RNA–Protein interactions for RNA: ENST00000368299.7

LMNA-205, Transcript of lamin A/C, humanhuman

TSL 1 (best) BASIC

Gene LMNA, Length 2,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNA-205ENST00000368299 API5Q9BZZ5 524 aaKnown RBP22.16■■□□□ 1.14
LMNA-205ENST00000368299 IP6K1Q92551 441 aa22.15■■□□□ 1.14
LMNA-205ENST00000368299 NPM2Q86SE8 214 aaKnown RBP22.15■■□□□ 1.14
LMNA-205ENST00000368299 ABCC4O15439 1325 aa22.14■■□□□ 1.14
LMNA-205ENST00000368299 C19orf44Q9H6X5 657 aa22.14■■□□□ 1.14
LMNA-205ENST00000368299 PDZRN3Q9UPQ7 1066 aa22.14■■□□□ 1.13
LMNA-205ENST00000368299 LTN1O94822 1766 aa22.13■■□□□ 1.13
LMNA-205ENST00000368299 PHRF1Q9P1Y6 1649 aaKnown RBP22.12■■□□□ 1.13
LMNA-205ENST00000368299 FOXO3O43524 673 aa22.12■■□□□ 1.13
LMNA-205ENST00000368299 ORAI2Q96SN7 254 aa22.12■■□□□ 1.13
LMNA-205ENST00000368299 KIF1AQ12756 1690 aa22.11■■□□□ 1.13
LMNA-205ENST00000368299 GNAT3A8MTJ3 354 aa22.1■■□□□ 1.13
LMNA-205ENST00000368299 ZBTB7BO15156 539 aaPredicted RBP22.1■■□□□ 1.13
LMNA-205ENST00000368299 NCOA3Q9Y6Q9 1424 aa22.09■■□□□ 1.13
LMNA-205ENST00000368299 SMC5Q8IY18 1101 aa22.09■■□□□ 1.13
LMNA-205ENST00000368299 C1orf167Q5SNV9 1468 aa22.09■■□□□ 1.13
LMNA-205ENST00000368299 LTV1Q96GA3 475 aaPredicted RBP22.09■■□□□ 1.13
LMNA-205ENST00000368299 DDRGK1Q96HY6 314 aa22.09■■□□□ 1.13
LMNA-205ENST00000368299 TSPYL4Q9UJ04 414 aa22.09■■□□□ 1.13
LMNA-205ENST00000368299 SLIT3O75094 1523 aa22.08■■□□□ 1.13
LMNA-205ENST00000368299 NBR1Q14596 966 aa22.08■■□□□ 1.13
LMNA-205ENST00000368299 MAP3K5Q99683 1374 aa22.08■■□□□ 1.12
LMNA-205ENST00000368299 LRRC37A3O60309 1634 aa22.07■■□□□ 1.12
LMNA-205ENST00000368299 BABAM1Q9NWV8 329 aa22.07■■□□□ 1.12
LMNA-205ENST00000368299 DCCP43146 1447 aa22.07■■□□□ 1.12
LMNA-205ENST00000368299 PTPRCP08575 1304 aa22.06■■□□□ 1.12
LMNA-205ENST00000368299 VIRMAQ69YN4 1812 aaKnown RBP22.06■■□□□ 1.12
LMNA-205ENST00000368299 DEKP35659 375 aaKnown RBP22.06■■□□□ 1.12
LMNA-205ENST00000368299 MST1RQ04912 1400 aa22.06■■□□□ 1.12
LMNA-205ENST00000368299 GCP02774 474 aa22.05■■□□□ 1.12
LMNA-205ENST00000368299 KRT24Q2M2I5 525 aa22.05■■□□□ 1.12
LMNA-205ENST00000368299 KRT28Q7Z3Y7 464 aa22.05■■□□□ 1.12
LMNA-205ENST00000368299 USP19O94966 1318 aa22.05■■□□□ 1.12
LMNA-205ENST00000368299 TRPM3Q9HCF6 1732 aaPredicted RBP22.05■■□□□ 1.12
LMNA-205ENST00000368299 SOS1Q07889 1333 aaPredicted RBP22.04■■□□□ 1.12
LMNA-205ENST00000368299 ATF3P18847 181 aa22.04■■□□□ 1.12
LMNA-205ENST00000368299 ARHGEF25Q86VW2 580 aa22.04■■□□□ 1.12
LMNA-205ENST00000368299 INTS3Q68E01 1043 aaKnown RBP22.03■■□□□ 1.12
LMNA-205ENST00000368299 MSH6P52701 1360 aa22.02■■□□□ 1.12
LMNA-205ENST00000368299 NBPF6Q5VWK0 638 aa22.02■■□□□ 1.12
LMNA-205ENST00000368299 NBPF4Q96M43 638 aa22.02■■□□□ 1.12
LMNA-205ENST00000368299 TMEM94Q12767 1356 aa22.02■■□□□ 1.12
LMNA-205ENST00000368299 XPCQ01831 940 aaPredicted RBP22.01■■□□□ 1.11
LMNA-205ENST00000368299 MIS18AQ9NYP9 233 aa22.01■■□□□ 1.11
LMNA-205ENST00000368299 GCC1Q96CN9 775 aa22.01■■□□□ 1.11
LMNA-205ENST00000368299 TAF7Q15545 349 aaPredicted RBP22■■□□□ 1.11
LMNA-205ENST00000368299 LMOD2Q6P5Q4 547 aa22■■□□□ 1.11
LMNA-205ENST00000368299 USHBP1Q8N6Y0 703 aa22■■□□□ 1.11
LMNA-205ENST00000368299 IL17REQ8NFR9 667 aa22■■□□□ 1.11
LMNA-205ENST00000368299 RGS12O14924 1447 aa21.99■■□□□ 1.11
LMNA-205ENST00000368299 NUCB1Q02818 461 aa21.99■■□□□ 1.11
LMNA-205ENST00000368299 SLC4A2P04920 1241 aa21.99■■□□□ 1.11
LMNA-205ENST00000368299 ZBTB7CA1YPR0 619 aa21.98■■□□□ 1.11
LMNA-205ENST00000368299 NCAPD2Q15021 1401 aa21.98■■□□□ 1.11
LMNA-205ENST00000368299 RTL5Q5HYW3 569 aaPredicted RBP21.97■■□□□ 1.11
LMNA-205ENST00000368299 CADPS2Q86UW7 1296 aa21.97■■□□□ 1.11
LMNA-205ENST00000368299 CEMIPQ8WUJ3 1361 aa21.97■■□□□ 1.11
LMNA-205ENST00000368299 STK31Q9BXU1 1019 aa21.96■■□□□ 1.11
LMNA-205ENST00000368299 AMOTQ4VCS5 1084 aa21.96■■□□□ 1.11
LMNA-205ENST00000368299 CCDC30Q5VVM6 783 aa21.95■■□□□ 1.1
LMNA-205ENST00000368299 STRCP1A6NGW2 1772 aa21.95■■□□□ 1.1
LMNA-205ENST00000368299 ALS2Q96Q42 1657 aa21.95■■□□□ 1.1
LMNA-205ENST00000368299 PLEKHO1Q53GL0 409 aaPredicted RBP21.95■■□□□ 1.1
LMNA-205ENST00000368299 CHD1LQ86WJ1 897 aa21.95■■□□□ 1.1
LMNA-205ENST00000368299 C1orf115Q9H7X2 142 aa21.94■■□□□ 1.1
LMNA-205ENST00000368299 ANKRD24Q8TF21 1146 aa21.94■■□□□ 1.1
LMNA-205ENST00000368299 UPF2Q9HAU5 1272 aaKnown RBP21.93■■□□□ 1.1
LMNA-205ENST00000368299 AKAP4Q5JQC9 854 aa21.92■■□□□ 1.1
LMNA-205ENST00000368299 LRRC59Q96AG4 307 aaKnown RBP21.92■■□□□ 1.1
LMNA-205ENST00000368299 NPHP3Q7Z494 1330 aa21.92■■□□□ 1.1
LMNA-205ENST00000368299 MED1Q15648 1581 aaPredicted RBP21.91■■□□□ 1.1
LMNA-205ENST00000368299 SIRT2Q8IXJ6 389 aa21.91■■□□□ 1.1
LMNA-205ENST00000368299 CHMP4AQ9BY43 222 aa21.91■■□□□ 1.1
LMNA-205ENST00000368299 CAMTA1Q9Y6Y1 1673 aa21.91■■□□□ 1.1
LMNA-205ENST00000368299 CCT4P50991 539 aaKnown RBP21.91■■□□□ 1.1
LMNA-205ENST00000368299 RPAP2Q8IXW5 612 aaPredicted RBP21.9■■□□□ 1.1
LMNA-205ENST00000368299 LMO7Q8WWI1 1683 aa21.9■■□□□ 1.1
LMNA-205ENST00000368299 RGPD2P0DJD1 1756 aa21.9■■□□□ 1.1
LMNA-205ENST00000368299 DAXXQ9UER7 740 aaPredicted RBP21.9■■□□□ 1.1
LMNA-205ENST00000368299 HSPA2P54652 639 aa21.89■■□□□ 1.09
LMNA-205ENST00000368299 ZNF530Q6P9A1 599 aaPredicted RBP21.89■■□□□ 1.09
LMNA-205ENST00000368299 LNPKQ9C0E8 428 aa21.89■■□□□ 1.09
LMNA-205ENST00000368299 OVOS2A0A0G2JMS6 1433 aa21.89■■□□□ 1.09
LMNA-205ENST00000368299 FAM208AQ9UK61 1670 aaKnown RBP21.88■■□□□ 1.09
LMNA-205ENST00000368299 SEC24BO95487 1268 aa21.88■■□□□ 1.09
LMNA-205ENST00000368299 HOXB7P09629 217 aa21.88■■□□□ 1.09
LMNA-205ENST00000368299 ANKRD45Q5TZF3 282 aa21.88■■□□□ 1.09
LMNA-205ENST00000368299 ANKRD44Q8N8A2 993 aa21.88■■□□□ 1.09
LMNA-205ENST00000368299 CACNA1FO60840 1977 aa21.88■■□□□ 1.09
LMNA-205ENST00000368299 C1orf141Q5JVX7 400 aa21.87■■□□□ 1.09
LMNA-205ENST00000368299 G2E3Q7L622 706 aa21.87■■□□□ 1.09
LMNA-205ENST00000368299 AXIN2Q9Y2T1 843 aa21.87■■□□□ 1.09
LMNA-205ENST00000368299 USP35Q9P2H5 1018 aa21.87■■□□□ 1.09
LMNA-205ENST00000368299 ERBB3P21860 1342 aa21.87■■□□□ 1.09
LMNA-205ENST00000368299 FLIIQ13045 1269 aa21.86■■□□□ 1.09
LMNA-205ENST00000368299 LMTK3Q96Q04 1460 aa21.86■■□□□ 1.09
LMNA-205ENST00000368299 ATP10DQ9P241 1426 aa21.86■■□□□ 1.09
LMNA-205ENST00000368299 PLEKHG5O94827 1062 aa21.86■■□□□ 1.09
LMNA-205ENST00000368299 TEFQ10587 303 aa21.86■■□□□ 1.09
LMNA-205ENST00000368299 DCTPP1Q9H773 170 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 108.4 ms