RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 MAP3K11Q16584 847 aa14.58□□□□□ -0.08
HCFC1-202ENST00000369984 CHD1LQ86WJ1 897 aa14.58□□□□□ -0.08
HCFC1-202ENST00000369984 NLRP6P59044 892 aa14.58□□□□□ -0.08
HCFC1-202ENST00000369984 GRIPAP1Q4V328 841 aa14.58□□□□□ -0.08
HCFC1-202ENST00000369984 PRKAR2BP31323 418 aa14.58□□□□□ -0.08
HCFC1-202ENST00000369984 CAMK4Q16566 473 aa14.58□□□□□ -0.08
HCFC1-202ENST00000369984 SCAPERQ9BY12 1400 aa14.57□□□□□ -0.08
HCFC1-202ENST00000369984 SF3B2Q13435 895 aaKnown RBP14.57□□□□□ -0.08
HCFC1-202ENST00000369984 PLEKHO1Q53GL0 409 aaPredicted RBP14.57□□□□□ -0.08
HCFC1-202ENST00000369984 CASTP20810 708 aaKnown RBP14.57□□□□□ -0.08
HCFC1-202ENST00000369984 MCM3P25205 808 aa14.57□□□□□ -0.08
HCFC1-202ENST00000369984 CEP131Q9UPN4 1083 aa14.57□□□□□ -0.08
HCFC1-202ENST00000369984 JAKMIP1Q96N16 626 aaKnown RBP14.56□□□□□ -0.08
HCFC1-202ENST00000369984 RBM42Q9BTD8 480 aaKnown RBP14.56□□□□□ -0.08
HCFC1-202ENST00000369984 BACH2Q9BYV9 841 aa14.56□□□□□ -0.08
HCFC1-202ENST00000369984 BCAR3O75815 825 aa14.56□□□□□ -0.08
HCFC1-202ENST00000369984 TDO2P48775 406 aa14.56□□□□□ -0.08
HCFC1-202ENST00000369984 PTPN14Q15678 1187 aa14.56□□□□□ -0.08
HCFC1-202ENST00000369984 AACSQ86V21 672 aa14.56□□□□□ -0.08
HCFC1-202ENST00000369984 GBP3Q9H0R5 595 aa14.56□□□□□ -0.08
HCFC1-202ENST00000369984 GOPCQ9HD26 462 aa14.56□□□□□ -0.08
HCFC1-202ENST00000369984 MYL6BP14649 208 aa14.56□□□□□ -0.08
HCFC1-202ENST00000369984 IMMTQ16891 758 aaKnown RBP14.56□□□□□ -0.08
HCFC1-202ENST00000369984 RBM5P52756 815 aaKnown RBP eCLIP14.56□□□□□ -0.081e-6■□□□□ 10
HCFC1-202ENST00000369984 TSR2Q969E8 191 aaKnown RBP14.56□□□□□ -0.08
HCFC1-202ENST00000369984 DDX11Q96FC9 970 aa14.56□□□□□ -0.08
HCFC1-202ENST00000369984 ANAPC15P60006 121 aa14.56□□□□□ -0.08
HCFC1-202ENST00000369984 GPRASP1Q5JY77 1395 aa14.56□□□□□ -0.08
HCFC1-202ENST00000369984 HDGFL1Q5TGJ6 251 aa14.56□□□□□ -0.08
HCFC1-202ENST00000369984 UBAC1Q9BSL1 405 aa14.56□□□□□ -0.08
HCFC1-202ENST00000369984 ZNF76P36508 570 aa14.55□□□□□ -0.08
HCFC1-202ENST00000369984 SPATA24Q86W54 205 aa14.55□□□□□ -0.08
HCFC1-202ENST00000369984 SPA17Q15506 151 aa14.55□□□□□ -0.08
HCFC1-202ENST00000369984 CFAP57Q96MR6 1250 aa14.55□□□□□ -0.08
HCFC1-202ENST00000369984 KIF21BO75037 1637 aa14.55□□□□□ -0.08
HCFC1-202ENST00000369984 MPHOSPH8Q99549 860 aa14.55□□□□□ -0.08
HCFC1-202ENST00000369984 KIF5CO60282 957 aa14.55□□□□□ -0.08
HCFC1-202ENST00000369984 POTEJP0CG39 1038 aa14.55□□□□□ -0.08
HCFC1-202ENST00000369984 CBX1P83916 185 aa14.54□□□□□ -0.08
HCFC1-202ENST00000369984 WASF1Q92558 559 aa14.54□□□□□ -0.08
HCFC1-202ENST00000369984 PPP1R12BO60237 982 aaPredicted RBP14.54□□□□□ -0.08
HCFC1-202ENST00000369984 PPP2R1AP30153 589 aa14.54□□□□□ -0.08
HCFC1-202ENST00000369984 KIF18AQ8NI77 898 aa14.54□□□□□ -0.08
HCFC1-202ENST00000369984 DDX23Q9BUQ8 820 aaKnown RBP14.54□□□□□ -0.08
HCFC1-202ENST00000369984 PIBF1Q8WXW3 757 aa14.54□□□□□ -0.08
HCFC1-202ENST00000369984 FGD6Q6ZV73 1430 aa14.54□□□□□ -0.08
HCFC1-202ENST00000369984 KIF2AO00139 706 aaPredicted RBP14.54□□□□□ -0.08
HCFC1-202ENST00000369984 TMEM132EQ6IEE7 984 aa14.54□□□□□ -0.08
HCFC1-202ENST00000369984 ZSCAN12O43309 604 aa14.53□□□□□ -0.08
HCFC1-202ENST00000369984 TRERF1Q96PN7 1200 aa14.53□□□□□ -0.08
HCFC1-202ENST00000369984 MCM4P33991 863 aa14.53□□□□□ -0.08
HCFC1-202ENST00000369984 MPHOSPH10O00566 681 aaKnown RBP14.53□□□□□ -0.08
HCFC1-202ENST00000369984 SFPQP23246 707 aaKnown RBP eCLIP14.53□□□□□ -0.08
HCFC1-202ENST00000369984 IFFO1Q0D2I5 559 aa14.53□□□□□ -0.08
HCFC1-202ENST00000369984 KRT32Q14532 448 aa14.53□□□□□ -0.08
HCFC1-202ENST00000369984 ZSCAN31Q96LW9 406 aaPredicted RBP14.53□□□□□ -0.08
HCFC1-202ENST00000369984 PPP6R1Q9UPN7 881 aa14.53□□□□□ -0.08
HCFC1-202ENST00000369984 PDIA4P13667 645 aaKnown RBP14.53□□□□□ -0.08
HCFC1-202ENST00000369984 MVPQ14764 893 aaKnown RBP14.53□□□□□ -0.08
HCFC1-202ENST00000369984 CCDC178Q5BJE1 867 aa14.53□□□□□ -0.08
HCFC1-202ENST00000369984 PTPRGP23470 1445 aa14.52□□□□□ -0.08
HCFC1-202ENST00000369984 CETN2P41208 172 aa14.52□□□□□ -0.08
HCFC1-202ENST00000369984 CTNNA3Q9UI47 895 aa14.52□□□□□ -0.08
HCFC1-202ENST00000369984 ZSCAN30Q86W11 494 aa14.52□□□□□ -0.08
HCFC1-202ENST00000369984 RAI14Q9P0K7 980 aa14.52□□□□□ -0.08
HCFC1-202ENST00000369984 PPM1FP49593 454 aaPredicted RBP14.52□□□□□ -0.09
HCFC1-202ENST00000369984 CIZ1Q9ULV3 898 aaPredicted RBP14.52□□□□□ -0.09
HCFC1-202ENST00000369984 ATF7IPQ6VMQ6 1270 aa14.52□□□□□ -0.09
HCFC1-202ENST00000369984 CGNQ9P2M7 1197 aaKnown RBP14.52□□□□□ -0.09
HCFC1-202ENST00000369984 CABP4P57796 275 aa14.52□□□□□ -0.09
HCFC1-202ENST00000369984 DNAI2Q9GZS0 605 aa14.52□□□□□ -0.09
HCFC1-202ENST00000369984 STAC3Q96MF2 364 aa14.51□□□□□ -0.09
HCFC1-202ENST00000369984 GCOM1H8Y6P7 765 aaPredicted RBP14.51□□□□□ -0.09
HCFC1-202ENST00000369984 CLGNO14967 610 aa14.51□□□□□ -0.09
HCFC1-202ENST00000369984 MYZAPP0CAP1 466 aa14.51□□□□□ -0.09
HCFC1-202ENST00000369984 USP5P45974 858 aa14.51□□□□□ -0.09
HCFC1-202ENST00000369984 SPINK5Q9NQ38 1064 aaPredicted RBP14.51□□□□□ -0.09
HCFC1-202ENST00000369984 RUSC2Q8N2Y8 1516 aa14.51□□□□□ -0.09
HCFC1-202ENST00000369984 LUZP1Q86V48 1076 aa14.51□□□□□ -0.09
HCFC1-202ENST00000369984 CCDC183Q5T5S1 534 aa14.5□□□□□ -0.09
HCFC1-202ENST00000369984 SRGAP3O43295 1099 aa14.5□□□□□ -0.09
HCFC1-202ENST00000369984 UBE4AQ14139 1066 aa14.5□□□□□ -0.09
HCFC1-202ENST00000369984 FKBP15Q5T1M5 1219 aa14.5□□□□□ -0.09
HCFC1-202ENST00000369984 MICALCLQ6ZW33 695 aa14.5□□□□□ -0.09
HCFC1-202ENST00000369984 PPP1R1BQ9UD71 204 aaPredicted RBP14.5□□□□□ -0.09
HCFC1-202ENST00000369984 SEC63Q9UGP8 760 aaKnown RBP14.5□□□□□ -0.09
HCFC1-202ENST00000369984 GSTTP1A0A1W2PQM5 241 aa14.5□□□□□ -0.09
HCFC1-202ENST00000369984 KLHL10Q6JEL2 608 aa14.5□□□□□ -0.09
HCFC1-202ENST00000369984 STRN4Q9NRL3 753 aa14.5□□□□□ -0.09
HCFC1-202ENST00000369984 CACNA2D4Q7Z3S7 1137 aa14.49□□□□□ -0.09
HCFC1-202ENST00000369984 ESCO1Q5FWF5 840 aa14.49□□□□□ -0.09
HCFC1-202ENST00000369984 RNF187Q5TA31 235 aaPredicted RBP14.49□□□□□ -0.09
HCFC1-202ENST00000369984 POLR3GO15318 223 aaPredicted RBP14.49□□□□□ -0.09
HCFC1-202ENST00000369984 VPS36Q86VN1 386 aa14.49□□□□□ -0.09
HCFC1-202ENST00000369984 ZSCAN29Q8IWY8 852 aaPredicted RBP14.49□□□□□ -0.09
HCFC1-202ENST00000369984 LRRC9Q6ZRR7 1453 aa14.48□□□□□ -0.09
HCFC1-202ENST00000369984 PUS7Q96PZ0 661 aaKnown RBP14.48□□□□□ -0.09
HCFC1-202ENST00000369984 CALCOCO1Q9P1Z2 691 aa14.48□□□□□ -0.09
HCFC1-202ENST00000369984 NUP88Q99567 741 aaPredicted RBP14.48□□□□□ -0.09
HCFC1-202ENST00000369984 TSG101Q99816 390 aa14.48□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms