RNA–Protein interactions for RNA: ENST00000360688.3

GDPD3-201, Transcript of glycerophosphodiester phosphodiesterase domain containing 3, humanhuman

TSL 1 (best)

Gene GDPD3, Length 1,306 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD3-201ENST00000360688 SYTL4Q96C24 671 aaPredicted RBP21.11■□□□□ 0.97
GDPD3-201ENST00000360688 RTL1A6NKG5 1358 aa21.11■□□□□ 0.97
GDPD3-201ENST00000360688 FYB1O15117 783 aa21.1■□□□□ 0.97
GDPD3-201ENST00000360688 RRS1Q15050 365 aaKnown RBP21.1■□□□□ 0.97
GDPD3-201ENST00000360688 ZCRB1Q8TBF4 217 aaKnown RBP21.1■□□□□ 0.97
GDPD3-201ENST00000360688 GGNBP2Q9H3C7 697 aa21.1■□□□□ 0.97
GDPD3-201ENST00000360688 COL24A1Q17RW2 1714 aa21.1■□□□□ 0.97
GDPD3-201ENST00000360688 NSD2O96028 1365 aa21.09■□□□□ 0.97
GDPD3-201ENST00000360688 MAP3K5Q99683 1374 aa21.09■□□□□ 0.97
GDPD3-201ENST00000360688 TMF1P82094 1093 aa21.09■□□□□ 0.97
GDPD3-201ENST00000360688 USP47Q96K76 1375 aa21.08■□□□□ 0.97
GDPD3-201ENST00000360688 KCNQ4P56696 695 aa21.08■□□□□ 0.97
GDPD3-201ENST00000360688 NBPF6Q5VWK0 638 aa21.08■□□□□ 0.97
GDPD3-201ENST00000360688 NBPF4Q96M43 638 aa21.08■□□□□ 0.97
GDPD3-201ENST00000360688 KIF20BQ96Q89 1820 aa21.08■□□□□ 0.97
GDPD3-201ENST00000360688 PNPLA7Q6ZV29 1317 aa21.07■□□□□ 0.96
GDPD3-201ENST00000360688 SLC16A10Q8TF71 515 aa21.07■□□□□ 0.96
GDPD3-201ENST00000360688 USHBP1Q8N6Y0 703 aa21.05■□□□□ 0.96
GDPD3-201ENST00000360688 TFCP2L1Q9NZI6 479 aa21.04■□□□□ 0.96
GDPD3-201ENST00000360688 CGNL1Q0VF96 1302 aa21.04■□□□□ 0.96
GDPD3-201ENST00000360688 ZNF784Q8NCA9 323 aaPredicted RBP21.04■□□□□ 0.96
GDPD3-201ENST00000360688 SMG6Q86US8 1419 aaKnown RBP21.03■□□□□ 0.96
GDPD3-201ENST00000360688 HSP90AB2PQ58FF8 381 aa21.03■□□□□ 0.96
GDPD3-201ENST00000360688 RAPGEF4Q8WZA2 1011 aa21.03■□□□□ 0.96
GDPD3-201ENST00000360688 CCNL1Q9UK58 526 aaPredicted RBP21.03■□□□□ 0.96
GDPD3-201ENST00000360688 INSRP06213 1382 aa21.02■□□□□ 0.96
GDPD3-201ENST00000360688 GOLGB1Q14789 3259 aaKnown RBP21.02■□□□□ 0.95
GDPD3-201ENST00000360688 POLD1P28340 1107 aa21.02■□□□□ 0.95
GDPD3-201ENST00000360688 TATP17735 454 aaPredicted RBP21.01■□□□□ 0.95
GDPD3-201ENST00000360688 CDCA8Q53HL2 280 aa21.01■□□□□ 0.95
GDPD3-201ENST00000360688 FLT4P35916 1363 aa21■□□□□ 0.95
GDPD3-201ENST00000360688 KIF24Q5T7B8 1368 aa21■□□□□ 0.95
GDPD3-201ENST00000360688 TRIM26Q12899 539 aaPredicted RBP20.99■□□□□ 0.95
GDPD3-201ENST00000360688 KLHL34Q8N239 644 aa20.99■□□□□ 0.95
GDPD3-201ENST00000360688 CARD14Q9BXL6 1004 aa20.98■□□□□ 0.95
GDPD3-201ENST00000360688 C5P01031 1676 aa20.97■□□□□ 0.95
GDPD3-201ENST00000360688 TAF1LQ8IZX4 1826 aa20.97■□□□□ 0.95
GDPD3-201ENST00000360688 GPR162Q16538 588 aa20.97■□□□□ 0.95
GDPD3-201ENST00000360688 PCDH11XQ9BZA7 1347 aa20.96■□□□□ 0.95
GDPD3-201ENST00000360688 PCDH11YQ9BZA8 1340 aa20.96■□□□□ 0.95
GDPD3-201ENST00000360688 ITGB4P16144 1822 aa20.96■□□□□ 0.95
GDPD3-201ENST00000360688 CYP27B1O15528 508 aa20.95■□□□□ 0.94
GDPD3-201ENST00000360688 COL23A1Q86Y22 540 aaPredicted RBP20.95■□□□□ 0.94
GDPD3-201ENST00000360688 EMILIN1Q9Y6C2 1016 aa20.95■□□□□ 0.94
GDPD3-201ENST00000360688 NSD3Q9BZ95 1437 aa20.95■□□□□ 0.94
GDPD3-201ENST00000360688 PKD1L3Q7Z443 1732 aa20.95■□□□□ 0.94
GDPD3-201ENST00000360688 TOGARAM1Q9Y4F4 1720 aa20.95■□□□□ 0.94
GDPD3-201ENST00000360688 MAP2P11137 1827 aaKnown RBP20.93■□□□□ 0.94
GDPD3-201ENST00000360688 ANKRD26Q9UPS8 1709 aa20.93■□□□□ 0.94
GDPD3-201ENST00000360688 MSH5O43196 834 aa20.93■□□□□ 0.94
GDPD3-201ENST00000360688 NLGN2Q8NFZ4 835 aa20.93■□□□□ 0.94
GDPD3-201ENST00000360688 MPRIPQ6WCQ1 1025 aa20.92■□□□□ 0.94
GDPD3-201ENST00000360688 PALLDQ8WX93 1383 aa20.92■□□□□ 0.94
GDPD3-201ENST00000360688 NCAPD2Q15021 1401 aa20.91■□□□□ 0.94
GDPD3-201ENST00000360688 PELP1Q8IZL8 1130 aaKnown RBP20.91■□□□□ 0.94
GDPD3-201ENST00000360688 PPM1GO15355 546 aaPredicted RBP20.88■□□□□ 0.93
GDPD3-201ENST00000360688 MSL1Q68DK7 614 aa20.88■□□□□ 0.93
GDPD3-201ENST00000360688 C4BP0C0L5 1744 aa20.87■□□□□ 0.93
GDPD3-201ENST00000360688 HMGB2P26583 209 aaKnown RBP20.87■□□□□ 0.93
GDPD3-201ENST00000360688 TIMELESSQ9UNS1 1208 aa20.87■□□□□ 0.93
GDPD3-201ENST00000360688 WASHC2AQ641Q2 1341 aa20.87■□□□□ 0.93
GDPD3-201ENST00000360688 NKX1-1Q15270 411 aaPredicted RBP20.86■□□□□ 0.93
GDPD3-201ENST00000360688 FLAD1Q8NFF5 587 aa20.86■□□□□ 0.93
GDPD3-201ENST00000360688 SMARCC1Q92922 1105 aaPredicted RBP20.86■□□□□ 0.93
GDPD3-201ENST00000360688 UBR3Q6ZT12 1888 aa20.86■□□□□ 0.93
GDPD3-201ENST00000360688 PIGBQ92521 554 aa20.85■□□□□ 0.93
GDPD3-201ENST00000360688 SPG7Q9UQ90 795 aa20.85■□□□□ 0.93
GDPD3-201ENST00000360688 YBX3P16989 372 aaKnown RBP eCLIP20.84■□□□□ 0.93
GDPD3-201ENST00000360688 EYA1Q99502 592 aa20.84■□□□□ 0.93
GDPD3-201ENST00000360688 C1QTNF8P60827 252 aa20.83■□□□□ 0.93
GDPD3-201ENST00000360688 AMIGO3Q86WK7 504 aa20.82■□□□□ 0.92
GDPD3-201ENST00000360688 AK7Q96M32 723 aa20.82■□□□□ 0.92
GDPD3-201ENST00000360688 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP20.82■□□□□ 0.92
GDPD3-201ENST00000360688 POLKQ9UBT6 870 aa20.82■□□□□ 0.92
GDPD3-201ENST00000360688 GRIN3BO60391 1043 aa20.81■□□□□ 0.92
GDPD3-201ENST00000360688 CD2APQ9Y5K6 639 aa20.8■□□□□ 0.92
GDPD3-201ENST00000360688 SMIM5Q71RC9 77 aa20.79■□□□□ 0.92
GDPD3-201ENST00000360688 LOC102724428A0A0B4J2F2 783 aa20.78■□□□□ 0.92
GDPD3-201ENST00000360688 SIK1P57059 783 aa20.78■□□□□ 0.92
GDPD3-201ENST00000360688 POLR3GLQ9BT43 218 aa20.78■□□□□ 0.92
GDPD3-201ENST00000360688 TMOD3Q9NYL9 352 aa20.78■□□□□ 0.92
GDPD3-201ENST00000360688 CLSPNQ9HAW4 1339 aa20.78■□□□□ 0.92
GDPD3-201ENST00000360688 SENP3-EIF4A1A0A087X0R7 540 aa20.78■□□□□ 0.92
GDPD3-201ENST00000360688 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP20.78■□□□□ 0.92
GDPD3-201ENST00000360688 PHF14O94880 888 aa20.78■□□□□ 0.92
GDPD3-201ENST00000360688 PHKG2P15735 406 aa20.78■□□□□ 0.92
GDPD3-201ENST00000360688 EIF4A2Q14240 407 aaKnown RBP20.78■□□□□ 0.92
GDPD3-201ENST00000360688 IFNL2Q8IZJ0 200 aa20.78■□□□□ 0.92
GDPD3-201ENST00000360688 LINC00116Q8NCU8 138 aa20.78■□□□□ 0.92
GDPD3-201ENST00000360688 ASAP1Q9ULH1 1129 aa20.78■□□□□ 0.92
GDPD3-201ENST00000360688 TNNT2P45379 298 aaPredicted RBP20.77■□□□□ 0.91
GDPD3-201ENST00000360688 GIGYF1O75420 1035 aaPredicted RBP20.76■□□□□ 0.91
GDPD3-201ENST00000360688 SSFA2P28290 1259 aa20.76■□□□□ 0.91
GDPD3-201ENST00000360688 ITPK1Q13572 414 aa20.74■□□□□ 0.91
GDPD3-201ENST00000360688 PCGF6Q9BYE7 350 aa20.74■□□□□ 0.91
GDPD3-201ENST00000360688 ATG3Q9NT62 314 aa20.74■□□□□ 0.91
GDPD3-201ENST00000360688 PLEKHG2Q9H7P9 1386 aa20.73■□□□□ 0.91
GDPD3-201ENST00000360688 ATP6V1AP38606 617 aa20.73■□□□□ 0.91
GDPD3-201ENST00000360688 IGSF1Q8N6C5 1336 aa20.72■□□□□ 0.91
GDPD3-201ENST00000360688 GNPATO15228 680 aa20.71■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms