RNA–Protein interactions for RNA: ENST00000364047.1

RNU6-553P-201, Transcript of RNA, U6 small nuclear 553, pseudogene, humanhuman

BASIC

Gene RNU6-553P, Length 96 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-553P-201ENST00000364047 CYP2U1Q7Z449 544 aa8.73□□□□□ -1.01
RNU6-553P-201ENST00000364047 FIGNL2A6NMB9 653 aa8.72□□□□□ -1.01
RNU6-553P-201ENST00000364047 OXLD1Q5BKU9 147 aa8.72□□□□□ -1.01
RNU6-553P-201ENST00000364047 OSBPL3Q9H4L5 887 aa8.72□□□□□ -1.01
RNU6-553P-201ENST00000364047 PIK3CDO00329 1044 aa8.71□□□□□ -1.02
RNU6-553P-201ENST00000364047 TRAK2O60296 914 aa8.71□□□□□ -1.02
RNU6-553P-201ENST00000364047 FNBP4Q8N3X1 1017 aaPredicted RBP8.71□□□□□ -1.02
RNU6-553P-201ENST00000364047 PLPP7Q8NBV4 271 aa8.71□□□□□ -1.02
RNU6-553P-201ENST00000364047 A6NJR5 290 aa8.7□□□□□ -1.02
RNU6-553P-201ENST00000364047 MEN1O00255 615 aa8.7□□□□□ -1.02
RNU6-553P-201ENST00000364047 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.7□□□□□ -1.02
RNU6-553P-201ENST00000364047 MAP7D1Q3KQU3 841 aa8.7□□□□□ -1.02
RNU6-553P-201ENST00000364047 ADAMTS19Q8TE59 1207 aa8.7□□□□□ -1.02
RNU6-553P-201ENST00000364047 CHIC2Q9UKJ5 165 aa8.7□□□□□ -1.02
RNU6-553P-201ENST00000364047 A0A1W2PRU2 124 aa8.69□□□□□ -1.02
RNU6-553P-201ENST00000364047 TERTO14746 1132 aaKnown RBP8.69□□□□□ -1.02
RNU6-553P-201ENST00000364047 USP4Q13107 963 aa8.69□□□□□ -1.02
RNU6-553P-201ENST00000364047 HDGFL1Q5TGJ6 251 aa8.69□□□□□ -1.02
RNU6-553P-201ENST00000364047 RNF217Q8TC41 542 aa8.69□□□□□ -1.02
RNU6-553P-201ENST00000364047 ARHGEF10LQ9HCE6 1279 aa8.69□□□□□ -1.02
RNU6-553P-201ENST00000364047 NXF1Q9UBU9 619 aaKnown RBP8.69□□□□□ -1.02
RNU6-553P-201ENST00000364047 SKIP12755 728 aa8.68□□□□□ -1.02
RNU6-553P-201ENST00000364047 FOXD4L5Q5VV16 416 aaPredicted RBP8.68□□□□□ -1.02
RNU6-553P-201ENST00000364047 SIRT1Q96EB6 747 aa8.68□□□□□ -1.02
RNU6-553P-201ENST00000364047 RAB6BQ9NRW1 208 aa8.68□□□□□ -1.02
RNU6-553P-201ENST00000364047 TREML4Q6UXN2 200 aa8.67□□□□□ -1.02
RNU6-553P-201ENST00000364047 NLRP3Q96P20 1036 aa8.67□□□□□ -1.02
RNU6-553P-201ENST00000364047 WFS1O76024 890 aa8.66□□□□□ -1.02
RNU6-553P-201ENST00000364047 GNRH1P01148 92 aa8.66□□□□□ -1.02
RNU6-553P-201ENST00000364047 VEGFBP49765 207 aa8.66□□□□□ -1.02
RNU6-553P-201ENST00000364047 NFX1Q12986 1120 aaKnown RBP8.66□□□□□ -1.02
RNU6-553P-201ENST00000364047 CLN3Q13286 438 aa8.66□□□□□ -1.02
RNU6-553P-201ENST00000364047 NFATC2IPQ8NCF5 419 aa8.66□□□□□ -1.02
RNU6-553P-201ENST00000364047 GLMNQ92990 594 aa8.66□□□□□ -1.02
RNU6-553P-201ENST00000364047 RNF144AP50876 292 aaPredicted RBP8.65□□□□□ -1.02
RNU6-553P-201ENST00000364047 LYSMD3Q7Z3D4 306 aa8.65□□□□□ -1.02
RNU6-553P-201ENST00000364047 GTF3C3Q9Y5Q9 886 aa8.65□□□□□ -1.02
RNU6-553P-201ENST00000364047 GPC1P35052 558 aa8.64□□□□□ -1.03
RNU6-553P-201ENST00000364047 PTSQ03393 145 aa8.64□□□□□ -1.03
RNU6-553P-201ENST00000364047 EML3Q32P44 896 aa8.64□□□□□ -1.03
RNU6-553P-201ENST00000364047 NPAS3Q8IXF0 933 aa8.64□□□□□ -1.03
RNU6-553P-201ENST00000364047 SLC16A10Q8TF71 515 aa8.64□□□□□ -1.03
RNU6-553P-201ENST00000364047 UCN2Q96RP3 112 aa8.64□□□□□ -1.03
RNU6-553P-201ENST00000364047 USP17L5A8MUK1 530 aa8.63□□□□□ -1.03
RNU6-553P-201ENST00000364047 H3BM21 787 aa8.63□□□□□ -1.03
RNU6-553P-201ENST00000364047 SLC27A3Q5K4L6 730 aa8.63□□□□□ -1.03
RNU6-553P-201ENST00000364047 PRICKLE2Q7Z3G6 844 aa8.63□□□□□ -1.03
RNU6-553P-201ENST00000364047 DEPDC4Q8N2C3 294 aa8.63□□□□□ -1.03
RNU6-553P-201ENST00000364047 CNKSR1Q969H4 720 aa8.63□□□□□ -1.03
RNU6-553P-201ENST00000364047 STAU1O95793 577 aaKnown RBP8.62□□□□□ -1.03
RNU6-553P-201ENST00000364047 IL2RAP01589 272 aa8.62□□□□□ -1.03
RNU6-553P-201ENST00000364047 NCOA4Q13772 614 aa8.62□□□□□ -1.03
RNU6-553P-201ENST00000364047 ESCO1Q5FWF5 840 aa8.62□□□□□ -1.03
RNU6-553P-201ENST00000364047 TBC1D9Q6ZT07 1266 aa8.62□□□□□ -1.03
RNU6-553P-201ENST00000364047 CALR3Q96L12 384 aaKnown RBP8.62□□□□□ -1.03
RNU6-553P-201ENST00000364047 ESYT1Q9BSJ8 1104 aa8.62□□□□□ -1.03
RNU6-553P-201ENST00000364047 PPFIA3O75145 1194 aa8.61□□□□□ -1.03
RNU6-553P-201ENST00000364047 LCE2AQ5TA79 106 aaPredicted RBP8.61□□□□□ -1.03
RNU6-553P-201ENST00000364047 ETNK1Q9HBU6 452 aa8.61□□□□□ -1.03
RNU6-553P-201ENST00000364047 NOD1Q9Y239 953 aa8.61□□□□□ -1.03
RNU6-553P-201ENST00000364047 ATP9BO43861 1147 aa8.6□□□□□ -1.03
RNU6-553P-201ENST00000364047 LZTS3O60299 673 aaPredicted RBP8.6□□□□□ -1.03
RNU6-553P-201ENST00000364047 RHOQP17081 205 aa8.6□□□□□ -1.03
RNU6-553P-201ENST00000364047 CCDC155Q8N6L0 562 aa8.6□□□□□ -1.03
RNU6-553P-201ENST00000364047 XAGE2Q96GT9 111 aa8.6□□□□□ -1.03
RNU6-553P-201ENST00000364047 GRIP2Q9C0E4 1043 aa8.6□□□□□ -1.03
RNU6-553P-201ENST00000364047 USP17L3A6NCW0 530 aa8.59□□□□□ -1.03
RNU6-553P-201ENST00000364047 USP17L4A6NCW7 530 aa8.59□□□□□ -1.03
RNU6-553P-201ENST00000364047 GDF10P55107 478 aa8.59□□□□□ -1.03
RNU6-553P-201ENST00000364047 CENPCQ03188 943 aa8.59□□□□□ -1.03
RNU6-553P-201ENST00000364047 USP17L2Q6R6M4 530 aa8.59□□□□□ -1.03
RNU6-553P-201ENST00000364047 USP17L1Q7RTZ2 530 aa8.59□□□□□ -1.03
RNU6-553P-201ENST00000364047 IRF7Q92985 503 aa8.59□□□□□ -1.03
RNU6-553P-201ENST00000364047 ZNF777Q9ULD5 760 aaPredicted RBP8.59□□□□□ -1.03
RNU6-553P-201ENST00000364047 SLC35F4A4IF30 521 aa8.58□□□□□ -1.04
RNU6-553P-201ENST00000364047 SCNN1DP51172 638 aa8.58□□□□□ -1.04
RNU6-553P-201ENST00000364047 GTF2IP78347 998 aa8.58□□□□□ -1.04
RNU6-553P-201ENST00000364047 PSME1Q06323 249 aa8.58□□□□□ -1.04
RNU6-553P-201ENST00000364047 POU4F2Q12837 409 aa8.58□□□□□ -1.04
RNU6-553P-201ENST00000364047 LCE2CQ5TA81 110 aa8.58□□□□□ -1.04
RNU6-553P-201ENST00000364047 PLEKHM2Q8IWE5 1019 aa8.58□□□□□ -1.04
RNU6-553P-201ENST00000364047 PCDHGA11Q9Y5H2 935 aa8.58□□□□□ -1.04
RNU6-553P-201ENST00000364047 ERBB4Q15303 1308 aa8.57□□□□□ -1.04
RNU6-553P-201ENST00000364047 SENP3-EIF4A1A0A087X0R7 540 aa8.57□□□□□ -1.04
RNU6-553P-201ENST00000364047 INHAP05111 366 aa8.57□□□□□ -1.04
RNU6-553P-201ENST00000364047 ZSCAN10Q96SZ4 725 aaPredicted RBP8.57□□□□□ -1.04
RNU6-553P-201ENST00000364047 TFIP11Q9UBB9 837 aaKnown RBP8.57□□□□□ -1.04
RNU6-553P-201ENST00000364047 HRH3Q9Y5N1 445 aa8.57□□□□□ -1.04
RNU6-553P-201ENST00000364047 SPATA31C2B4DYI2 1134 aa8.56□□□□□ -1.04
RNU6-553P-201ENST00000364047 GTF2E1P29083 439 aaPredicted RBP8.56□□□□□ -1.04
RNU6-553P-201ENST00000364047 TLR1Q15399 786 aa8.56□□□□□ -1.04
RNU6-553P-201ENST00000364047 NBPF10Q6P3W6 841 aaKnown RBP8.56□□□□□ -1.04
RNU6-553P-201ENST00000364047 TRIM50Q86XT4 487 aa8.56□□□□□ -1.04
RNU6-553P-201ENST00000364047 NBPF15Q8N660 670 aa8.56□□□□□ -1.04
RNU6-553P-201ENST00000364047 FHDC1Q9C0D6 1143 aaPredicted RBP8.56□□□□□ -1.04
RNU6-553P-201ENST00000364047 ZMYND15Q9H091 742 aa8.56□□□□□ -1.04
RNU6-553P-201ENST00000364047 PALM3A6NDB9 673 aaPredicted RBP8.55□□□□□ -1.04
RNU6-553P-201ENST00000364047 WASLO00401 505 aaPredicted RBP8.55□□□□□ -1.04
RNU6-553P-201ENST00000364047 ITGA6P23229 1130 aa8.55□□□□□ -1.04
RNU6-553P-201ENST00000364047 TMEM214Q6NUQ4 689 aaKnown RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms