RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 GGNBP2Q9H3C7 697 aa17.32■□□□□ 0.36
RLIM-202ENST00000349225 VWDEQ8N2E2 1590 aa17.32■□□□□ 0.36
RLIM-202ENST00000349225 SETBP1Q9Y6X0 1596 aa17.32■□□□□ 0.36
RLIM-202ENST00000349225 NEK4P51957 841 aa17.32■□□□□ 0.36
RLIM-202ENST00000349225 BCL11BQ9C0K0 894 aaPredicted RBP17.32■□□□□ 0.36
RLIM-202ENST00000349225 ARHGAP45Q92619 1136 aa17.31■□□□□ 0.36
RLIM-202ENST00000349225 NAP1L2Q9ULW6 460 aaPredicted RBP17.31■□□□□ 0.36
RLIM-202ENST00000349225 CUL4AQ13619 759 aa17.31■□□□□ 0.36
RLIM-202ENST00000349225 UVSSAQ2YD98 709 aa17.31■□□□□ 0.36
RLIM-202ENST00000349225 NCBP1Q09161 790 aaKnown RBP17.3■□□□□ 0.36
RLIM-202ENST00000349225 NOL8Q76FK4 1167 aaKnown RBP17.3■□□□□ 0.36
RLIM-202ENST00000349225 PALD1Q9ULE6 856 aa17.3■□□□□ 0.36
RLIM-202ENST00000349225 PLCH2O75038 1416 aa17.3■□□□□ 0.36
RLIM-202ENST00000349225 ATP10DQ9P241 1426 aa17.3■□□□□ 0.36
RLIM-202ENST00000349225 NSD2O96028 1365 aa17.3■□□□□ 0.36
RLIM-202ENST00000349225 AFAP1Q8N556 730 aa17.3■□□□□ 0.36
RLIM-202ENST00000349225 LRRC7Q96NW7 1537 aa17.3■□□□□ 0.36
RLIM-202ENST00000349225 YEATS2Q9ULM3 1422 aa17.29■□□□□ 0.36
RLIM-202ENST00000349225 NAA30Q147X3 362 aaPredicted RBP17.29■□□□□ 0.36
RLIM-202ENST00000349225 TPRNQ4KMQ1 711 aa17.29■□□□□ 0.36
RLIM-202ENST00000349225 APBB1O00213 710 aa17.29■□□□□ 0.36
RLIM-202ENST00000349225 KDM4AO75164 1064 aa17.29■□□□□ 0.36
RLIM-202ENST00000349225 ZFYVE16Q7Z3T8 1539 aa17.28■□□□□ 0.36
RLIM-202ENST00000349225 FAM184AQ8NB25 1140 aa17.28■□□□□ 0.36
RLIM-202ENST00000349225 CABP2Q9NPB3 220 aa17.28■□□□□ 0.36
RLIM-202ENST00000349225 SPAG9O60271 1321 aaKnown RBP17.28■□□□□ 0.36
RLIM-202ENST00000349225 SLFN14P0C7P3 912 aa17.27■□□□□ 0.36
RLIM-202ENST00000349225 CTNNA3Q9UI47 895 aa17.27■□□□□ 0.36
RLIM-202ENST00000349225 A0A1W2PP64 1363 aa17.27■□□□□ 0.36
RLIM-202ENST00000349225 SYAP1Q96A49 352 aaPredicted RBP17.27■□□□□ 0.36
RLIM-202ENST00000349225 PHACTR3Q96KR7 559 aa17.27■□□□□ 0.35
RLIM-202ENST00000349225 FUCA2Q9BTY2 467 aa17.27■□□□□ 0.35
RLIM-202ENST00000349225 GLI2P10070 1586 aa17.26■□□□□ 0.35
RLIM-202ENST00000349225 ZNF771Q7L3S4 317 aaPredicted RBP17.26■□□□□ 0.35
RLIM-202ENST00000349225 MROH1Q8NDA8 1641 aa17.26■□□□□ 0.35
RLIM-202ENST00000349225 ARHGEF40Q8TER5 1519 aa17.26■□□□□ 0.35
RLIM-202ENST00000349225 ERC2O15083 957 aa17.26■□□□□ 0.35
RLIM-202ENST00000349225 OGFRQ9NZT2 677 aa17.26■□□□□ 0.35
RLIM-202ENST00000349225 ZNF428Q96B54 188 aa17.25■□□□□ 0.35
RLIM-202ENST00000349225 REC8O95072 547 aa17.25■□□□□ 0.35
RLIM-202ENST00000349225 KRT24Q2M2I5 525 aa17.25■□□□□ 0.35
RLIM-202ENST00000349225 C8orf58Q8NAV2 365 aa17.25■□□□□ 0.35
RLIM-202ENST00000349225 FEZ1Q99689 392 aa17.25■□□□□ 0.35
RLIM-202ENST00000349225 C14orf93Q9H972 538 aaKnown RBP17.25■□□□□ 0.35
RLIM-202ENST00000349225 MBIPQ9NS73 344 aa17.25■□□□□ 0.35
RLIM-202ENST00000349225 RPAP1Q9BWH6 1393 aaPredicted RBP17.25■□□□□ 0.35
RLIM-202ENST00000349225 FBLN1P23142 703 aa17.24■□□□□ 0.35
RLIM-202ENST00000349225 CNPY2Q9Y2B0 182 aa17.24■□□□□ 0.35
RLIM-202ENST00000349225 PHF14O94880 888 aa17.24■□□□□ 0.35
RLIM-202ENST00000349225 CCDC183Q5T5S1 534 aa17.24■□□□□ 0.35
RLIM-202ENST00000349225 SPC24Q8NBT2 197 aa17.24■□□□□ 0.35
RLIM-202ENST00000349225 SRCIN1Q9C0H9 1055 aa17.24■□□□□ 0.35
RLIM-202ENST00000349225 PRKAR2BP31323 418 aa17.23■□□□□ 0.35
RLIM-202ENST00000349225 IRX5P78411 483 aaPredicted RBP17.23■□□□□ 0.35
RLIM-202ENST00000349225 PLCB2Q00722 1185 aa17.23■□□□□ 0.35
RLIM-202ENST00000349225 ANKRD44Q8N8A2 993 aa17.23■□□□□ 0.35
RLIM-202ENST00000349225 DIAPH3Q9NSV4 1193 aa17.23■□□□□ 0.35
RLIM-202ENST00000349225 RTL1A6NKG5 1358 aa17.23■□□□□ 0.35
RLIM-202ENST00000349225 FYB1O15117 783 aa17.23■□□□□ 0.35
RLIM-202ENST00000349225 MX1P20591 662 aa17.23■□□□□ 0.35
RLIM-202ENST00000349225 FAM135BQ49AJ0 1406 aa17.23■□□□□ 0.35
RLIM-202ENST00000349225 TSHZ3Q63HK5 1081 aa17.23■□□□□ 0.35
RLIM-202ENST00000349225 CEP85Q6P2H3 762 aa17.23■□□□□ 0.35
RLIM-202ENST00000349225 PNPLA6Q8IY17 1366 aa17.23■□□□□ 0.35
RLIM-202ENST00000349225 DIAPH1O60610 1272 aaKnown RBP17.22■□□□□ 0.35
RLIM-202ENST00000349225 GIMAP6Q6P9H5 292 aa17.22■□□□□ 0.35
RLIM-202ENST00000349225 CFAP44Q96MT7 982 aa17.22■□□□□ 0.35
RLIM-202ENST00000349225 RIMBP3CA6NJZ7 1639 aa17.22■□□□□ 0.35
RLIM-202ENST00000349225 RIMBP3BA6NNM3 1639 aa17.22■□□□□ 0.35
RLIM-202ENST00000349225 RIMBP3Q9UFD9 1639 aa17.22■□□□□ 0.35
RLIM-202ENST00000349225 TMEM87AQ8NBN3 555 aa17.22■□□□□ 0.35
RLIM-202ENST00000349225 INTS4Q96HW7 963 aaKnown RBP17.22■□□□□ 0.35
RLIM-202ENST00000349225 ADGRB3O60242 1522 aa17.22■□□□□ 0.35
RLIM-202ENST00000349225 DDX41Q9UJV9 622 aaKnown RBP17.22■□□□□ 0.35
RLIM-202ENST00000349225 TUBGCP6Q96RT7 1819 aa17.22■□□□□ 0.35
RLIM-202ENST00000349225 PPLO60437 1756 aa17.21■□□□□ 0.35
RLIM-202ENST00000349225 RGS12O14924 1447 aa17.21■□□□□ 0.35
RLIM-202ENST00000349225 ARHGEF28Q8N1W1 1705 aaKnown RBP17.21■□□□□ 0.35
RLIM-202ENST00000349225 ZNF853P0CG23 659 aa17.21■□□□□ 0.35
RLIM-202ENST00000349225 TWISTNBQ3B726 338 aaPredicted RBP17.21■□□□□ 0.35
RLIM-202ENST00000349225 UPF3BQ9BZI7 483 aaKnown RBP17.21■□□□□ 0.35
RLIM-202ENST00000349225 KIF3BO15066 747 aa17.2■□□□□ 0.34
RLIM-202ENST00000349225 TAF3Q5VWG9 929 aa17.2■□□□□ 0.34
RLIM-202ENST00000349225 CASC1Q6TDU7 716 aa17.2■□□□□ 0.34
RLIM-202ENST00000349225 ANKRD26Q9UPS8 1709 aa17.2■□□□□ 0.34
RLIM-202ENST00000349225 DTNBO60941 627 aa17.19■□□□□ 0.34
RLIM-202ENST00000349225 SAFB2Q14151 953 aaKnown RBP eCLIP17.19■□□□□ 0.34
RLIM-202ENST00000349225 PTGS1P23219 599 aa17.19■□□□□ 0.34
RLIM-202ENST00000349225 EFCAB2Q5VUJ9 269 aa17.19■□□□□ 0.34
RLIM-202ENST00000349225 EVC2Q86UK5 1308 aa17.19■□□□□ 0.34
RLIM-202ENST00000349225 GABPB1Q06547 395 aaPredicted RBP17.19■□□□□ 0.34
RLIM-202ENST00000349225 LRMPQ12912 555 aa17.19■□□□□ 0.34
RLIM-202ENST00000349225 IPO4Q8TEX9 1081 aaKnown RBP17.19■□□□□ 0.34
RLIM-202ENST00000349225 IL25Q9H293 177 aa17.19■□□□□ 0.34
RLIM-202ENST00000349225 CAMSAP1Q5T5Y3 1602 aa17.18■□□□□ 0.34
RLIM-202ENST00000349225 CD163L1Q9NR16 1453 aa17.18■□□□□ 0.34
RLIM-202ENST00000349225 FCHSD2O94868 740 aa17.18■□□□□ 0.34
RLIM-202ENST00000349225 HMOX1P09601 288 aa17.18■□□□□ 0.34
RLIM-202ENST00000349225 CHAF1AQ13111 956 aaPredicted RBP17.18■□□□□ 0.34
RLIM-202ENST00000349225 CDC42BPGQ6DT37 1551 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms