RNA–Protein interactions for RNA: ENST00000353319.8

PTPN2-203, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 1,542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-203ENST00000353319 MSH6P52701 1360 aa13.5□□□□□ -0.25
PTPN2-203ENST00000353319 CRB1P82279 1406 aa13.5□□□□□ -0.25
PTPN2-203ENST00000353319 DCTN1Q14203 1278 aa13.49□□□□□ -0.25
PTPN2-203ENST00000353319 MVPQ14764 893 aaKnown RBP13.49□□□□□ -0.25
PTPN2-203ENST00000353319 ALS2Q96Q42 1657 aa13.49□□□□□ -0.25
PTPN2-203ENST00000353319 KIAA0232Q92628 1395 aa13.49□□□□□ -0.25
PTPN2-203ENST00000353319 NOB1Q9ULX3 412 aaKnown RBP13.49□□□□□ -0.25
PTPN2-203ENST00000353319 TRIM27P14373 513 aa13.48□□□□□ -0.25
PTPN2-203ENST00000353319 TWISTNBQ3B726 338 aaPredicted RBP13.48□□□□□ -0.25
PTPN2-203ENST00000353319 MRPL50Q8N5N7 158 aaKnown RBP13.48□□□□□ -0.25
PTPN2-203ENST00000353319 TSPYL6Q8N831 410 aa13.48□□□□□ -0.25
PTPN2-203ENST00000353319 RTF1Q92541 710 aaKnown RBP13.48□□□□□ -0.25
PTPN2-203ENST00000353319 TNNQ9UQP3 1299 aa13.48□□□□□ -0.25
PTPN2-203ENST00000353319 NPHP3Q7Z494 1330 aa13.48□□□□□ -0.25
PTPN2-203ENST00000353319 NCAPD2Q15021 1401 aa13.47□□□□□ -0.25
PTPN2-203ENST00000353319 XIRP1Q702N8 1843 aaKnown RBP13.47□□□□□ -0.25
PTPN2-203ENST00000353319 XPCQ01831 940 aaPredicted RBP13.47□□□□□ -0.25
PTPN2-203ENST00000353319 MCM10Q7L590 875 aa13.47□□□□□ -0.25
PTPN2-203ENST00000353319 C8orf58Q8NAV2 365 aa13.47□□□□□ -0.25
PTPN2-203ENST00000353319 BABAM1Q9NWV8 329 aa13.47□□□□□ -0.25
PTPN2-203ENST00000353319 GNAT3A8MTJ3 354 aa13.46□□□□□ -0.25
PTPN2-203ENST00000353319 NBPF6Q5VWK0 638 aa13.46□□□□□ -0.25
PTPN2-203ENST00000353319 FTSJ3Q8IY81 847 aaKnown RBP13.46□□□□□ -0.25
PTPN2-203ENST00000353319 NBPF4Q96M43 638 aa13.46□□□□□ -0.25
PTPN2-203ENST00000353319 DDX19BQ9UMR2 479 aa13.45□□□□□ -0.26
PTPN2-203ENST00000353319 IGHDP01880 384 aa13.44□□□□□ -0.26
PTPN2-203ENST00000353319 LTV1Q96GA3 475 aaPredicted RBP13.44□□□□□ -0.26
PTPN2-203ENST00000353319 MAP3K5Q99683 1374 aa13.44□□□□□ -0.26
PTPN2-203ENST00000353319 MED1Q15648 1581 aaPredicted RBP13.43□□□□□ -0.26
PTPN2-203ENST00000353319 LRRC37A3O60309 1634 aa13.43□□□□□ -0.26
PTPN2-203ENST00000353319 PXDNQ92626 1479 aa13.43□□□□□ -0.26
PTPN2-203ENST00000353319 LMOD2Q6P5Q4 547 aa13.43□□□□□ -0.26
PTPN2-203ENST00000353319 CHMP4BQ9H444 224 aaKnown RBP13.43□□□□□ -0.26
PTPN2-203ENST00000353319 PCDHB15Q9Y5E8 787 aa13.43□□□□□ -0.26
PTPN2-203ENST00000353319 CAMTA1Q9Y6Y1 1673 aa13.42□□□□□ -0.26
PTPN2-203ENST00000353319 TNS3Q68CZ2 1445 aa13.42□□□□□ -0.26
PTPN2-203ENST00000353319 SOS1Q07889 1333 aaPredicted RBP13.42□□□□□ -0.26
PTPN2-203ENST00000353319 SPATA31A3Q5VYP0 1347 aa13.42□□□□□ -0.26
PTPN2-203ENST00000353319 IL17REQ8NFR9 667 aa13.42□□□□□ -0.26
PTPN2-203ENST00000353319 ELL2O00472 640 aaPredicted RBP13.41□□□□□ -0.26
PTPN2-203ENST00000353319 AMOTQ4VCS5 1084 aa13.41□□□□□ -0.26
PTPN2-203ENST00000353319 BRINP3Q76B58 766 aa13.41□□□□□ -0.26
PTPN2-203ENST00000353319 TMEM57Q8N5G2 664 aa13.41□□□□□ -0.26
PTPN2-203ENST00000353319 ANKRD24Q8TF21 1146 aa13.41□□□□□ -0.26
PTPN2-203ENST00000353319 API5Q9BZZ5 524 aaKnown RBP13.41□□□□□ -0.26
PTPN2-203ENST00000353319 RWDD1Q9H446 243 aaPredicted RBP13.41□□□□□ -0.26
PTPN2-203ENST00000353319 ABCC6O95255 1503 aa13.41□□□□□ -0.26
PTPN2-203ENST00000353319 ZNF335Q9H4Z2 1342 aaPredicted RBP13.4□□□□□ -0.26
PTPN2-203ENST00000353319 TAF7Q15545 349 aaPredicted RBP13.4□□□□□ -0.26
PTPN2-203ENST00000353319 PLEKHO1Q53GL0 409 aaPredicted RBP13.4□□□□□ -0.26
PTPN2-203ENST00000353319 ZBTB40Q9NUA8 1239 aa13.4□□□□□ -0.26
PTPN2-203ENST00000353319 SLAIN2Q9P270 581 aa13.4□□□□□ -0.26
PTPN2-203ENST00000353319 TSPYL4Q9UJ04 414 aa13.4□□□□□ -0.26
PTPN2-203ENST00000353319 AXIN2Q9Y2T1 843 aa13.4□□□□□ -0.26
PTPN2-203ENST00000353319 CEMIPQ8WUJ3 1361 aa13.4□□□□□ -0.26
PTPN2-203ENST00000353319 ABCC4O15439 1325 aa13.4□□□□□ -0.27
PTPN2-203ENST00000353319 HDAC1Q13547 482 aaPredicted RBP13.39□□□□□ -0.27
PTPN2-203ENST00000353319 ITPRIPQ8IWB1 547 aa13.39□□□□□ -0.27
PTPN2-203ENST00000353319 USHBP1Q8N6Y0 703 aa13.39□□□□□ -0.27
PTPN2-203ENST00000353319 DDX17Q92841 729 aaKnown RBP13.39□□□□□ -0.27
PTPN2-203ENST00000353319 PLEKHG2Q9H7P9 1386 aa13.39□□□□□ -0.27
PTPN2-203ENST00000353319 RGPD2P0DJD1 1756 aa13.39□□□□□ -0.27
PTPN2-203ENST00000353319 AKAP4Q5JQC9 854 aa13.39□□□□□ -0.27
PTPN2-203ENST00000353319 LRRC59Q96AG4 307 aaKnown RBP13.39□□□□□ -0.27
PTPN2-203ENST00000353319 CPDO75976 1380 aa13.38□□□□□ -0.27
PTPN2-203ENST00000353319 COL18A1P39060 1754 aa13.38□□□□□ -0.27
PTPN2-203ENST00000353319 ERBB3P21860 1342 aa13.38□□□□□ -0.27
PTPN2-203ENST00000353319 SOS2Q07890 1332 aaPredicted RBP13.38□□□□□ -0.27
PTPN2-203ENST00000353319 LMO7Q8WWI1 1683 aa13.38□□□□□ -0.27
PTPN2-203ENST00000353319 ZBTB7CA1YPR0 619 aa13.38□□□□□ -0.27
PTPN2-203ENST00000353319 ZBTB7BO15156 539 aaPredicted RBP13.38□□□□□ -0.27
PTPN2-203ENST00000353319 PDE4AP27815 886 aa13.38□□□□□ -0.27
PTPN2-203ENST00000353319 BACH2Q9BYV9 841 aa13.38□□□□□ -0.27
PTPN2-203ENST00000353319 CRYBG1Q9Y4K1 1723 aa13.37□□□□□ -0.27
PTPN2-203ENST00000353319 PTPRCP08575 1304 aa13.37□□□□□ -0.27
PTPN2-203ENST00000353319 ZC3H6P61129 1189 aaKnown RBP13.37□□□□□ -0.27
PTPN2-203ENST00000353319 KRT24Q2M2I5 525 aa13.37□□□□□ -0.27
PTPN2-203ENST00000353319 OVOS2A0A0G2JMS6 1433 aa13.36□□□□□ -0.27
PTPN2-203ENST00000353319 MIS18AQ9NYP9 233 aa13.36□□□□□ -0.27
PTPN2-203ENST00000353319 INTS3Q68E01 1043 aaKnown RBP13.35□□□□□ -0.27
PTPN2-203ENST00000353319 RGPD5Q99666 1765 aa13.35□□□□□ -0.27
PTPN2-203ENST00000353319 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.34□□□□□ -0.271e-6■■■□□ 16.3
PTPN2-203ENST00000353319 ZNF530Q6P9A1 599 aaPredicted RBP13.34□□□□□ -0.27
PTPN2-203ENST00000353319 SKAP1Q86WV1 359 aa13.34□□□□□ -0.27
PTPN2-203ENST00000353319 SMC5Q8IY18 1101 aa13.34□□□□□ -0.27
PTPN2-203ENST00000353319 CHMP4AQ9BY43 222 aa13.34□□□□□ -0.27
PTPN2-203ENST00000353319 SLC4A2P04920 1241 aa13.33□□□□□ -0.28
PTPN2-203ENST00000353319 C1orf141Q5JVX7 400 aa13.33□□□□□ -0.28
PTPN2-203ENST00000353319 CCDC30Q5VVM6 783 aa13.33□□□□□ -0.28
PTPN2-203ENST00000353319 LGR6Q9HBX8 967 aa13.33□□□□□ -0.28
PTPN2-203ENST00000353319 FAM208AQ9UK61 1670 aaKnown RBP13.33□□□□□ -0.28
PTPN2-203ENST00000353319 RGS12O14924 1447 aa13.32□□□□□ -0.28
PTPN2-203ENST00000353319 CACNA1FO60840 1977 aa13.32□□□□□ -0.28
PTPN2-203ENST00000353319 RNMTO43148 476 aaKnown RBP13.32□□□□□ -0.28
PTPN2-203ENST00000353319 HOXB7P09629 217 aa13.32□□□□□ -0.28
PTPN2-203ENST00000353319 CABLES1Q8TDN4 633 aa13.32□□□□□ -0.28
PTPN2-203ENST00000353319 ADAMTS7Q9UKP4 1686 aa13.31□□□□□ -0.28
PTPN2-203ENST00000353319 PLEKHG5O94827 1062 aa13.31□□□□□ -0.28
PTPN2-203ENST00000353319 FAM161AQ3B820 660 aa13.31□□□□□ -0.28
PTPN2-203ENST00000353319 PDZRN3Q9UPQ7 1066 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 1554 ms