RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 KIF1BPQ96EK5 621 aa19.57■□□□□ 0.72
SCAF1-201ENST00000360565 LRRFIP2Q9Y608 721 aaKnown RBP19.57■□□□□ 0.72
SCAF1-201ENST00000360565 ACEP12821 1306 aa19.57■□□□□ 0.72
SCAF1-201ENST00000360565 C8orf58Q8NAV2 365 aa19.57■□□□□ 0.72
SCAF1-201ENST00000360565 SDF4Q9BRK5 362 aa19.57■□□□□ 0.72
SCAF1-201ENST00000360565 WDR7Q9Y4E6 1490 aa19.57■□□□□ 0.72
SCAF1-201ENST00000360565 RBM33Q96EV2 1170 aaKnown RBP19.56■□□□□ 0.72
SCAF1-201ENST00000360565 JAKMIP1Q96N16 626 aaKnown RBP19.56■□□□□ 0.72
SCAF1-201ENST00000360565 GCC2Q8IWJ2 1684 aa19.56■□□□□ 0.72
SCAF1-201ENST00000360565 PUS7Q96PZ0 661 aaKnown RBP19.56■□□□□ 0.72
SCAF1-201ENST00000360565 ZNF518AQ6AHZ1 1483 aa19.55■□□□□ 0.72
SCAF1-201ENST00000360565 PBRM1Q86U86 1689 aa19.55■□□□□ 0.72
SCAF1-201ENST00000360565 TSPYL6Q8N831 410 aa19.55■□□□□ 0.72
SCAF1-201ENST00000360565 PTPRCP08575 1304 aa19.55■□□□□ 0.72
SCAF1-201ENST00000360565 AEBP1Q8IUX7 1158 aa19.55■□□□□ 0.72
SCAF1-201ENST00000360565 NPC1L1Q9UHC9 1359 aa19.55■□□□□ 0.72
SCAF1-201ENST00000360565 PHACTR3Q96KR7 559 aa19.54■□□□□ 0.72
SCAF1-201ENST00000360565 CEBPZQ03701 1054 aaKnown RBP19.54■□□□□ 0.72
SCAF1-201ENST00000360565 LARP1BQ659C4 914 aaKnown RBP19.54■□□□□ 0.72
SCAF1-201ENST00000360565 MEIS3Q99687 375 aa19.54■□□□□ 0.72
SCAF1-201ENST00000360565 BLOC1S2Q6QNY1 142 aa19.54■□□□□ 0.72
SCAF1-201ENST00000360565 TSHZ3Q63HK5 1081 aa19.53■□□□□ 0.72
SCAF1-201ENST00000360565 PES1O00541 588 aaKnown RBP19.53■□□□□ 0.72
SCAF1-201ENST00000360565 LETM1O95202 739 aaPredicted RBP19.53■□□□□ 0.72
SCAF1-201ENST00000360565 CABP4P57796 275 aa19.52■□□□□ 0.72
SCAF1-201ENST00000360565 TRIM5Q9C035 493 aa19.52■□□□□ 0.72
SCAF1-201ENST00000360565 PRKCSHP14314 528 aaPredicted RBP19.52■□□□□ 0.72
SCAF1-201ENST00000360565 TPD52L1Q16890 204 aaPredicted RBP19.52■□□□□ 0.72
SCAF1-201ENST00000360565 PDRG1Q9NUG6 133 aa19.52■□□□□ 0.72
SCAF1-201ENST00000360565 A0A1W2PP64 1363 aa19.52■□□□□ 0.72
SCAF1-201ENST00000360565 VAMP4O75379 141 aa19.52■□□□□ 0.72
SCAF1-201ENST00000360565 GLRX3O76003 335 aaKnown RBP19.52■□□□□ 0.72
SCAF1-201ENST00000360565 MRPL50Q8N5N7 158 aaKnown RBP19.52■□□□□ 0.72
SCAF1-201ENST00000360565 MPRIPQ6WCQ1 1025 aa19.51■□□□□ 0.71
SCAF1-201ENST00000360565 PPP6R1Q9UPN7 881 aa19.51■□□□□ 0.71
SCAF1-201ENST00000360565 TTC21BQ7Z4L5 1316 aa19.51■□□□□ 0.71
SCAF1-201ENST00000360565 SYCE3A1L190 88 aa19.51■□□□□ 0.71
SCAF1-201ENST00000360565 KCNH5Q8NCM2 988 aa19.51■□□□□ 0.71
SCAF1-201ENST00000360565 ZBTB40Q9NUA8 1239 aa19.51■□□□□ 0.71
SCAF1-201ENST00000360565 KDM2BQ8NHM5 1336 aa19.51■□□□□ 0.71
SCAF1-201ENST00000360565 FOXO3O43524 673 aa19.51■□□□□ 0.71
SCAF1-201ENST00000360565 CASTP20810 708 aaKnown RBP19.51■□□□□ 0.71
SCAF1-201ENST00000360565 TTC22Q5TAA0 569 aa19.51■□□□□ 0.71
SCAF1-201ENST00000360565 VPS37DQ86XT2 251 aa19.51■□□□□ 0.71
SCAF1-201ENST00000360565 DDX54Q8TDD1 881 aaKnown RBP19.51■□□□□ 0.71
SCAF1-201ENST00000360565 PHF8Q9UPP1 1060 aa19.51■□□□□ 0.71
SCAF1-201ENST00000360565 KRT85P78386 507 aa19.5■□□□□ 0.71
SCAF1-201ENST00000360565 STRN4Q9NRL3 753 aa19.5■□□□□ 0.71
SCAF1-201ENST00000360565 SPG7Q9UQ90 795 aa19.5■□□□□ 0.71
SCAF1-201ENST00000360565 SMC5Q8IY18 1101 aa19.5■□□□□ 0.71
SCAF1-201ENST00000360565 RAB11FIP3O75154 756 aa19.5■□□□□ 0.71
SCAF1-201ENST00000360565 KDM4AO75164 1064 aa19.5■□□□□ 0.71
SCAF1-201ENST00000360565 DNAAF4Q8WXU2 420 aa19.5■□□□□ 0.71
SCAF1-201ENST00000360565 FAM177BA6PVY3 158 aa19.49■□□□□ 0.71
SCAF1-201ENST00000360565 ANKRD1Q15327 319 aa19.49■□□□□ 0.71
SCAF1-201ENST00000360565 ABCC10Q5T3U5 1492 aa19.49■□□□□ 0.71
SCAF1-201ENST00000360565 KINO60870 393 aaKnown RBP19.49■□□□□ 0.71
SCAF1-201ENST00000360565 RBM42Q9BTD8 480 aaKnown RBP19.49■□□□□ 0.71
SCAF1-201ENST00000360565 KRT24Q2M2I5 525 aa19.49■□□□□ 0.71
SCAF1-201ENST00000360565 POGZQ7Z3K3 1410 aa19.48■□□□□ 0.71
SCAF1-201ENST00000360565 ABCC2Q92887 1545 aa19.48■□□□□ 0.71
SCAF1-201ENST00000360565 CCAR2Q8N163 923 aaKnown RBP19.48■□□□□ 0.71
SCAF1-201ENST00000360565 SAFBQ15424 915 aaKnown RBP eCLIP19.48■□□□□ 0.71
SCAF1-201ENST00000360565 SPC24Q8NBT2 197 aa19.48■□□□□ 0.71
SCAF1-201ENST00000360565 TARBP1Q13395 1621 aaKnown RBP19.48■□□□□ 0.71
SCAF1-201ENST00000360565 ERICH2A1L162 156 aa19.47■□□□□ 0.71
SCAF1-201ENST00000360565 SDSP20132 328 aa19.47■□□□□ 0.71
SCAF1-201ENST00000360565 TOM1L2Q6ZVM7 507 aa19.47■□□□□ 0.71
SCAF1-201ENST00000360565 FERMT3Q86UX7 667 aa19.47■□□□□ 0.71
SCAF1-201ENST00000360565 HOMER1Q86YM7 354 aa19.47■□□□□ 0.71
SCAF1-201ENST00000360565 ZMYM4Q5VZL5 1548 aa19.47■□□□□ 0.71
SCAF1-201ENST00000360565 PRPF40BQ6NWY9 871 aaKnown RBP19.47■□□□□ 0.71
SCAF1-201ENST00000360565 ANKRD44Q8N8A2 993 aa19.47■□□□□ 0.71
SCAF1-201ENST00000360565 TPM3P06753 285 aa19.47■□□□□ 0.71
SCAF1-201ENST00000360565 EIF4A2Q14240 407 aaKnown RBP19.47■□□□□ 0.71
SCAF1-201ENST00000360565 C16orf71Q8IYS4 520 aaPredicted RBP19.47■□□□□ 0.71
SCAF1-201ENST00000360565 MBD5Q9P267 1494 aa19.47■□□□□ 0.71
SCAF1-201ENST00000360565 BLMP54132 1417 aaPredicted RBP19.47■□□□□ 0.71
SCAF1-201ENST00000360565 ZSCAN31Q96LW9 406 aaPredicted RBP19.47■□□□□ 0.71
SCAF1-201ENST00000360565 BOLA2Q9H3K6 86 aa19.47■□□□□ 0.71
SCAF1-201ENST00000360565 ANXA1P04083 346 aa19.46■□□□□ 0.71
SCAF1-201ENST00000360565 NCKAP5LQ9HCH0 1330 aa19.46■□□□□ 0.71
SCAF1-201ENST00000360565 CCDC192P0DO97 292 aa19.46■□□□□ 0.71
SCAF1-201ENST00000360565 CCDC83Q8IWF9 413 aa19.46■□□□□ 0.71
SCAF1-201ENST00000360565 FMNL2Q96PY5 1086 aa19.46■□□□□ 0.71
SCAF1-201ENST00000360565 BCL11BQ9C0K0 894 aaPredicted RBP19.46■□□□□ 0.71
SCAF1-201ENST00000360565 BAG4O95429 457 aaKnown RBP19.45■□□□□ 0.7
SCAF1-201ENST00000360565 LARP6Q9BRS8 491 aaKnown RBP19.45■□□□□ 0.7
SCAF1-201ENST00000360565 PPIP5K1Q6PFW1 1433 aa19.45■□□□□ 0.7
SCAF1-201ENST00000360565 PRDM11Q9NQV5 511 aa19.45■□□□□ 0.7
SCAF1-201ENST00000360565 PI4KAP2A4QPH2 592 aa19.45■□□□□ 0.7
SCAF1-201ENST00000360565 CCDC158Q5M9N0 1113 aa19.45■□□□□ 0.7
SCAF1-201ENST00000360565 PI4KAP1Q8N8J0 262 aa19.45■□□□□ 0.7
SCAF1-201ENST00000360565 CEP170Q5SW79 1584 aa19.44■□□□□ 0.7
SCAF1-201ENST00000360565 PPP1R42Q7Z4L9 355 aa19.44■□□□□ 0.7
SCAF1-201ENST00000360565 CCDC8Q9H0W5 538 aaPredicted RBP19.44■□□□□ 0.7
SCAF1-201ENST00000360565 DBF4Q9UBU7 674 aaPredicted RBP19.44■□□□□ 0.7
SCAF1-201ENST00000360565 TBC1D2BQ9UPU7 963 aa19.44■□□□□ 0.7
SCAF1-201ENST00000360565 MARCH6O60337 910 aa19.44■□□□□ 0.7
SCAF1-201ENST00000360565 ATP2B1P20020 1258 aa19.44■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 85.8 ms