RNA–Protein interactions for RNA: ENST00000366857.9

CNIH4-202, Transcript of cornichon family AMPA receptor auxiliary protein 4, humanhuman

TSL 1 (best) BASIC

Gene CNIH4, Length 3,963 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNIH4-202ENST00000366857 TNNQ9UQP3 1299 aa12.25□□□□□ -0.45
CNIH4-202ENST00000366857 SENP3-EIF4A1A0A087X0R7 540 aa12.24□□□□□ -0.45
CNIH4-202ENST00000366857 RBM33Q96EV2 1170 aaKnown RBP12.24□□□□□ -0.45
CNIH4-202ENST00000366857 MTHFSDQ2M296 383 aaKnown RBP12.24□□□□□ -0.45
CNIH4-202ENST00000366857 MBIPQ9NS73 344 aa12.24□□□□□ -0.45
CNIH4-202ENST00000366857 BABAM1Q9NWV8 329 aa12.24□□□□□ -0.45
CNIH4-202ENST00000366857 ERBB3P21860 1342 aa12.23□□□□□ -0.45
CNIH4-202ENST00000366857 MRPL50Q8N5N7 158 aaKnown RBP12.23□□□□□ -0.45
CNIH4-202ENST00000366857 ZNF428Q96B54 188 aa12.23□□□□□ -0.45
CNIH4-202ENST00000366857 NHSQ6T4R5 1651 aa12.23□□□□□ -0.45
CNIH4-202ENST00000366857 PLIN1O60240 522 aa12.22□□□□□ -0.45
CNIH4-202ENST00000366857 U2AF1L5P0DN76 240 aaPredicted RBP12.22□□□□□ -0.45
CNIH4-202ENST00000366857 U2AF1Q01081 240 aaKnown RBP eCLIP12.22□□□□□ -0.45
CNIH4-202ENST00000366857 NBPF6Q5VWK0 638 aa12.22□□□□□ -0.45
CNIH4-202ENST00000366857 LRP10Q7Z4F1 713 aa12.22□□□□□ -0.45
CNIH4-202ENST00000366857 NBPF4Q96M43 638 aa12.22□□□□□ -0.45
CNIH4-202ENST00000366857 ARAP2Q8WZ64 1704 aa12.22□□□□□ -0.45
CNIH4-202ENST00000366857 ARHGAP45Q92619 1136 aa12.22□□□□□ -0.45
CNIH4-202ENST00000366857 RRP7AQ9Y3A4 280 aaKnown RBP12.22□□□□□ -0.45
CNIH4-202ENST00000366857 HSPA2P54652 639 aa12.22□□□□□ -0.45
CNIH4-202ENST00000366857 TSPYL6Q8N831 410 aa12.22□□□□□ -0.45
CNIH4-202ENST00000366857 CRBNQ96SW2 442 aa12.22□□□□□ -0.45
CNIH4-202ENST00000366857 SLIT2O94813 1529 aa12.22□□□□□ -0.45
CNIH4-202ENST00000366857 GCP02774 474 aa12.21□□□□□ -0.45
CNIH4-202ENST00000366857 MAP3K5Q99683 1374 aa12.21□□□□□ -0.45
CNIH4-202ENST00000366857 RIPK4P57078 832 aa12.21□□□□□ -0.46
CNIH4-202ENST00000366857 COL24A1Q17RW2 1714 aa12.21□□□□□ -0.46
CNIH4-202ENST00000366857 IL17REQ8NFR9 667 aa12.2□□□□□ -0.46
CNIH4-202ENST00000366857 FAM83GA6ND36 823 aa12.2□□□□□ -0.46
CNIH4-202ENST00000366857 PLPPR3Q6T4P5 718 aa12.2□□□□□ -0.46
CNIH4-202ENST00000366857 RGPD3A6NKT7 1758 aaPredicted RBP12.2□□□□□ -0.46
CNIH4-202ENST00000366857 RGPD4Q7Z3J3 1758 aa12.2□□□□□ -0.46
CNIH4-202ENST00000366857 TSR2Q969E8 191 aaKnown RBP12.2□□□□□ -0.46
CNIH4-202ENST00000366857 IRX6P78412 446 aaPredicted RBP12.19□□□□□ -0.46
CNIH4-202ENST00000366857 KCNH5Q8NCM2 988 aa12.19□□□□□ -0.46
CNIH4-202ENST00000366857 SSH1Q8WYL5 1049 aa12.19□□□□□ -0.46
CNIH4-202ENST00000366857 SOS1Q07889 1333 aaPredicted RBP12.19□□□□□ -0.46
CNIH4-202ENST00000366857 LRP5O75197 1615 aa12.18□□□□□ -0.46
CNIH4-202ENST00000366857 FOXO3O43524 673 aa12.18□□□□□ -0.46
CNIH4-202ENST00000366857 C8orf58Q8NAV2 365 aa12.18□□□□□ -0.46
CNIH4-202ENST00000366857 PNNQ9H307 717 aaKnown RBP12.18□□□□□ -0.46
CNIH4-202ENST00000366857 NUP98P52948 1817 aa12.18□□□□□ -0.46
CNIH4-202ENST00000366857 IGHDP01880 384 aa12.18□□□□□ -0.46
CNIH4-202ENST00000366857 AAMPQ13685 434 aa12.18□□□□□ -0.46
CNIH4-202ENST00000366857 CNGB1Q14028 1251 aaPredicted RBP12.18□□□□□ -0.46
CNIH4-202ENST00000366857 HMOX1P09601 288 aa12.17□□□□□ -0.46
CNIH4-202ENST00000366857 EXOSC9Q06265 439 aaKnown RBP12.17□□□□□ -0.46
CNIH4-202ENST00000366857 MYH3P11055 1940 aa12.17□□□□□ -0.46
CNIH4-202ENST00000366857 TRIM27P14373 513 aa12.17□□□□□ -0.46
CNIH4-202ENST00000366857 KRT28Q7Z3Y7 464 aa12.17□□□□□ -0.46
CNIH4-202ENST00000366857 SCN7AQ01118 1682 aa12.17□□□□□ -0.46
CNIH4-202ENST00000366857 SULT6B1Q6IMI4 303 aa12.17□□□□□ -0.46
CNIH4-202ENST00000366857 ZBTB40Q9NUA8 1239 aa12.17□□□□□ -0.46
CNIH4-202ENST00000366857 BRWD3Q6RI45 1802 aa12.16□□□□□ -0.46
CNIH4-202ENST00000366857 C4AP0C0L4 1744 aa12.16□□□□□ -0.46
CNIH4-202ENST00000366857 C4BP0C0L5 1744 aa12.16□□□□□ -0.46
CNIH4-202ENST00000366857 CADPS2Q86UW7 1296 aa12.15□□□□□ -0.46
CNIH4-202ENST00000366857 PCDHB15Q9Y5E8 787 aa12.15□□□□□ -0.46
CNIH4-202ENST00000366857 NUTM2FA1L443 756 aa12.15□□□□□ -0.46
CNIH4-202ENST00000366857 ABTB2Q8N961 1025 aa12.15□□□□□ -0.46
CNIH4-202ENST00000366857 MYH16Q9H6N6 1097 aa12.15□□□□□ -0.46
CNIH4-202ENST00000366857 AK9Q5TCS8 1911 aa12.15□□□□□ -0.46
CNIH4-202ENST00000366857 ZBTB7BO15156 539 aaPredicted RBP12.15□□□□□ -0.46
CNIH4-202ENST00000366857 ESCO1Q5FWF5 840 aa12.15□□□□□ -0.46
CNIH4-202ENST00000366857 NKX1-1Q15270 411 aaPredicted RBP12.14□□□□□ -0.47
CNIH4-202ENST00000366857 PROSER2Q86WR7 435 aaPredicted RBP12.14□□□□□ -0.47
CNIH4-202ENST00000366857 SIRT2Q8IXJ6 389 aa12.14□□□□□ -0.47
CNIH4-202ENST00000366857 DDX17Q92841 729 aaKnown RBP12.14□□□□□ -0.47
CNIH4-202ENST00000366857 THUMPD2Q9BTF0 503 aaKnown RBP12.14□□□□□ -0.47
CNIH4-202ENST00000366857 NLRP6P59044 892 aa12.14□□□□□ -0.47
CNIH4-202ENST00000366857 B4GALNT3Q6L9W6 998 aa12.14□□□□□ -0.47
CNIH4-202ENST00000366857 ZNF646O15015 1829 aaPredicted RBP12.14□□□□□ -0.47
CNIH4-202ENST00000366857 MYH14Q7Z406 1995 aaKnown RBP12.13□□□□□ -0.47
CNIH4-202ENST00000366857 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.13□□□□□ -0.47
CNIH4-202ENST00000366857 NPHP3Q7Z494 1330 aa12.13□□□□□ -0.47
CNIH4-202ENST00000366857 NGDNQ8NEJ9 315 aaKnown RBP12.13□□□□□ -0.47
CNIH4-202ENST00000366857 HDAC1Q13547 482 aaPredicted RBP12.13□□□□□ -0.47
CNIH4-202ENST00000366857 MVPQ14764 893 aaKnown RBP12.12□□□□□ -0.47
CNIH4-202ENST00000366857 INTS3Q68E01 1043 aaKnown RBP12.12□□□□□ -0.47
CNIH4-202ENST00000366857 BTAF1O14981 1849 aa12.12□□□□□ -0.47
CNIH4-202ENST00000366857 EP400Q96L91 3159 aa12.12□□□□□ -0.47
CNIH4-202ENST00000366857 SLAIN2Q9P270 581 aa12.12□□□□□ -0.47
CNIH4-202ENST00000366857 QSER1Q2KHR3 1735 aa12.11□□□□□ -0.47
CNIH4-202ENST00000366857 DCTN1Q14203 1278 aa12.11□□□□□ -0.47
CNIH4-202ENST00000366857 SALL2Q9Y467 1007 aaPredicted RBP12.11□□□□□ -0.47
CNIH4-202ENST00000366857 GNAI1P63096 354 aa12.11□□□□□ -0.47
CNIH4-202ENST00000366857 PDIA6Q15084 440 aa12.11□□□□□ -0.47
CNIH4-202ENST00000366857 COL15A1P39059 1388 aa12.1□□□□□ -0.47
CNIH4-202ENST00000366857 BCL9O00512 1426 aa12.1□□□□□ -0.47
CNIH4-202ENST00000366857 ATF7IPQ6VMQ6 1270 aa12.1□□□□□ -0.47
CNIH4-202ENST00000366857 SPEF2Q9C093 1822 aa12.1□□□□□ -0.47
CNIH4-202ENST00000366857 SALL3Q9BXA9 1300 aa12.1□□□□□ -0.47
CNIH4-202ENST00000366857 KIAA1551Q9HCM1 1747 aa12.09□□□□□ -0.47
CNIH4-202ENST00000366857 U2SURPO15042 1029 aaKnown RBP12.09□□□□□ -0.47
CNIH4-202ENST00000366857 C8orf34Q49A92 452 aa12.09□□□□□ -0.47
CNIH4-202ENST00000366857 MCM10Q7L590 875 aa12.09□□□□□ -0.47
CNIH4-202ENST00000366857 BCL9LQ86UU0 1499 aa12.08□□□□□ -0.48
CNIH4-202ENST00000366857 DOCK2Q92608 1830 aa12.08□□□□□ -0.48
CNIH4-202ENST00000366857 NOB1Q9ULX3 412 aaKnown RBP12.08□□□□□ -0.48
CNIH4-202ENST00000366857 KRT24Q2M2I5 525 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms