RNA–Protein interactions for RNA: ENST00000366739.5

MRPL55-212, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 3 BASIC

Gene MRPL55, Length 641 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-212ENST00000366739 COL24A1Q17RW2 1714 aa16.21■□□□□ 0.19
MRPL55-212ENST00000366739 TUBGCP6Q96RT7 1819 aa16.21■□□□□ 0.19
MRPL55-212ENST00000366739 GOLGB1Q14789 3259 aaKnown RBP16.21■□□□□ 0.19
MRPL55-212ENST00000366739 FAM208AQ9UK61 1670 aaKnown RBP16.21■□□□□ 0.18
MRPL55-212ENST00000366739 DOT1LQ8TEK3 1739 aa16.2■□□□□ 0.18
MRPL55-212ENST00000366739 MEGF6O75095 1541 aa16.19■□□□□ 0.18
MRPL55-212ENST00000366739 GIGYF1O75420 1035 aaPredicted RBP16.19■□□□□ 0.18
MRPL55-212ENST00000366739 HOXC9P31274 260 aa16.19■□□□□ 0.18
MRPL55-212ENST00000366739 ZCRB1Q8TBF4 217 aaKnown RBP16.19■□□□□ 0.18
MRPL55-212ENST00000366739 AMPHP49418 695 aa16.18■□□□□ 0.18
MRPL55-212ENST00000366739 COG3Q96JB2 828 aa16.18■□□□□ 0.18
MRPL55-212ENST00000366739 PUS7Q96PZ0 661 aaKnown RBP16.18■□□□□ 0.18
MRPL55-212ENST00000366739 CCNL1Q9UK58 526 aaPredicted RBP16.18■□□□□ 0.18
MRPL55-212ENST00000366739 LY75O60449 1722 aa16.18■□□□□ 0.18
MRPL55-212ENST00000366739 SHANK3Q9BYB0 1731 aa16.17■□□□□ 0.18
MRPL55-212ENST00000366739 YBX3P16989 372 aaKnown RBP eCLIP16.17■□□□□ 0.182e-6■□□□□ 10.7
MRPL55-212ENST00000366739 MSH5O43196 834 aa16.16■□□□□ 0.18
MRPL55-212ENST00000366739 COL23A1Q86Y22 540 aaPredicted RBP16.16■□□□□ 0.18
MRPL55-212ENST00000366739 RGPD2P0DJD1 1756 aa16.15■□□□□ 0.18
MRPL55-212ENST00000366739 MSL1Q68DK7 614 aa16.15■□□□□ 0.18
MRPL55-212ENST00000366739 TESK2Q96S53 571 aa16.15■□□□□ 0.18
MRPL55-212ENST00000366739 USP47Q96K76 1375 aa16.14■□□□□ 0.17
MRPL55-212ENST00000366739 RRS1Q15050 365 aaKnown RBP16.14■□□□□ 0.17
MRPL55-212ENST00000366739 NBPF6Q5VWK0 638 aa16.14■□□□□ 0.17
MRPL55-212ENST00000366739 USHBP1Q8N6Y0 703 aa16.14■□□□□ 0.17
MRPL55-212ENST00000366739 NBPF4Q96M43 638 aa16.14■□□□□ 0.17
MRPL55-212ENST00000366739 RTL1A6NKG5 1358 aa16.13■□□□□ 0.17
MRPL55-212ENST00000366739 ST20-MTHFSA0A0A6YYL1 179 aa16.12■□□□□ 0.17
MRPL55-212ENST00000366739 GRIN3BO60391 1043 aa16.12■□□□□ 0.17
MRPL55-212ENST00000366739 TONSLQ96HA7 1378 aa16.12■□□□□ 0.17
MRPL55-212ENST00000366739 RAPGEF4Q8WZA2 1011 aa16.1■□□□□ 0.17
MRPL55-212ENST00000366739 GGNBP2Q9H3C7 697 aa16.1■□□□□ 0.17
MRPL55-212ENST00000366739 CGNL1Q0VF96 1302 aa16.1■□□□□ 0.17
MRPL55-212ENST00000366739 CEP350Q5VT06 3117 aa16.09■□□□□ 0.17
MRPL55-212ENST00000366739 ATP10DQ9P241 1426 aa16.09■□□□□ 0.17
MRPL55-212ENST00000366739 FYB1O15117 783 aa16.08■□□□□ 0.16
MRPL55-212ENST00000366739 TATP17735 454 aaPredicted RBP16.08■□□□□ 0.16
MRPL55-212ENST00000366739 PALLDQ8WX93 1383 aa16.08■□□□□ 0.16
MRPL55-212ENST00000366739 SMG6Q86US8 1419 aaKnown RBP16.08■□□□□ 0.16
MRPL55-212ENST00000366739 C5P01031 1676 aa16.08■□□□□ 0.16
MRPL55-212ENST00000366739 HSP90AB2PQ58FF8 381 aa16.07■□□□□ 0.16
MRPL55-212ENST00000366739 CD2APQ9Y5K6 639 aa16.07■□□□□ 0.16
MRPL55-212ENST00000366739 PCDH11XQ9BZA7 1347 aa16.07■□□□□ 0.16
MRPL55-212ENST00000366739 PCDH11YQ9BZA8 1340 aa16.07■□□□□ 0.16
MRPL55-212ENST00000366739 MPRIPQ6WCQ1 1025 aa16.06■□□□□ 0.16
MRPL55-212ENST00000366739 INSRP06213 1382 aa16.05■□□□□ 0.16
MRPL55-212ENST00000366739 CYP27B1O15528 508 aa16.05■□□□□ 0.16
MRPL55-212ENST00000366739 AMIGO3Q86WK7 504 aa16.05■□□□□ 0.16
MRPL55-212ENST00000366739 FLAD1Q8NFF5 587 aa16.05■□□□□ 0.16
MRPL55-212ENST00000366739 SMIM5Q71RC9 77 aa16.04■□□□□ 0.16
MRPL55-212ENST00000366739 SLC24A1O60721 1099 aa16.03■□□□□ 0.16
MRPL55-212ENST00000366739 IFFO2Q5TF58 517 aa16.03■□□□□ 0.16
MRPL55-212ENST00000366739 C4BP0C0L5 1744 aa16.02■□□□□ 0.16
MRPL55-212ENST00000366739 TOGARAM1Q9Y4F4 1720 aa16.02■□□□□ 0.16
MRPL55-212ENST00000366739 ADCY9O60503 1353 aa16.02■□□□□ 0.16
MRPL55-212ENST00000366739 FLT4P35916 1363 aa16.02■□□□□ 0.16
MRPL55-212ENST00000366739 PHF14O94880 888 aa16.02■□□□□ 0.16
MRPL55-212ENST00000366739 ZNF526Q8TF50 670 aaPredicted RBP16.02■□□□□ 0.16
MRPL55-212ENST00000366739 AK7Q96M32 723 aa16.02■□□□□ 0.16
MRPL55-212ENST00000366739 GPBP1L1Q9HC44 474 aaPredicted RBP16.02■□□□□ 0.16
MRPL55-212ENST00000366739 WWC3Q9ULE0 1092 aa16.02■□□□□ 0.16
MRPL55-212ENST00000366739 TAF1LQ8IZX4 1826 aa16.02■□□□□ 0.16
MRPL55-212ENST00000366739 SMARCC1Q92922 1105 aaPredicted RBP16.01■□□□□ 0.15
MRPL55-212ENST00000366739 IGSF1Q8N6C5 1336 aa16■□□□□ 0.15
MRPL55-212ENST00000366739 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16■□□□□ 0.15
MRPL55-212ENST00000366739 HMGB2P26583 209 aaKnown RBP16■□□□□ 0.15
MRPL55-212ENST00000366739 TMF1P82094 1093 aa16■□□□□ 0.15
MRPL55-212ENST00000366739 PIGBQ92521 554 aa16■□□□□ 0.15
MRPL55-212ENST00000366739 KIF24Q5T7B8 1368 aa16■□□□□ 0.15
MRPL55-212ENST00000366739 EMILIN1Q9Y6C2 1016 aa15.99■□□□□ 0.15
MRPL55-212ENST00000366739 LINC00116Q8NCU8 138 aa15.98■□□□□ 0.15
MRPL55-212ENST00000366739 ITGB4P16144 1822 aa15.98■□□□□ 0.15
MRPL55-212ENST00000366739 KIF20BQ96Q89 1820 aa15.98■□□□□ 0.15
MRPL55-212ENST00000366739 UBR3Q6ZT12 1888 aa15.97■□□□□ 0.15
MRPL55-212ENST00000366739 PKD1L3Q7Z443 1732 aa15.97■□□□□ 0.15
MRPL55-212ENST00000366739 NSD3Q9BZ95 1437 aa15.97■□□□□ 0.15
MRPL55-212ENST00000366739 LOC102724428A0A0B4J2F2 783 aa15.97■□□□□ 0.15
MRPL55-212ENST00000366739 SIK1P57059 783 aa15.97■□□□□ 0.15
MRPL55-212ENST00000366739 NKX1-1Q15270 411 aaPredicted RBP15.97■□□□□ 0.15
MRPL55-212ENST00000366739 NCAPD2Q15021 1401 aa15.96■□□□□ 0.15
MRPL55-212ENST00000366739 HSPA6P17066 643 aa15.96■□□□□ 0.15
MRPL55-212ENST00000366739 SSFA2P28290 1259 aa15.96■□□□□ 0.15
MRPL55-212ENST00000366739 CARD14Q9BXL6 1004 aa15.96■□□□□ 0.15
MRPL55-212ENST00000366739 PPM1GO15355 546 aaPredicted RBP15.95■□□□□ 0.14
MRPL55-212ENST00000366739 ITPK1Q13572 414 aa15.95■□□□□ 0.14
MRPL55-212ENST00000366739 SPG7Q9UQ90 795 aa15.95■□□□□ 0.14
MRPL55-212ENST00000366739 MAP2P11137 1827 aaKnown RBP15.95■□□□□ 0.14
MRPL55-212ENST00000366739 GNPATO15228 680 aa15.94■□□□□ 0.14
MRPL55-212ENST00000366739 ASAP1Q9ULH1 1129 aa15.94■□□□□ 0.14
MRPL55-212ENST00000366739 TMOD3Q9NYL9 352 aa15.93■□□□□ 0.14
MRPL55-212ENST00000366739 CDCA8Q53HL2 280 aa15.92■□□□□ 0.14
MRPL55-212ENST00000366739 EYA1Q99502 592 aa15.92■□□□□ 0.14
MRPL55-212ENST00000366739 KIF3CO14782 793 aa15.91■□□□□ 0.14
MRPL55-212ENST00000366739 MMP10P09238 476 aa15.91■□□□□ 0.14
MRPL55-212ENST00000366739 ATP6V1AP38606 617 aa15.91■□□□□ 0.14
MRPL55-212ENST00000366739 WASHC2AQ641Q2 1341 aa15.91■□□□□ 0.14
MRPL55-212ENST00000366739 PHKG2P15735 406 aa15.9■□□□□ 0.14
MRPL55-212ENST00000366739 ATG3Q9NT62 314 aa15.9■□□□□ 0.14
MRPL55-212ENST00000366739 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.9■□□□□ 0.14
MRPL55-212ENST00000366739 PXDNLA1KZ92 1463 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 116.6 ms