RNA–Protein interactions for RNA: ENST00000363574.1

RNU6-1339P-201, Transcript of RNA, U6 small nuclear 1339, pseudogene, humanhuman

BASIC

Gene RNU6-1339P, Length 91 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1339P-201ENST00000363574 USP4Q13107 963 aa7.65□□□□□ -1.18
RNU6-1339P-201ENST00000363574 SEPT12Q8IYM1 358 aa7.65□□□□□ -1.18
RNU6-1339P-201ENST00000363574 SIRT1Q96EB6 747 aa7.65□□□□□ -1.18
RNU6-1339P-201ENST00000363574 RBM19Q9Y4C8 960 aaKnown RBP7.65□□□□□ -1.18
RNU6-1339P-201ENST00000363574 RBM47A0AV96 593 aaKnown RBP7.64□□□□□ -1.19
RNU6-1339P-201ENST00000363574 UNCXA6NJT0 531 aa7.64□□□□□ -1.19
RNU6-1339P-201ENST00000363574 ERCC3P19447 782 aa7.64□□□□□ -1.19
RNU6-1339P-201ENST00000363574 PSME1Q06323 249 aa7.64□□□□□ -1.19
RNU6-1339P-201ENST00000363574 CCDC125Q86Z20 511 aa7.64□□□□□ -1.19
RNU6-1339P-201ENST00000363574 CDV3Q9UKY7 258 aaKnown RBP7.64□□□□□ -1.19
RNU6-1339P-201ENST00000363574 EGFL7Q9UHF1 273 aa7.63□□□□□ -1.19
RNU6-1339P-201ENST00000363574 LGR5O75473 907 aa7.62□□□□□ -1.19
RNU6-1339P-201ENST00000363574 BIN2Q9UBW5 565 aaPredicted RBP7.62□□□□□ -1.19
RNU6-1339P-201ENST00000363574 MARSP56192 900 aaKnown RBP7.61□□□□□ -1.19
RNU6-1339P-201ENST00000363574 KCTD15Q96SI1 283 aaPredicted RBP7.61□□□□□ -1.19
RNU6-1339P-201ENST00000363574 HINFPQ9BQA5 517 aa7.61□□□□□ -1.19
RNU6-1339P-201ENST00000363574 M0R2N6 131 aa7.6□□□□□ -1.19
RNU6-1339P-201ENST00000363574 PPEF1O14829 653 aaPredicted RBP7.6□□□□□ -1.19
RNU6-1339P-201ENST00000363574 ABL1P00519 1130 aa7.6□□□□□ -1.19
RNU6-1339P-201ENST00000363574 WEE1P30291 646 aa7.6□□□□□ -1.19
RNU6-1339P-201ENST00000363574 RAB15P59190 212 aa7.6□□□□□ -1.19
RNU6-1339P-201ENST00000363574 ZNF211Q13398 564 aaPredicted RBP7.6□□□□□ -1.19
RNU6-1339P-201ENST00000363574 TSEN2Q8NCE0 465 aaKnown RBP7.6□□□□□ -1.19
RNU6-1339P-201ENST00000363574 H3BRB1 525 aa7.59□□□□□ -1.19
RNU6-1339P-201ENST00000363574 ICMTO60725 284 aa7.59□□□□□ -1.19
RNU6-1339P-201ENST00000363574 SCTRP47872 440 aa7.59□□□□□ -1.19
RNU6-1339P-201ENST00000363574 INTS6LQ5JSJ4 861 aaKnown RBP7.59□□□□□ -1.19
RNU6-1339P-201ENST00000363574 TUT1Q9H6E5 874 aaKnown RBP7.59□□□□□ -1.19
RNU6-1339P-201ENST00000363574 ANO2Q9NQ90 1003 aa7.59□□□□□ -1.19
RNU6-1339P-201ENST00000363574 SEPT3Q9UH03 358 aa7.59□□□□□ -1.19
RNU6-1339P-201ENST00000363574 ERVH48-1M5A8F1 160 aa7.58□□□□□ -1.2
RNU6-1339P-201ENST00000363574 MYCP01106 439 aaPredicted RBP7.58□□□□□ -1.2
RNU6-1339P-201ENST00000363574 TRIM32Q13049 653 aa7.58□□□□□ -1.2
RNU6-1339P-201ENST00000363574 FKBP5Q13451 457 aaPredicted RBP7.58□□□□□ -1.2
RNU6-1339P-201ENST00000363574 SERBP1Q8NC51 408 aaKnown RBP eCLIP7.58□□□□□ -1.2
RNU6-1339P-201ENST00000363574 MAP4K5Q9Y4K4 846 aa7.58□□□□□ -1.2
RNU6-1339P-201ENST00000363574 VARSP26640 1264 aaKnown RBP7.57□□□□□ -1.2
RNU6-1339P-201ENST00000363574 SKOR1P84550 965 aa7.57□□□□□ -1.2
RNU6-1339P-201ENST00000363574 ECM1Q16610 540 aa7.57□□□□□ -1.2
RNU6-1339P-201ENST00000363574 PLA2G2CQ5R387 149 aa7.57□□□□□ -1.2
RNU6-1339P-201ENST00000363574 CAPN12Q6ZSI9 719 aa7.57□□□□□ -1.2
RNU6-1339P-201ENST00000363574 VASH1Q7L8A9 365 aaPredicted RBP7.57□□□□□ -1.2
RNU6-1339P-201ENST00000363574 NPAS4Q8IUM7 802 aa7.57□□□□□ -1.2
RNU6-1339P-201ENST00000363574 GTF3C2Q8WUA4 911 aaPredicted RBP7.57□□□□□ -1.2
RNU6-1339P-201ENST00000363574 PURBQ96QR8 312 aaKnown RBP7.57□□□□□ -1.2
RNU6-1339P-201ENST00000363574 MKNK1Q9BUB5 465 aa7.57□□□□□ -1.2
RNU6-1339P-201ENST00000363574 ZNF358Q9NW07 568 aa7.57□□□□□ -1.2
RNU6-1339P-201ENST00000363574 DNMT3AQ9Y6K1 912 aaPredicted RBP7.57□□□□□ -1.2
RNU6-1339P-201ENST00000363574 ANKRD33BA6NCL7 494 aa7.56□□□□□ -1.2
RNU6-1339P-201ENST00000363574 TMEM229AB2RXF0 380 aa7.56□□□□□ -1.2
RNU6-1339P-201ENST00000363574 ZBTB24O43167 697 aaPredicted RBP7.56□□□□□ -1.2
RNU6-1339P-201ENST00000363574 C21orf2O43822 256 aa7.56□□□□□ -1.2
RNU6-1339P-201ENST00000363574 ZNF16P17020 682 aaPredicted RBP7.56□□□□□ -1.2
RNU6-1339P-201ENST00000363574 ERVK-9P63128 1117 aa7.56□□□□□ -1.2
RNU6-1339P-201ENST00000363574 GLYCTKQ8IVS8 523 aa7.56□□□□□ -1.2
RNU6-1339P-201ENST00000363574 BCL2L13Q9BXK5 485 aa7.56□□□□□ -1.2
RNU6-1339P-201ENST00000363574 RNF223E7ERA6 249 aa7.55□□□□□ -1.2
RNU6-1339P-201ENST00000363574 SCNN1DP51172 638 aa7.55□□□□□ -1.2
RNU6-1339P-201ENST00000363574 WNT7BP56706 349 aa7.55□□□□□ -1.2
RNU6-1339P-201ENST00000363574 GAS2L2Q8NHY3 880 aa7.55□□□□□ -1.2
RNU6-1339P-201ENST00000363574 OSBPL3Q9H4L5 887 aa7.55□□□□□ -1.2
RNU6-1339P-201ENST00000363574 KIAA1522Q9P206 1035 aaPredicted RBP7.55□□□□□ -1.2
RNU6-1339P-201ENST00000363574 PTCD1O75127 700 aaKnown RBP7.54□□□□□ -1.2
RNU6-1339P-201ENST00000363574 IGFBP4P22692 258 aa7.54□□□□□ -1.2
RNU6-1339P-201ENST00000363574 FKBP4Q02790 459 aaKnown RBP eCLIP7.54□□□□□ -1.2
RNU6-1339P-201ENST00000363574 MTMR3Q13615 1198 aa7.54□□□□□ -1.2
RNU6-1339P-201ENST00000363574 CC2D2BQ6DHV5 1058 aa7.54□□□□□ -1.2
RNU6-1339P-201ENST00000363574 ANKLE1Q8NAG6 615 aa7.54□□□□□ -1.2
RNU6-1339P-201ENST00000363574 COL26A1Q96A83 441 aa7.54□□□□□ -1.2
RNU6-1339P-201ENST00000363574 MRRFQ96E11 262 aaKnown RBP7.54□□□□□ -1.2
RNU6-1339P-201ENST00000363574 IGSF5Q9NSI5 407 aa7.54□□□□□ -1.2
RNU6-1339P-201ENST00000363574 STAU1O95793 577 aaKnown RBP7.53□□□□□ -1.2
RNU6-1339P-201ENST00000363574 ARHGAP4P98171 946 aa7.53□□□□□ -1.2
RNU6-1339P-201ENST00000363574 SF3B2Q13435 895 aaKnown RBP7.53□□□□□ -1.2
RNU6-1339P-201ENST00000363574 GIPC2Q8TF65 315 aa7.53□□□□□ -1.2
RNU6-1339P-201ENST00000363574 CDK15Q96Q40 435 aa7.53□□□□□ -1.2
RNU6-1339P-201ENST00000363574 TMPRSS4Q9NRS4 437 aa7.53□□□□□ -1.2
RNU6-1339P-201ENST00000363574 WASLO00401 505 aaPredicted RBP7.52□□□□□ -1.21
RNU6-1339P-201ENST00000363574 FOXO3O43524 673 aa7.52□□□□□ -1.21
RNU6-1339P-201ENST00000363574 MAPK1P28482 360 aa7.52□□□□□ -1.21
RNU6-1339P-201ENST00000363574 GDF10P55107 478 aa7.52□□□□□ -1.21
RNU6-1339P-201ENST00000363574 CYLDQ9NQC7 956 aa7.52□□□□□ -1.21
RNU6-1339P-201ENST00000363574 DCTN4Q9UJW0 460 aa7.52□□□□□ -1.21
RNU6-1339P-201ENST00000363574 BACH1O14867 736 aa7.51□□□□□ -1.21
RNU6-1339P-201ENST00000363574 IGSF3O75054 1194 aa7.51□□□□□ -1.21
RNU6-1339P-201ENST00000363574 ITGBL1O95965 494 aaPredicted RBP7.51□□□□□ -1.21
RNU6-1339P-201ENST00000363574 FSHRP23945 695 aa7.51□□□□□ -1.21
RNU6-1339P-201ENST00000363574 GRM5P41594 1212 aa7.51□□□□□ -1.21
RNU6-1339P-201ENST00000363574 EPHA4P54764 986 aa7.51□□□□□ -1.21
RNU6-1339P-201ENST00000363574 KCNC4Q03721 635 aa7.51□□□□□ -1.21
RNU6-1339P-201ENST00000363574 NAA30Q147X3 362 aaPredicted RBP7.51□□□□□ -1.21
RNU6-1339P-201ENST00000363574 ARID5BQ14865 1188 aa7.51□□□□□ -1.21
RNU6-1339P-201ENST00000363574 TNS4Q8IZW8 715 aa7.51□□□□□ -1.21
RNU6-1339P-201ENST00000363574 EHBP1Q8NDI1 1231 aa7.51□□□□□ -1.21
RNU6-1339P-201ENST00000363574 HELQQ8TDG4 1101 aa7.51□□□□□ -1.21
RNU6-1339P-201ENST00000363574 SCG3Q8WXD2 468 aaKnown RBP7.51□□□□□ -1.21
RNU6-1339P-201ENST00000363574 ASB16Q96NS5 453 aa7.51□□□□□ -1.21
RNU6-1339P-201ENST00000363574 ESF1Q9H501 851 aaKnown RBP7.51□□□□□ -1.21
RNU6-1339P-201ENST00000363574 INHAP05111 366 aa7.5□□□□□ -1.21
RNU6-1339P-201ENST00000363574 RPIAP49247 311 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms