RNA–Protein interactions for RNA: ENST00000366286.6

YBX3-203, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-203ENST00000366286 LY75O60449 1722 aa14.24□□□□□ -0.13
YBX3-203ENST00000366286 PAPPAQ13219 1627 aa14.24□□□□□ -0.13
YBX3-203ENST00000366286 TNNT2P45379 298 aaPredicted RBP14.24□□□□□ -0.13
YBX3-203ENST00000366286 R3HDM1Q15032 1099 aaKnown RBP14.24□□□□□ -0.13
YBX3-203ENST00000366286 ACSBG1Q96GR2 724 aa14.24□□□□□ -0.13
YBX3-203ENST00000366286 ITGB4P16144 1822 aa14.24□□□□□ -0.13
YBX3-203ENST00000366286 CASZ1Q86V15 1759 aa14.24□□□□□ -0.13
YBX3-203ENST00000366286 PLSCR1O15162 318 aa14.23□□□□□ -0.13
YBX3-203ENST00000366286 KCNQ2O43526 872 aa14.23□□□□□ -0.13
YBX3-203ENST00000366286 DDX54Q8TDD1 881 aaKnown RBP14.23□□□□□ -0.13
YBX3-203ENST00000366286 POLKQ9UBT6 870 aa14.23□□□□□ -0.13
YBX3-203ENST00000366286 WASHC2AQ641Q2 1341 aa14.22□□□□□ -0.13
YBX3-203ENST00000366286 TUBGCP6Q96RT7 1819 aa14.21□□□□□ -0.13
YBX3-203ENST00000366286 ZCRB1Q8TBF4 217 aaKnown RBP14.21□□□□□ -0.13
YBX3-203ENST00000366286 RAPGEF4Q8WZA2 1011 aa14.21□□□□□ -0.13
YBX3-203ENST00000366286 KNSTRNQ9Y448 316 aa14.21□□□□□ -0.13
YBX3-203ENST00000366286 SRCAPQ6ZRS2 3230 aa14.2□□□□□ -0.14
YBX3-203ENST00000366286 TATP17735 454 aaPredicted RBP14.2□□□□□ -0.14
YBX3-203ENST00000366286 QSER1Q2KHR3 1735 aa14.19□□□□□ -0.14
YBX3-203ENST00000366286 AMER1Q5JTC6 1135 aaPredicted RBP14.19□□□□□ -0.14
YBX3-203ENST00000366286 NBPF14Q5TI25 921 aa14.19□□□□□ -0.14
YBX3-203ENST00000366286 MORC1Q86VD1 984 aa14.19□□□□□ -0.14
YBX3-203ENST00000366286 PCDH11XQ9BZA7 1347 aa14.18□□□□□ -0.14
YBX3-203ENST00000366286 PCDH11YQ9BZA8 1340 aa14.18□□□□□ -0.14
YBX3-203ENST00000366286 EIF4A2Q14240 407 aaKnown RBP14.18□□□□□ -0.14
YBX3-203ENST00000366286 PROM2Q8N271 834 aa14.18□□□□□ -0.14
YBX3-203ENST00000366286 EYA1Q99502 592 aa14.18□□□□□ -0.14
YBX3-203ENST00000366286 ANO8Q9HCE9 1232 aaPredicted RBP14.18□□□□□ -0.14
YBX3-203ENST00000366286 TXNRD1Q16881 649 aa14.17□□□□□ -0.14
YBX3-203ENST00000366286 VIRMAQ69YN4 1812 aaKnown RBP14.17□□□□□ -0.14
YBX3-203ENST00000366286 TAF1LQ8IZX4 1826 aa14.17□□□□□ -0.14
YBX3-203ENST00000366286 C5P01031 1676 aa14.16□□□□□ -0.14
YBX3-203ENST00000366286 SYTL4Q96C24 671 aaPredicted RBP14.15□□□□□ -0.14
YBX3-203ENST00000366286 IGSF1Q8N6C5 1336 aa14.15□□□□□ -0.15
YBX3-203ENST00000366286 PER1O15534 1290 aaPredicted RBP14.14□□□□□ -0.15
YBX3-203ENST00000366286 PRIM1P49642 420 aaKnown RBP14.14□□□□□ -0.15
YBX3-203ENST00000366286 CYP27B1O15528 508 aa14.13□□□□□ -0.15
YBX3-203ENST00000366286 PLEKHG2Q9H7P9 1386 aa14.12□□□□□ -0.15
YBX3-203ENST00000366286 NPC1L1Q9UHC9 1359 aa14.12□□□□□ -0.15
YBX3-203ENST00000366286 CC2D1BQ5T0F9 858 aaKnown RBP14.12□□□□□ -0.15
YBX3-203ENST00000366286 STK32BQ9NY57 414 aa14.11□□□□□ -0.15
YBX3-203ENST00000366286 SPG7Q9UQ90 795 aa14.11□□□□□ -0.15
YBX3-203ENST00000366286 SCN11AQ9UI33 1791 aa14.1□□□□□ -0.15
YBX3-203ENST00000366286 LRRC4BQ9NT99 713 aa14.1□□□□□ -0.15
YBX3-203ENST00000366286 SLC15A2Q16348 729 aa14.09□□□□□ -0.15
YBX3-203ENST00000366286 PDGFDQ9GZP0 370 aaPredicted RBP14.09□□□□□ -0.15
YBX3-203ENST00000366286 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.09□□□□□ -0.15
YBX3-203ENST00000366286 COL3A1P02461 1466 aaPredicted RBP14.09□□□□□ -0.15
YBX3-203ENST00000366286 COL24A1Q17RW2 1714 aa14.08□□□□□ -0.16
YBX3-203ENST00000366286 MTHFSP49914 203 aa14.08□□□□□ -0.16
YBX3-203ENST00000366286 CNGB1Q14028 1251 aaPredicted RBP14.08□□□□□ -0.16
YBX3-203ENST00000366286 NKX1-1Q15270 411 aaPredicted RBP14.08□□□□□ -0.16
YBX3-203ENST00000366286 ZNF827Q17R98 1081 aa14.08□□□□□ -0.16
YBX3-203ENST00000366286 SLC27A3Q5K4L6 730 aa14.08□□□□□ -0.16
YBX3-203ENST00000366286 AEBP1Q8IUX7 1158 aa14.08□□□□□ -0.16
YBX3-203ENST00000366286 KDRP35968 1356 aa14.08□□□□□ -0.16
YBX3-203ENST00000366286 C4BP0C0L5 1744 aa14.07□□□□□ -0.16
YBX3-203ENST00000366286 PHKG2P15735 406 aa14.07□□□□□ -0.16
YBX3-203ENST00000366286 IL13P35225 146 aa14.07□□□□□ -0.16
YBX3-203ENST00000366286 KCNQ4P56696 695 aa14.07□□□□□ -0.16
YBX3-203ENST00000366286 PALLDQ8WX93 1383 aa14.07□□□□□ -0.16
YBX3-203ENST00000366286 UBR3Q6ZT12 1888 aa14.06□□□□□ -0.16
YBX3-203ENST00000366286 MPRIPQ6WCQ1 1025 aa14.06□□□□□ -0.16
YBX3-203ENST00000366286 IFNL2Q8IZJ0 200 aa14.06□□□□□ -0.16
YBX3-203ENST00000366286 SPON1Q9HCB6 807 aa14.06□□□□□ -0.16
YBX3-203ENST00000366286 ZNF831Q5JPB2 1677 aa14.05□□□□□ -0.16
YBX3-203ENST00000366286 SULT6B1Q6IMI4 303 aa14.05□□□□□ -0.16
YBX3-203ENST00000366286 AKT1S1Q96B36 256 aa14.05□□□□□ -0.16
YBX3-203ENST00000366286 CCNL1Q9UK58 526 aaPredicted RBP14.05□□□□□ -0.16
YBX3-203ENST00000366286 KDM6AO15550 1401 aaPredicted RBP14.05□□□□□ -0.16
YBX3-203ENST00000366286 COL5A3P25940 1745 aaPredicted RBP14.04□□□□□ -0.16
YBX3-203ENST00000366286 ZBTB7AO95365 584 aa14.04□□□□□ -0.16
YBX3-203ENST00000366286 ZNF530Q6P9A1 599 aaPredicted RBP14.04□□□□□ -0.16
YBX3-203ENST00000366286 PLEKHO1Q53GL0 409 aaPredicted RBP14.03□□□□□ -0.16
YBX3-203ENST00000366286 PIGBQ92521 554 aa14.03□□□□□ -0.16
YBX3-203ENST00000366286 ADAMTS7Q9UKP4 1686 aa14.03□□□□□ -0.16
YBX3-203ENST00000366286 AMOTQ4VCS5 1084 aa14.02□□□□□ -0.17
YBX3-203ENST00000366286 TMOD3Q9NYL9 352 aa14.02□□□□□ -0.17
YBX3-203ENST00000366286 PNPLA7Q6ZV29 1317 aa14.01□□□□□ -0.17
YBX3-203ENST00000366286 DIAPH1O60610 1272 aaKnown RBP14.01□□□□□ -0.17
YBX3-203ENST00000366286 SMARCC1Q92922 1105 aaPredicted RBP14.01□□□□□ -0.17
YBX3-203ENST00000366286 PPP1R1BQ9UD71 204 aaPredicted RBP14.01□□□□□ -0.17
YBX3-203ENST00000366286 CICQ96RK0 1608 aaPredicted RBP14.01□□□□□ -0.17
YBX3-203ENST00000366286 HSP90AB1P08238 724 aaKnown RBP14□□□□□ -0.17
YBX3-203ENST00000366286 HMOX1P09601 288 aa14□□□□□ -0.17
YBX3-203ENST00000366286 MTFR1LQ9H019 292 aa14□□□□□ -0.17
YBX3-203ENST00000366286 TFCP2L1Q9NZI6 479 aa14□□□□□ -0.17
YBX3-203ENST00000366286 ATF5Q9Y2D1 282 aaPredicted RBP14□□□□□ -0.17
YBX3-203ENST00000366286 TJP1Q07157 1748 aa14□□□□□ -0.17
YBX3-203ENST00000366286 MRC1P22897 1456 aa13.99□□□□□ -0.17
YBX3-203ENST00000366286 SIPA1L3O60292 1781 aaPredicted RBP13.99□□□□□ -0.17
YBX3-203ENST00000366286 PTGER2P43116 358 aa13.99□□□□□ -0.17
YBX3-203ENST00000366286 C1orf141Q5JVX7 400 aa13.99□□□□□ -0.17
YBX3-203ENST00000366286 DCAF5Q96JK2 942 aa13.99□□□□□ -0.17
YBX3-203ENST00000366286 ASAP1Q9ULH1 1129 aa13.99□□□□□ -0.17
YBX3-203ENST00000366286 UBR2Q8IWV8 1755 aa13.97□□□□□ -0.17
YBX3-203ENST00000366286 LOC102724428A0A0B4J2F2 783 aa13.97□□□□□ -0.17
YBX3-203ENST00000366286 ERVV-2B6SEH9 535 aa13.97□□□□□ -0.17
YBX3-203ENST00000366286 SIK1P57059 783 aa13.97□□□□□ -0.17
YBX3-203ENST00000366286 SGIP1Q9BQI5 828 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms