RNA–Protein interactions for RNA: ENST00000368273.8

PMF1-201, Transcript of polyamine modulated factor 1, humanhuman

TSL 2 BASIC

Gene PMF1, Length 884 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMF1-201ENST00000368273 USHBP1Q8N6Y0 703 aa17.68■□□□□ 0.42
PMF1-201ENST00000368273 BCL9O00512 1426 aa17.67■□□□□ 0.42
PMF1-201ENST00000368273 DEFB132Q7Z7B7 95 aa17.67■□□□□ 0.42
PMF1-201ENST00000368273 TNS1Q9HBL0 1735 aaKnown RBP17.67■□□□□ 0.42
PMF1-201ENST00000368273 BAG6P46379 1132 aa17.66■□□□□ 0.42
PMF1-201ENST00000368273 EIF4A2Q14240 407 aaKnown RBP17.66■□□□□ 0.42
PMF1-201ENST00000368273 MEGF6O75095 1541 aa17.66■□□□□ 0.42
PMF1-201ENST00000368273 NCAPD2Q15021 1401 aa17.65■□□□□ 0.42
PMF1-201ENST00000368273 RAPGEF4Q8WZA2 1011 aa17.65■□□□□ 0.42
PMF1-201ENST00000368273 EYA1Q99502 592 aa17.65■□□□□ 0.42
PMF1-201ENST00000368273 SBF2Q86WG5 1849 aa17.64■□□□□ 0.41
PMF1-201ENST00000368273 TATP17735 454 aaPredicted RBP17.63■□□□□ 0.41
PMF1-201ENST00000368273 MTHFSP49914 203 aa17.63■□□□□ 0.41
PMF1-201ENST00000368273 ZCRB1Q8TBF4 217 aaKnown RBP17.63■□□□□ 0.41
PMF1-201ENST00000368273 APBA3O96018 575 aa17.62■□□□□ 0.41
PMF1-201ENST00000368273 DDX54Q8TDD1 881 aaKnown RBP17.62■□□□□ 0.41
PMF1-201ENST00000368273 EN1Q05925 392 aaPredicted RBP17.61■□□□□ 0.41
PMF1-201ENST00000368273 BCL11BQ9C0K0 894 aaPredicted RBP17.61■□□□□ 0.41
PMF1-201ENST00000368273 HNRNPUQ00839 825 aaKnown RBP eCLIP17.6■□□□□ 0.41
PMF1-201ENST00000368273 IGSF1Q8N6C5 1336 aa17.6■□□□□ 0.41
PMF1-201ENST00000368273 SHANK3Q9BYB0 1731 aa17.6■□□□□ 0.41
PMF1-201ENST00000368273 PTF1AQ7RTS3 328 aa17.59■□□□□ 0.41
PMF1-201ENST00000368273 CAMKK2Q96RR4 588 aa17.59■□□□□ 0.41
PMF1-201ENST00000368273 IL13P35225 146 aa17.58■□□□□ 0.4
PMF1-201ENST00000368273 EZH2Q15910 746 aaKnown RBP17.57■□□□□ 0.4
PMF1-201ENST00000368273 NHSQ6T4R5 1651 aa17.57■□□□□ 0.4
PMF1-201ENST00000368273 PKD1L3Q7Z443 1732 aa17.56■□□□□ 0.4
PMF1-201ENST00000368273 PCDH11XQ9BZA7 1347 aa17.56■□□□□ 0.4
PMF1-201ENST00000368273 PCDH11YQ9BZA8 1340 aa17.56■□□□□ 0.4
PMF1-201ENST00000368273 KCNQ2O43526 872 aa17.56■□□□□ 0.4
PMF1-201ENST00000368273 WDR43Q15061 677 aaKnown RBP eCLIP17.56■□□□□ 0.4
PMF1-201ENST00000368273 ACSBG1Q96GR2 724 aa17.56■□□□□ 0.4
PMF1-201ENST00000368273 CFAP53Q96M91 514 aa17.56■□□□□ 0.4
PMF1-201ENST00000368273 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.56■□□□□ 0.4
PMF1-201ENST00000368273 PLEKHG2Q9H7P9 1386 aa17.55■□□□□ 0.4
PMF1-201ENST00000368273 SPG7Q9UQ90 795 aa17.55■□□□□ 0.4
PMF1-201ENST00000368273 PLSCR1O15162 318 aa17.54■□□□□ 0.4
PMF1-201ENST00000368273 CYP27B1O15528 508 aa17.54■□□□□ 0.4
PMF1-201ENST00000368273 ZBED9Q6R2W3 1325 aa17.53■□□□□ 0.4
PMF1-201ENST00000368273 DIAPH1O60610 1272 aaKnown RBP17.53■□□□□ 0.4
PMF1-201ENST00000368273 AEBP1Q8IUX7 1158 aa17.53■□□□□ 0.4
PMF1-201ENST00000368273 ADAMTS8Q9UP79 889 aa17.53■□□□□ 0.4
PMF1-201ENST00000368273 RGPD3A6NKT7 1758 aaPredicted RBP17.53■□□□□ 0.4
PMF1-201ENST00000368273 RGPD4Q7Z3J3 1758 aa17.53■□□□□ 0.4
PMF1-201ENST00000368273 KAT6BQ8WYB5 2073 aa17.52■□□□□ 0.4
PMF1-201ENST00000368273 COL3A1P02461 1466 aaPredicted RBP17.52■□□□□ 0.4
PMF1-201ENST00000368273 SULT6B1Q6IMI4 303 aa17.52■□□□□ 0.4
PMF1-201ENST00000368273 KDRP35968 1356 aa17.52■□□□□ 0.39
PMF1-201ENST00000368273 RREB1Q92766 1687 aa17.52■□□□□ 0.39
PMF1-201ENST00000368273 PRIM1P49642 420 aaKnown RBP17.51■□□□□ 0.39
PMF1-201ENST00000368273 DOT1LQ8TEK3 1739 aa17.51■□□□□ 0.39
PMF1-201ENST00000368273 BTAF1O14981 1849 aa17.5■□□□□ 0.39
PMF1-201ENST00000368273 NKX1-1Q15270 411 aaPredicted RBP17.5■□□□□ 0.39
PMF1-201ENST00000368273 PLEKHO1Q53GL0 409 aaPredicted RBP17.49■□□□□ 0.39
PMF1-201ENST00000368273 SYTL4Q96C24 671 aaPredicted RBP17.49■□□□□ 0.39
PMF1-201ENST00000368273 NUP188Q5SRE5 1749 aa17.48■□□□□ 0.39
PMF1-201ENST00000368273 PHKG2P15735 406 aa17.48■□□□□ 0.39
PMF1-201ENST00000368273 AMOTQ4VCS5 1084 aa17.48■□□□□ 0.39
PMF1-201ENST00000368273 IFNL2Q8IZJ0 200 aa17.48■□□□□ 0.39
PMF1-201ENST00000368273 PROM2Q8N271 834 aa17.48■□□□□ 0.39
PMF1-201ENST00000368273 HMOX1P09601 288 aa17.47■□□□□ 0.39
PMF1-201ENST00000368273 TXNRD1Q16881 649 aa17.46■□□□□ 0.39
PMF1-201ENST00000368273 TOGARAM1Q9Y4F4 1720 aa17.45■□□□□ 0.38
PMF1-201ENST00000368273 U2SURPO15042 1029 aaKnown RBP17.45■□□□□ 0.38
PMF1-201ENST00000368273 ZNF530Q6P9A1 599 aaPredicted RBP17.45■□□□□ 0.38
PMF1-201ENST00000368273 NUDCQ9Y266 331 aa17.45■□□□□ 0.38
PMF1-201ENST00000368273 NBPF14Q5TI25 921 aa17.44■□□□□ 0.38
PMF1-201ENST00000368273 HSP90AB1P08238 724 aaKnown RBP17.43■□□□□ 0.38
PMF1-201ENST00000368273 ITGB4P16144 1822 aa17.42■□□□□ 0.38
PMF1-201ENST00000368273 PSDA5PKW4 1024 aaPredicted RBP17.42■□□□□ 0.38
PMF1-201ENST00000368273 R3HDM1Q15032 1099 aaKnown RBP17.42■□□□□ 0.38
PMF1-201ENST00000368273 MPRIPQ6WCQ1 1025 aa17.42■□□□□ 0.38
PMF1-201ENST00000368273 C1orf141Q5JVX7 400 aa17.41■□□□□ 0.38
PMF1-201ENST00000368273 DCAF5Q96JK2 942 aa17.41■□□□□ 0.38
PMF1-201ENST00000368273 U2AF1L5P0DN76 240 aaPredicted RBP17.4■□□□□ 0.38
PMF1-201ENST00000368273 U2AF1Q01081 240 aaKnown RBP eCLIP17.4■□□□□ 0.38
PMF1-201ENST00000368273 CCDC146Q8IYE0 955 aa17.4■□□□□ 0.38
PMF1-201ENST00000368273 PIGBQ92521 554 aa17.4■□□□□ 0.38
PMF1-201ENST00000368273 LY75O60449 1722 aa17.39■□□□□ 0.37
PMF1-201ENST00000368273 ERVV-2B6SEH9 535 aa17.39■□□□□ 0.37
PMF1-201ENST00000368273 SLC27A3Q5K4L6 730 aa17.39■□□□□ 0.37
PMF1-201ENST00000368273 RUNDC1Q96C34 613 aa17.39■□□□□ 0.37
PMF1-201ENST00000368273 ANO8Q9HCE9 1232 aaPredicted RBP17.39■□□□□ 0.37
PMF1-201ENST00000368273 TMOD3Q9NYL9 352 aa17.39■□□□□ 0.37
PMF1-201ENST00000368273 KDM6AO15550 1401 aaPredicted RBP17.38■□□□□ 0.37
PMF1-201ENST00000368273 SENP3-EIF4A1A0A087X0R7 540 aa17.38■□□□□ 0.37
PMF1-201ENST00000368273 MTHFSDQ2M296 383 aaKnown RBP17.38■□□□□ 0.37
PMF1-201ENST00000368273 AKAP4Q5JQC9 854 aa17.38■□□□□ 0.37
PMF1-201ENST00000368273 LRRC4BQ9NT99 713 aa17.38■□□□□ 0.37
PMF1-201ENST00000368273 NGEFQ8N5V2 710 aa17.37■□□□□ 0.37
PMF1-201ENST00000368273 SMARCC1Q92922 1105 aaPredicted RBP17.37■□□□□ 0.37
PMF1-201ENST00000368273 RSPH6AQ9H0K4 717 aa17.37■□□□□ 0.37
PMF1-201ENST00000368273 APAF1O14727 1248 aa17.36■□□□□ 0.37
PMF1-201ENST00000368273 FCHSD2O94868 740 aa17.36■□□□□ 0.37
PMF1-201ENST00000368273 PRKAR2BP31323 418 aa17.36■□□□□ 0.37
PMF1-201ENST00000368273 STK32BQ9NY57 414 aa17.36■□□□□ 0.37
PMF1-201ENST00000368273 PALLDQ8WX93 1383 aa17.36■□□□□ 0.37
PMF1-201ENST00000368273 PAPPAQ13219 1627 aa17.36■□□□□ 0.37
PMF1-201ENST00000368273 CCNL1Q9UK58 526 aaPredicted RBP17.35■□□□□ 0.37
PMF1-201ENST00000368273 SALL2Q9Y467 1007 aaPredicted RBP17.35■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 175.4 ms