RNA–Protein interactions for RNA: ENST00000355238.10

SYNCRIP-201, Transcript of synaptotagmin binding cytoplasmic RNA interacting protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SYNCRIP, Length 6,449 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNCRIP-201ENST00000355238 JPH4Q96JJ6 628 aa14.9□□□□□ -0.02
SYNCRIP-201ENST00000355238 CASKIN1Q8WXD9 1431 aa14.9□□□□□ -0.02
SYNCRIP-201ENST00000355238 KIF4BQ2VIQ3 1234 aa14.9□□□□□ -0.02
SYNCRIP-201ENST00000355238 NOL7Q9UMY1 257 aaKnown RBP14.9□□□□□ -0.02
SYNCRIP-201ENST00000355238 GOLGA6L9A6NEM1 432 aa14.9□□□□□ -0.02
SYNCRIP-201ENST00000355238 KDM4AO75164 1064 aa14.9□□□□□ -0.02
SYNCRIP-201ENST00000355238 SLC4A2P04920 1241 aa14.9□□□□□ -0.02
SYNCRIP-201ENST00000355238 NBPF8Q3BBV2 869 aa14.9□□□□□ -0.02
SYNCRIP-201ENST00000355238 AIMP1Q12904 312 aaKnown RBP14.89□□□□□ -0.03
SYNCRIP-201ENST00000355238 SH2B1Q9NRF2 756 aaPredicted RBP14.89□□□□□ -0.03
SYNCRIP-201ENST00000355238 DDX19AQ9NUU7 478 aaKnown RBP14.89□□□□□ -0.03
SYNCRIP-201ENST00000355238 FBXO3Q9UK99 471 aa14.89□□□□□ -0.03
SYNCRIP-201ENST00000355238 HFM1A2PYH4 1435 aa14.89□□□□□ -0.03
SYNCRIP-201ENST00000355238 CCDC83Q8IWF9 413 aa14.89□□□□□ -0.03
SYNCRIP-201ENST00000355238 BBXQ8WY36 941 aaPredicted RBP14.89□□□□□ -0.03
SYNCRIP-201ENST00000355238 SMARCC1Q92922 1105 aaPredicted RBP14.89□□□□□ -0.03
SYNCRIP-201ENST00000355238 CADPSQ9ULU8 1353 aa14.89□□□□□ -0.03
SYNCRIP-201ENST00000355238 TOP1P11387 765 aaKnown RBP14.89□□□□□ -0.03
SYNCRIP-201ENST00000355238 XRCC6P12956 609 aaKnown RBP eCLIP14.89□□□□□ -0.034e-6■■■■□ 25.4
SYNCRIP-201ENST00000355238 BAG4O95429 457 aaKnown RBP14.89□□□□□ -0.03
SYNCRIP-201ENST00000355238 CAVIN2O95810 425 aa14.89□□□□□ -0.03
SYNCRIP-201ENST00000355238 POLA1P09884 1462 aaPredicted RBP14.88□□□□□ -0.03
SYNCRIP-201ENST00000355238 GTF2A1P52655 376 aaPredicted RBP14.88□□□□□ -0.03
SYNCRIP-201ENST00000355238 HS1BP3Q53T59 392 aa14.88□□□□□ -0.03
SYNCRIP-201ENST00000355238 TBC1D32Q96NH3 1257 aa14.88□□□□□ -0.03
SYNCRIP-201ENST00000355238 CABP2Q9NPB3 220 aa14.88□□□□□ -0.03
SYNCRIP-201ENST00000355238 CCDC171Q6TFL3 1326 aa14.87□□□□□ -0.03
SYNCRIP-201ENST00000355238 CEP135Q66GS9 1140 aa14.87□□□□□ -0.03
SYNCRIP-201ENST00000355238 ZNF397Q8NF99 534 aaPredicted RBP14.87□□□□□ -0.03
SYNCRIP-201ENST00000355238 IVLP07476 585 aa14.87□□□□□ -0.03
SYNCRIP-201ENST00000355238 CASTP20810 708 aaKnown RBP14.87□□□□□ -0.03
SYNCRIP-201ENST00000355238 MAP2K1Q02750 393 aaPredicted RBP14.87□□□□□ -0.03
SYNCRIP-201ENST00000355238 TANGO6Q9C0B7 1094 aa14.87□□□□□ -0.03
SYNCRIP-201ENST00000355238 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.87□□□□□ -0.036e-14■■■■■ 27.2
SYNCRIP-201ENST00000355238 SLC3A2P08195 630 aaKnown RBP14.87□□□□□ -0.03
SYNCRIP-201ENST00000355238 LMAN1P49257 510 aa14.87□□□□□ -0.03
SYNCRIP-201ENST00000355238 CCDC94Q9BW85 323 aaPredicted RBP14.87□□□□□ -0.03
SYNCRIP-201ENST00000355238 LRSAM1Q6UWE0 723 aa14.87□□□□□ -0.03
SYNCRIP-201ENST00000355238 KIAA1107Q9UPP5 1409 aa14.87□□□□□ -0.03
SYNCRIP-201ENST00000355238 EIF5P55010 431 aaKnown RBP14.87□□□□□ -0.03
SYNCRIP-201ENST00000355238 TMEM57Q8N5G2 664 aa14.87□□□□□ -0.03
SYNCRIP-201ENST00000355238 NKTRP30414 1462 aaKnown RBP14.87□□□□□ -0.03
SYNCRIP-201ENST00000355238 KRT18P05783 430 aaKnown RBP14.86□□□□□ -0.03
SYNCRIP-201ENST00000355238 SNW1Q13573 536 aaKnown RBP14.86□□□□□ -0.03
SYNCRIP-201ENST00000355238 ZSCAN23Q3MJ62 389 aa14.86□□□□□ -0.03
SYNCRIP-201ENST00000355238 ERBINQ96RT1 1412 aa14.86□□□□□ -0.03
SYNCRIP-201ENST00000355238 ANKRD62A6NC57 917 aa14.86□□□□□ -0.03
SYNCRIP-201ENST00000355238 CCDC158Q5M9N0 1113 aa14.86□□□□□ -0.03
SYNCRIP-201ENST00000355238 SLTMQ9NWH9 1034 aaKnown RBP eCLIP14.86□□□□□ -0.032e-6■□□□□ 9.5
SYNCRIP-201ENST00000355238 RNF187Q5TA31 235 aaPredicted RBP14.86□□□□□ -0.03
SYNCRIP-201ENST00000355238 CWC27Q6UX04 472 aaKnown RBP14.86□□□□□ -0.03
SYNCRIP-201ENST00000355238 DNAAF4Q8WXU2 420 aa14.86□□□□□ -0.03
SYNCRIP-201ENST00000355238 CTNNA3Q9UI47 895 aa14.86□□□□□ -0.03
SYNCRIP-201ENST00000355238 IPO4Q8TEX9 1081 aaKnown RBP14.85□□□□□ -0.03
SYNCRIP-201ENST00000355238 WASF1Q92558 559 aa14.85□□□□□ -0.03
SYNCRIP-201ENST00000355238 TRMT1Q9NXH9 659 aaKnown RBP14.85□□□□□ -0.03
SYNCRIP-201ENST00000355238 CCDC69A6NI79 296 aa14.85□□□□□ -0.03
SYNCRIP-201ENST00000355238 GBP2P32456 591 aaPredicted RBP14.85□□□□□ -0.03
SYNCRIP-201ENST00000355238 SPA17Q15506 151 aa14.85□□□□□ -0.03
SYNCRIP-201ENST00000355238 CEP131Q9UPN4 1083 aa14.85□□□□□ -0.03
SYNCRIP-201ENST00000355238 GOLGA6L10A0A0M3HER8 536 aa14.85□□□□□ -0.03
SYNCRIP-201ENST00000355238 NOLC1Q14978 699 aaKnown RBP eCLIP14.85□□□□□ -0.03
SYNCRIP-201ENST00000355238 ZKSCAN5Q9Y2L8 839 aa14.85□□□□□ -0.03
SYNCRIP-201ENST00000355238 LRPPRCP42704 1394 aaKnown RBP14.85□□□□□ -0.03
SYNCRIP-201ENST00000355238 DHX37Q8IY37 1157 aaKnown RBP14.84□□□□□ -0.03
SYNCRIP-201ENST00000355238 MAP4K4O95819 1239 aaPredicted RBP14.84□□□□□ -0.03
SYNCRIP-201ENST00000355238 SMAP1Q8IYB5 467 aaPredicted RBP14.84□□□□□ -0.03
SYNCRIP-201ENST00000355238 C20orf194Q5TEA3 1177 aa14.84□□□□□ -0.03
SYNCRIP-201ENST00000355238 ZNF644Q9H582 1327 aaPredicted RBP14.84□□□□□ -0.03
SYNCRIP-201ENST00000355238 MNAT1P51948 309 aa14.84□□□□□ -0.03
SYNCRIP-201ENST00000355238 TICAM2Q86XR7 235 aa14.84□□□□□ -0.03
SYNCRIP-201ENST00000355238 CCDC150Q8NCX0 1101 aa14.84□□□□□ -0.03
SYNCRIP-201ENST00000355238 FYB1O15117 783 aa14.84□□□□□ -0.03
SYNCRIP-201ENST00000355238 CCDC57Q2TAC2 916 aa14.84□□□□□ -0.03
SYNCRIP-201ENST00000355238 TTC39AQ5SRH9 613 aa14.83□□□□□ -0.03
SYNCRIP-201ENST00000355238 IGF1RP08069 1367 aa14.83□□□□□ -0.03
SYNCRIP-201ENST00000355238 FERMT3Q86UX7 667 aa14.83□□□□□ -0.04
SYNCRIP-201ENST00000355238 LUZP1Q86V48 1076 aa14.83□□□□□ -0.04
SYNCRIP-201ENST00000355238 STX1AQ16623 288 aa14.83□□□□□ -0.04
SYNCRIP-201ENST00000355238 CTR9Q6PD62 1173 aa14.83□□□□□ -0.04
SYNCRIP-201ENST00000355238 RARSP54136 660 aaKnown RBP14.83□□□□□ -0.04
SYNCRIP-201ENST00000355238 UBE2HP62256 183 aa14.83□□□□□ -0.04
SYNCRIP-201ENST00000355238 RAPGEF4Q8WZA2 1011 aa14.83□□□□□ -0.04
SYNCRIP-201ENST00000355238 NACAP1Q9BZK3 213 aa14.82□□□□□ -0.04
SYNCRIP-201ENST00000355238 PAFAH1B1P43034 410 aa14.82□□□□□ -0.04
SYNCRIP-201ENST00000355238 HDGFL1Q5TGJ6 251 aa14.82□□□□□ -0.04
SYNCRIP-201ENST00000355238 IRX3P78415 501 aaPredicted RBP14.82□□□□□ -0.04
SYNCRIP-201ENST00000355238 ZSCAN25Q6NSZ9 544 aa14.82□□□□□ -0.04
SYNCRIP-201ENST00000355238 ALDH1L2Q3SY69 923 aa14.82□□□□□ -0.04
SYNCRIP-201ENST00000355238 LIMCH1Q9UPQ0 1083 aa14.82□□□□□ -0.04
SYNCRIP-201ENST00000355238 ERICH3Q5RHP9 1530 aa14.82□□□□□ -0.04
SYNCRIP-201ENST00000355238 AACSQ86V21 672 aa14.81□□□□□ -0.04
SYNCRIP-201ENST00000355238 TUBB4AP04350 444 aa14.81□□□□□ -0.04
SYNCRIP-201ENST00000355238 MX1P20591 662 aa14.81□□□□□ -0.04
SYNCRIP-201ENST00000355238 SMC1AQ14683 1233 aaKnown RBP14.81□□□□□ -0.04
SYNCRIP-201ENST00000355238 CCDC91Q7Z6B0 441 aa14.81□□□□□ -0.04
SYNCRIP-201ENST00000355238 SKAP1Q86WV1 359 aa14.81□□□□□ -0.04
SYNCRIP-201ENST00000355238 ANKRD30BQ9BXX2 1392 aa14.81□□□□□ -0.04
SYNCRIP-201ENST00000355238 BMP2KLQ5H9B9 411 aa14.81□□□□□ -0.04
SYNCRIP-201ENST00000355238 CKAP2LQ8IYA6 745 aa14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms