RNA–Protein interactions for RNA: ENST00000357798.9

NPAS3-203, Transcript of neuronal PAS domain protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NPAS3, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3-203ENST00000357798 SDSP20132 328 aa29.09■■■□□ 2.25
NPAS3-203ENST00000357798 PRPF40AO75400 957 aaKnown RBP29.08■■■□□ 2.25
NPAS3-203ENST00000357798 REC8O95072 547 aa29.08■■■□□ 2.25
NPAS3-203ENST00000357798 FBLN1P23142 703 aa29.08■■■□□ 2.25
NPAS3-203ENST00000357798 MCM5P33992 734 aa29.08■■■□□ 2.25
NPAS3-203ENST00000357798 ZDHHC9Q9Y397 364 aa29.08■■■□□ 2.25
NPAS3-203ENST00000357798 EIF2AK3Q9NZJ5 1116 aaKnown RBP29.07■■■□□ 2.24
NPAS3-203ENST00000357798 DLC1Q96QB1 1528 aa29.07■■■□□ 2.24
NPAS3-203ENST00000357798 LRSAM1Q6UWE0 723 aa29.07■■■□□ 2.24
NPAS3-203ENST00000357798 ZGPATQ8N5A5 531 aaKnown RBP29.07■■■□□ 2.24
NPAS3-203ENST00000357798 AATKQ6ZMQ8 1374 aa29.06■■■□□ 2.24
NPAS3-203ENST00000357798 RGS12O14924 1447 aa29.06■■■□□ 2.24
NPAS3-203ENST00000357798 CEP85Q6P2H3 762 aa29.06■■■□□ 2.24
NPAS3-203ENST00000357798 OTUD7AQ8TE49 926 aaPredicted RBP29.05■■■□□ 2.24
NPAS3-203ENST00000357798 MAP7D2Q96T17 732 aa29.05■■■□□ 2.24
NPAS3-203ENST00000357798 ZKSCAN5Q9Y2L8 839 aa29.05■■■□□ 2.24
NPAS3-203ENST00000357798 EMILIN1Q9Y6C2 1016 aa29.05■■■□□ 2.24
NPAS3-203ENST00000357798 HAP1P54257 671 aaPredicted RBP29.04■■■□□ 2.24
NPAS3-203ENST00000357798 EDC4Q6P2E9 1401 aaKnown RBP29.04■■■□□ 2.24
NPAS3-203ENST00000357798 RBM27Q9P2N5 1060 aaKnown RBP29.04■■■□□ 2.24
NPAS3-203ENST00000357798 CSPP1Q1MSJ5 1256 aa29.03■■■□□ 2.24
NPAS3-203ENST00000357798 R3HCC1Q9Y3T6 440 aaKnown RBP29.03■■■□□ 2.24
NPAS3-203ENST00000357798 SENP3Q9H4L4 574 aaPredicted RBP29.02■■■□□ 2.24
NPAS3-203ENST00000357798 ERC2O15083 957 aa29.02■■■□□ 2.24
NPAS3-203ENST00000357798 MBD3O95983 291 aa29.02■■■□□ 2.24
NPAS3-203ENST00000357798 RTL1A6NKG5 1358 aa29.02■■■□□ 2.24
NPAS3-203ENST00000357798 NEO1Q92859 1461 aa29.01■■■□□ 2.23
NPAS3-203ENST00000357798 TMEM63CQ9P1W3 806 aa29.01■■■□□ 2.23
NPAS3-203ENST00000357798 CCDC39Q9UFE4 941 aa29.01■■■□□ 2.23
NPAS3-203ENST00000357798 MSH6P52701 1360 aa28.98■■■□□ 2.23
NPAS3-203ENST00000357798 FAM83GA6ND36 823 aa28.97■■■□□ 2.23
NPAS3-203ENST00000357798 XPCQ01831 940 aaPredicted RBP28.97■■■□□ 2.23
NPAS3-203ENST00000357798 PTPRCP08575 1304 aa28.97■■■□□ 2.23
NPAS3-203ENST00000357798 SMARCA5O60264 1052 aaPredicted RBP28.97■■■□□ 2.23
NPAS3-203ENST00000357798 NPM1P06748 294 aaKnown RBP eCLIP28.97■■■□□ 2.23
NPAS3-203ENST00000357798 MCM2P49736 904 aa28.96■■■□□ 2.23
NPAS3-203ENST00000357798 OSBPL3Q9H4L5 887 aa28.96■■■□□ 2.23
NPAS3-203ENST00000357798 SYCE3A1L190 88 aa28.96■■■□□ 2.23
NPAS3-203ENST00000357798 KIAA0232Q92628 1395 aa28.95■■■□□ 2.23
NPAS3-203ENST00000357798 NRKQ7Z2Y5 1582 aa28.94■■■□□ 2.22
NPAS3-203ENST00000357798 RIMBP3CA6NJZ7 1639 aa28.93■■■□□ 2.22
NPAS3-203ENST00000357798 RIMBP3BA6NNM3 1639 aa28.93■■■□□ 2.22
NPAS3-203ENST00000357798 RIMBP3Q9UFD9 1639 aa28.93■■■□□ 2.22
NPAS3-203ENST00000357798 UQCRHLA0A096LP55 91 aa28.93■■■□□ 2.22
NPAS3-203ENST00000357798 UQCRHP07919 91 aa28.93■■■□□ 2.22
NPAS3-203ENST00000357798 RBM10P98175 930 aaKnown RBP28.93■■■□□ 2.22
NPAS3-203ENST00000357798 DCTN1Q14203 1278 aa28.93■■■□□ 2.22
NPAS3-203ENST00000357798 NME9Q86XW9 330 aa28.93■■■□□ 2.22
NPAS3-203ENST00000357798 MON2Q7Z3U7 1717 aa28.92■■■□□ 2.22
NPAS3-203ENST00000357798 BRD1O95696 1058 aa28.92■■■□□ 2.22
NPAS3-203ENST00000357798 NSFL1CQ9UNZ2 370 aaKnown RBP28.92■■■□□ 2.22
NPAS3-203ENST00000357798 HMMRO75330 724 aa28.92■■■□□ 2.22
NPAS3-203ENST00000357798 TMX3Q96JJ7 454 aa28.92■■■□□ 2.22
NPAS3-203ENST00000357798 TUBGCP6Q96RT7 1819 aa28.92■■■□□ 2.22
NPAS3-203ENST00000357798 RICTORQ6R327 1708 aa28.92■■■□□ 2.22
NPAS3-203ENST00000357798 RAPGEF3O95398 923 aa28.91■■■□□ 2.22
NPAS3-203ENST00000357798 CUL4AQ13619 759 aa28.91■■■□□ 2.22
NPAS3-203ENST00000357798 SETD1AO15047 1707 aaKnown RBP28.91■■■□□ 2.22
NPAS3-203ENST00000357798 DYNC1I1O14576 645 aa28.91■■■□□ 2.22
NPAS3-203ENST00000357798 MEIS3Q99687 375 aa28.91■■■□□ 2.22
NPAS3-203ENST00000357798 MTERF4Q7Z6M4 381 aaKnown RBP28.9■■■□□ 2.22
NPAS3-203ENST00000357798 CHL1O00533 1208 aa28.9■■■□□ 2.22
NPAS3-203ENST00000357798 APBB1O00213 710 aa28.89■■■□□ 2.22
NPAS3-203ENST00000357798 NEK4P51957 841 aa28.89■■■□□ 2.22
NPAS3-203ENST00000357798 PDE1AP54750 535 aa28.88■■■□□ 2.21
NPAS3-203ENST00000357798 SASS6Q6UVJ0 657 aa28.88■■■□□ 2.21
NPAS3-203ENST00000357798 COG3Q96JB2 828 aa28.88■■■□□ 2.21
NPAS3-203ENST00000357798 FAM13BQ9NYF5 915 aa28.88■■■□□ 2.21
NPAS3-203ENST00000357798 SYAP1Q96A49 352 aaPredicted RBP28.88■■■□□ 2.21
NPAS3-203ENST00000357798 INTS4Q96HW7 963 aaKnown RBP28.88■■■□□ 2.21
NPAS3-203ENST00000357798 CHAMP1Q96JM3 812 aa28.87■■■□□ 2.21
NPAS3-203ENST00000357798 TSPY26PQ9H489 355 aa28.87■■■□□ 2.21
NPAS3-203ENST00000357798 WAPLQ7Z5K2 1190 aa28.87■■■□□ 2.21
NPAS3-203ENST00000357798 ZRANB1Q9UGI0 708 aa28.86■■■□□ 2.21
NPAS3-203ENST00000357798 MCCP23508 829 aa28.85■■■□□ 2.21
NPAS3-203ENST00000357798 C3P01024 1663 aa28.85■■■□□ 2.21
NPAS3-203ENST00000357798 CPS1P31327 1500 aa28.85■■■□□ 2.21
NPAS3-203ENST00000357798 ANAPC15P60006 121 aa28.85■■■□□ 2.21
NPAS3-203ENST00000357798 AKAP12Q02952 1782 aa28.85■■■□□ 2.21
NPAS3-203ENST00000357798 KRT24Q2M2I5 525 aa28.84■■■□□ 2.21
NPAS3-203ENST00000357798 RRS1Q15050 365 aaKnown RBP28.84■■■□□ 2.21
NPAS3-203ENST00000357798 ESYT1Q9BSJ8 1104 aa28.84■■■□□ 2.21
NPAS3-203ENST00000357798 FOXD4L5Q5VV16 416 aaPredicted RBP28.83■■■□□ 2.21
NPAS3-203ENST00000357798 FOXD4L4Q8WXT5 416 aaPredicted RBP28.83■■■□□ 2.21
NPAS3-203ENST00000357798 SSH2Q76I76 1423 aa28.83■■■□□ 2.21
NPAS3-203ENST00000357798 IL17RAQ96F46 866 aa28.82■■■□□ 2.2
NPAS3-203ENST00000357798 WASLO00401 505 aaPredicted RBP28.82■■■□□ 2.2
NPAS3-203ENST00000357798 SALL3Q9BXA9 1300 aa28.81■■■□□ 2.2
NPAS3-203ENST00000357798 PHF14O94880 888 aa28.81■■■□□ 2.2
NPAS3-203ENST00000357798 RNF214Q8ND24 703 aa28.81■■■□□ 2.2
NPAS3-203ENST00000357798 ITSN1Q15811 1721 aa28.81■■■□□ 2.2
NPAS3-203ENST00000357798 CCT4P50991 539 aaKnown RBP28.79■■■□□ 2.2
NPAS3-203ENST00000357798 KIAA2012Q0VF49 1180 aa28.79■■■□□ 2.2
NPAS3-203ENST00000357798 PTMAP06454 111 aaKnown RBP28.78■■■□□ 2.2
NPAS3-203ENST00000357798 ABCF1Q8NE71 845 aaKnown RBP eCLIP28.78■■■□□ 2.2
NPAS3-203ENST00000357798 STAG3Q9UJ98 1225 aa28.77■■■□□ 2.2
NPAS3-203ENST00000357798 UVSSAQ2YD98 709 aa28.77■■■□□ 2.2
NPAS3-203ENST00000357798 FBXO31Q5XUX0 539 aaPredicted RBP28.76■■■□□ 2.19
NPAS3-203ENST00000357798 AEBP1Q8IUX7 1158 aa28.76■■■□□ 2.19
NPAS3-203ENST00000357798 FAM184AQ8NB25 1140 aa28.76■■■□□ 2.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms