ENST00000370656 YBX3P16989 372 aaKnown RBP eCLIP21.04■□□□□ 0.96
RPF1-202ENST00000370656 TATP17735 454 aaPredicted RBP21.04■□□□□ 0.96
RPF1-202ENST00000370656 ATP10DQ9P241 1426 aa21.04■□□□□ 0.96
RPF1-202ENST00000370656 RRS1Q15050 365 aaKnown RBP21.03■□□□□ 0.96
RPF1-202ENST00000370656 TAF1LQ8IZX4 1826 aa21.03■□□□□ 0.96
RPF1-202ENST00000370656 PCDH11XQ9BZA7 1347 aa21.03■□□□□ 0.96
RPF1-202ENST00000370656 PCDH11YQ9BZA8 1340 aa21.03■□□□□ 0.96
RPF1-202ENST00000370656 MSL1Q68DK7 614 aa21.02■□□□□ 0.96
RPF1-202ENST00000370656 CD2APQ9Y5K6 639 aa21.02■□□□□ 0.96
RPF1-202ENST00000370656 USHBP1Q8N6Y0 703 aa21.01■□□□□ 0.95
RPF1-202ENST00000370656 PALLDQ8WX93 1383 aa20.99■□□□□ 0.95
RPF1-202ENST00000370656 FYB1O15117 783 aa20.99■□□□□ 0.95
RPF1-202ENST00000370656 GGNBP2Q9H3C7 697 aa20.99■□□□□ 0.95
RPF1-202ENST00000370656 KIF20BQ96Q89 1820 aa20.99■□□□□ 0.95
RPF1-202ENST00000370656 MPRIPQ6WCQ1 1025 aa20.98■□□□□ 0.95
RPF1-202ENST00000370656 SMARCC1Q92922 1105 aaPredicted RBP20.98■□□□□ 0.95
RPF1-202ENST00000370656 INSRP06213 1382 aa20.97■□□□□ 0.95
RPF1-202ENST00000370656 ITGB4P16144 1822 aa20.97■□□□□ 0.95
RPF1-202ENST00000370656 TMF1P82094 1093 aa20.97■□□□□ 0.95
RPF1-202ENST00000370656 GPBP1L1Q9HC44 474 aaPredicted RBP20.97■□□□□ 0.95
RPF1-202ENST00000370656 FLT4P35916 1363 aa20.97■□□□□ 0.95
RPF1-202ENST00000370656 KIF24Q5T7B8 1368 aa20.97■□□□□ 0.95
RPF1-202ENST00000370656 NSD3Q9BZ95 1437 aa20.96■□□□□ 0.95
RPF1-202ENST00000370656 C4BP0C0L5 1744 aa20.96■□□□□ 0.95
RPF1-202ENST00000370656 AK7Q96M32 723 aa20.96■□□□□ 0.95
RPF1-202ENST00000370656 HSP90AB2PQ58FF8 381 aa20.95■□□□□ 0.94
RPF1-202ENST00000370656 ZNF526Q8TF50 670 aaPredicted RBP20.95■□□□□ 0.94
RPF1-202ENST00000370656 RNF39Q9H2S5 420 aa20.94■□□□□ 0.94
RPF1-202ENST00000370656 CDCA8Q53HL2 280 aa20.93■□□□□ 0.94
RPF1-202ENST00000370656 UBR3Q6ZT12 1888 aa20.92■□□□□ 0.94
RPF1-202ENST00000370656 HSPA6P17066 643 aa20.92■□□□□ 0.94
RPF1-202ENST00000370656 PKD1L3Q7Z443 1732 aa20.92■□□□□ 0.94
RPF1-202ENST00000370656 TOGARAM1Q9Y4F4 1720 aa20.92■□□□□ 0.94
RPF1-202ENST00000370656 CYP27B1O15528 508 aa20.91■□□□□ 0.94
RPF1-202ENST00000370656 PHF14O94880 888 aa20.89■□□□□ 0.93
RPF1-202ENST00000370656 SPG7Q9UQ90 795 aa20.89■□□□□ 0.93
RPF1-202ENST00000370656 ADCY9O60503 1353 aa20.88■□□□□ 0.93
RPF1-202ENST00000370656 IGSF1Q8N6C5 1336 aa20.88■□□□□ 0.93
RPF1-202ENST00000370656 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.88■□□□□ 0.93
RPF1-202ENST00000370656 SSFA2P28290 1259 aa20.88■□□□□ 0.93
RPF1-202ENST00000370656 PIGBQ92521 554 aa20.87■□□□□ 0.93
RPF1-202ENST00000370656 NKX1-1Q15270 411 aaPredicted RBP20.86■□□□□ 0.93
RPF1-202ENST00000370656 MAP2P11137 1827 aaKnown RBP20.85■□□□□ 0.93
RPF1-202ENST00000370656 LOC102724428A0A0B4J2F2 783 aa20.85■□□□□ 0.93
RPF1-202ENST00000370656 PPM1GO15355 546 aaPredicted RBP20.85■□□□□ 0.93
RPF1-202ENST00000370656 SIK1P57059 783 aa20.85■□□□□ 0.93
RPF1-202ENST00000370656 TMOD3Q9NYL9 352 aa20.85■□□□□ 0.93
RPF1-202ENST00000370656 WWC3Q9ULE0 1092 aa20.85■□□□□ 0.93
RPF1-202ENST00000370656 EMILIN1Q9Y6C2 1016 aa20.84■□□□□ 0.93
RPF1-202ENST00000370656 AMIGO3Q86WK7 504 aa20.83■□□□□ 0.93
RPF1-202ENST00000370656 CNKSR2Q8WXI2 1034 aa20.83■□□□□ 0.93
RPF1-202ENST00000370656 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.83■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms