RNA–Protein interactions for RNA: ENST00000351266.8

CNTFR-201, Transcript of ciliary neurotrophic factor receptor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTFR, Length 1,910 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTFR-201ENST00000351266 ABCC4O15439 1325 aa28.95■■■□□ 2.23
CNTFR-201ENST00000351266 RBM33Q96EV2 1170 aaKnown RBP28.94■■■□□ 2.22
CNTFR-201ENST00000351266 IP6K1Q92551 441 aa28.92■■■□□ 2.22
CNTFR-201ENST00000351266 NFAT5O94916 1531 aa28.92■■■□□ 2.22
CNTFR-201ENST00000351266 VIRMAQ69YN4 1812 aaKnown RBP28.91■■■□□ 2.22
CNTFR-201ENST00000351266 PROSER2Q86WR7 435 aaPredicted RBP28.9■■■□□ 2.22
CNTFR-201ENST00000351266 SMC5Q8IY18 1101 aa28.9■■■□□ 2.22
CNTFR-201ENST00000351266 ZBTB7BO15156 539 aaPredicted RBP28.9■■■□□ 2.22
CNTFR-201ENST00000351266 LTN1O94822 1766 aa28.89■■■□□ 2.22
CNTFR-201ENST00000351266 PHRF1Q9P1Y6 1649 aaKnown RBP28.88■■■□□ 2.21
CNTFR-201ENST00000351266 GNAT3A8MTJ3 354 aa28.87■■■□□ 2.21
CNTFR-201ENST00000351266 FOXO3O43524 673 aa28.86■■■□□ 2.21
CNTFR-201ENST00000351266 KIF1AQ12756 1690 aa28.86■■■□□ 2.21
CNTFR-201ENST00000351266 PTPRCP08575 1304 aa28.86■■■□□ 2.21
CNTFR-201ENST00000351266 C19orf44Q9H6X5 657 aa28.86■■■□□ 2.21
CNTFR-201ENST00000351266 TSPYL4Q9UJ04 414 aa28.86■■■□□ 2.21
CNTFR-201ENST00000351266 BABAM1Q9NWV8 329 aa28.85■■■□□ 2.21
CNTFR-201ENST00000351266 LRRC37A3O60309 1634 aa28.85■■■□□ 2.21
CNTFR-201ENST00000351266 MAP3K5Q99683 1374 aa28.84■■■□□ 2.21
CNTFR-201ENST00000351266 ORAI2Q96SN7 254 aa28.83■■■□□ 2.21
CNTFR-201ENST00000351266 SOS1Q07889 1333 aaPredicted RBP28.83■■■□□ 2.21
CNTFR-201ENST00000351266 LTV1Q96GA3 475 aaPredicted RBP28.82■■■□□ 2.2
CNTFR-201ENST00000351266 SLIT3O75094 1523 aa28.82■■■□□ 2.2
CNTFR-201ENST00000351266 NCOA3Q9Y6Q9 1424 aa28.82■■■□□ 2.2
CNTFR-201ENST00000351266 INTS3Q68E01 1043 aaKnown RBP28.81■■■□□ 2.2
CNTFR-201ENST00000351266 GCC1Q96CN9 775 aa28.81■■■□□ 2.2
CNTFR-201ENST00000351266 C1orf167Q5SNV9 1468 aa28.8■■■□□ 2.2
CNTFR-201ENST00000351266 KRT24Q2M2I5 525 aa28.78■■■□□ 2.2
CNTFR-201ENST00000351266 DCCP43146 1447 aa28.78■■■□□ 2.2
CNTFR-201ENST00000351266 MST1RQ04912 1400 aa28.78■■■□□ 2.2
CNTFR-201ENST00000351266 NUCB1Q02818 461 aa28.77■■■□□ 2.2
CNTFR-201ENST00000351266 GCP02774 474 aa28.77■■■□□ 2.2
CNTFR-201ENST00000351266 USP19O94966 1318 aa28.76■■■□□ 2.2
CNTFR-201ENST00000351266 TRPM3Q9HCF6 1732 aaPredicted RBP28.76■■■□□ 2.19
CNTFR-201ENST00000351266 KRT28Q7Z3Y7 464 aa28.76■■■□□ 2.19
CNTFR-201ENST00000351266 MSH6P52701 1360 aa28.76■■■□□ 2.19
CNTFR-201ENST00000351266 UPF2Q9HAU5 1272 aaKnown RBP28.75■■■□□ 2.19
CNTFR-201ENST00000351266 ARHGEF25Q86VW2 580 aa28.75■■■□□ 2.19
CNTFR-201ENST00000351266 TAF7Q15545 349 aaPredicted RBP28.74■■■□□ 2.19
CNTFR-201ENST00000351266 MIS18AQ9NYP9 233 aa28.74■■■□□ 2.19
CNTFR-201ENST00000351266 RGS12O14924 1447 aa28.74■■■□□ 2.19
CNTFR-201ENST00000351266 ATF3P18847 181 aa28.73■■■□□ 2.19
CNTFR-201ENST00000351266 SLC4A2P04920 1241 aa28.73■■■□□ 2.19
CNTFR-201ENST00000351266 NBPF6Q5VWK0 638 aa28.73■■■□□ 2.19
CNTFR-201ENST00000351266 NBPF4Q96M43 638 aa28.73■■■□□ 2.19
CNTFR-201ENST00000351266 DAXXQ9UER7 740 aaPredicted RBP28.73■■■□□ 2.19
CNTFR-201ENST00000351266 STK31Q9BXU1 1019 aa28.72■■■□□ 2.19
CNTFR-201ENST00000351266 CHD1LQ86WJ1 897 aa28.71■■■□□ 2.19
CNTFR-201ENST00000351266 IL17REQ8NFR9 667 aa28.71■■■□□ 2.19
CNTFR-201ENST00000351266 USHBP1Q8N6Y0 703 aa28.7■■■□□ 2.18
CNTFR-201ENST00000351266 TMEM94Q12767 1356 aa28.69■■■□□ 2.18
CNTFR-201ENST00000351266 CCDC30Q5VVM6 783 aa28.69■■■□□ 2.18
CNTFR-201ENST00000351266 NCAPD2Q15021 1401 aa28.69■■■□□ 2.18
CNTFR-201ENST00000351266 ZBTB7CA1YPR0 619 aa28.69■■■□□ 2.18
CNTFR-201ENST00000351266 XPCQ01831 940 aaPredicted RBP28.69■■■□□ 2.18
CNTFR-201ENST00000351266 CEMIPQ8WUJ3 1361 aa28.68■■■□□ 2.18
CNTFR-201ENST00000351266 AMOTQ4VCS5 1084 aa28.68■■■□□ 2.18
CNTFR-201ENST00000351266 LMOD2Q6P5Q4 547 aa28.68■■■□□ 2.18
CNTFR-201ENST00000351266 C1orf115Q9H7X2 142 aa28.68■■■□□ 2.18
CNTFR-201ENST00000351266 PLEKHO1Q53GL0 409 aaPredicted RBP28.67■■■□□ 2.18
CNTFR-201ENST00000351266 CHMP4AQ9BY43 222 aa28.67■■■□□ 2.18
CNTFR-201ENST00000351266 RPAP2Q8IXW5 612 aaPredicted RBP28.66■■■□□ 2.18
CNTFR-201ENST00000351266 CCT4P50991 539 aaKnown RBP28.65■■■□□ 2.18
CNTFR-201ENST00000351266 AKAP4Q5JQC9 854 aa28.64■■■□□ 2.18
CNTFR-201ENST00000351266 CADPS2Q86UW7 1296 aa28.64■■■□□ 2.18
CNTFR-201ENST00000351266 SIRT2Q8IXJ6 389 aa28.64■■■□□ 2.18
CNTFR-201ENST00000351266 LNPKQ9C0E8 428 aa28.63■■■□□ 2.17
CNTFR-201ENST00000351266 ALS2Q96Q42 1657 aa28.63■■■□□ 2.17
CNTFR-201ENST00000351266 MED1Q15648 1581 aaPredicted RBP28.63■■■□□ 2.17
CNTFR-201ENST00000351266 SEC24BO95487 1268 aa28.63■■■□□ 2.17
CNTFR-201ENST00000351266 ANKRD45Q5TZF3 282 aa28.63■■■□□ 2.17
CNTFR-201ENST00000351266 ANKRD24Q8TF21 1146 aa28.63■■■□□ 2.17
CNTFR-201ENST00000351266 CAMTA1Q9Y6Y1 1673 aa28.62■■■□□ 2.17
CNTFR-201ENST00000351266 ANKRD44Q8N8A2 993 aa28.61■■■□□ 2.17
CNTFR-201ENST00000351266 LMO7Q8WWI1 1683 aa28.61■■■□□ 2.17
CNTFR-201ENST00000351266 FAM208AQ9UK61 1670 aaKnown RBP28.6■■■□□ 2.17
CNTFR-201ENST00000351266 OVOS2A0A0G2JMS6 1433 aa28.6■■■□□ 2.17
CNTFR-201ENST00000351266 LRRC59Q96AG4 307 aaKnown RBP28.6■■■□□ 2.17
CNTFR-201ENST00000351266 HOXB7P09629 217 aa28.59■■■□□ 2.17
CNTFR-201ENST00000351266 STRCP1A6NGW2 1772 aa28.59■■■□□ 2.17
CNTFR-201ENST00000351266 ZNF530Q6P9A1 599 aaPredicted RBP28.59■■■□□ 2.17
CNTFR-201ENST00000351266 DCTPP1Q9H773 170 aa28.59■■■□□ 2.17
CNTFR-201ENST00000351266 NPHP3Q7Z494 1330 aa28.58■■■□□ 2.17
CNTFR-201ENST00000351266 TBC1D32Q96NH3 1257 aa28.58■■■□□ 2.17
CNTFR-201ENST00000351266 ATP10DQ9P241 1426 aa28.58■■■□□ 2.17
CNTFR-201ENST00000351266 CACNA1FO60840 1977 aa28.58■■■□□ 2.17
CNTFR-201ENST00000351266 BMP2KLQ5H9B9 411 aa28.57■■■□□ 2.16
CNTFR-201ENST00000351266 RGPD2P0DJD1 1756 aa28.57■■■□□ 2.16
CNTFR-201ENST00000351266 FLIIQ13045 1269 aa28.57■■■□□ 2.16
CNTFR-201ENST00000351266 C1orf141Q5JVX7 400 aa28.57■■■□□ 2.16
CNTFR-201ENST00000351266 G2E3Q7L622 706 aa28.57■■■□□ 2.16
CNTFR-201ENST00000351266 LMTK3Q96Q04 1460 aa28.56■■■□□ 2.16
CNTFR-201ENST00000351266 TEFQ10587 303 aa28.55■■■□□ 2.16
CNTFR-201ENST00000351266 BECN1Q14457 450 aa28.55■■■□□ 2.16
CNTFR-201ENST00000351266 CEP85Q6P2H3 762 aa28.55■■■□□ 2.16
CNTFR-201ENST00000351266 HMMRO75330 724 aa28.54■■■□□ 2.16
CNTFR-201ENST00000351266 PXDNLA1KZ92 1463 aa28.53■■■□□ 2.16
CNTFR-201ENST00000351266 MEIS3Q99687 375 aa28.53■■■□□ 2.16
CNTFR-201ENST00000351266 FKBP5Q13451 457 aaPredicted RBP28.53■■■□□ 2.16
CNTFR-201ENST00000351266 SLC4A10Q6U841 1118 aa28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms