RNA–Protein interactions for RNA: ENST00000340677.9

CDK11B-201, Transcript of cyclin dependent kinase 11B, humanhuman

TSL 1 (best) BASIC

Gene CDK11B, Length 2,534 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11B-201ENST00000340677 ZNF710Q8N1W2 664 aa20.85■□□□□ 0.93
CDK11B-201ENST00000340677 TBX22Q9Y458 520 aa20.85■□□□□ 0.93
CDK11B-201ENST00000340677 SPDYE4A6NLX3 237 aa20.85■□□□□ 0.93
CDK11B-201ENST00000340677 LMTK3Q96Q04 1460 aa20.84■□□□□ 0.93
CDK11B-201ENST00000340677 RNF123Q5XPI4 1314 aa20.84■□□□□ 0.93
CDK11B-201ENST00000340677 KIF16BQ96L93 1317 aa20.84■□□□□ 0.93
CDK11B-201ENST00000340677 TNNT3P45378 269 aaPredicted RBP20.84■□□□□ 0.93
CDK11B-201ENST00000340677 NOP2P46087 812 aaKnown RBP20.84■□□□□ 0.93
CDK11B-201ENST00000340677 PIK3R4Q99570 1358 aa20.84■□□□□ 0.93
CDK11B-201ENST00000340677 XRN1Q8IZH2 1706 aaKnown RBP20.83■□□□□ 0.93
CDK11B-201ENST00000340677 DNAJC14Q6Y2X3 702 aaPredicted RBP20.83■□□□□ 0.92
CDK11B-201ENST00000340677 DNAJC21Q5F1R6 531 aaKnown RBP20.82■□□□□ 0.92
CDK11B-201ENST00000340677 NLRP13Q86W25 1043 aa20.82■□□□□ 0.92
CDK11B-201ENST00000340677 SSR1P43307 286 aaKnown RBP20.81■□□□□ 0.92
CDK11B-201ENST00000340677 CCDC96Q2M329 555 aa20.81■□□□□ 0.92
CDK11B-201ENST00000340677 ANKRD36BQ8N2N9 1353 aa20.81■□□□□ 0.92
CDK11B-201ENST00000340677 ISY1Q9ULR0 285 aaKnown RBP20.81■□□□□ 0.92
CDK11B-201ENST00000340677 PTCH1Q13635 1447 aa20.81■□□□□ 0.92
CDK11B-201ENST00000340677 DONSONQ9NYP3 566 aa20.79■□□□□ 0.92
CDK11B-201ENST00000340677 INSRP06213 1382 aa20.78■□□□□ 0.92
CDK11B-201ENST00000340677 ZKSCAN8Q15776 578 aaPredicted RBP20.78■□□□□ 0.92
CDK11B-201ENST00000340677 CASC1Q6TDU7 716 aa20.78■□□□□ 0.92
CDK11B-201ENST00000340677 CALCOCO1Q9P1Z2 691 aa20.78■□□□□ 0.92
CDK11B-201ENST00000340677 CT47B1P0C2W7 299 aaPredicted RBP20.77■□□□□ 0.92
CDK11B-201ENST00000340677 MFAP1P55081 439 aaKnown RBP20.77■□□□□ 0.92
CDK11B-201ENST00000340677 XPCQ01831 940 aaPredicted RBP20.77■□□□□ 0.92
CDK11B-201ENST00000340677 MINK1Q8N4C8 1332 aaPredicted RBP20.77■□□□□ 0.92
CDK11B-201ENST00000340677 NSD2O96028 1365 aa20.77■□□□□ 0.91
CDK11B-201ENST00000340677 PLEKHH1Q9ULM0 1364 aa20.77■□□□□ 0.91
CDK11B-201ENST00000340677 CHD2O14647 1828 aaKnown RBP20.76■□□□□ 0.91
CDK11B-201ENST00000340677 ANKRD26Q9UPS8 1709 aa20.76■□□□□ 0.91
CDK11B-201ENST00000340677 PTPRUQ92729 1446 aa20.76■□□□□ 0.91
CDK11B-201ENST00000340677 TNNT1P13805 278 aa20.76■□□□□ 0.91
CDK11B-201ENST00000340677 RSPH14Q9UHP6 348 aa20.76■□□□□ 0.91
CDK11B-201ENST00000340677 ATP7BP35670 1465 aa20.75■□□□□ 0.91
CDK11B-201ENST00000340677 GABPB1Q06547 395 aaPredicted RBP20.75■□□□□ 0.91
CDK11B-201ENST00000340677 CARD14Q9BXL6 1004 aa20.75■□□□□ 0.91
CDK11B-201ENST00000340677 BECN1Q14457 450 aa20.75■□□□□ 0.91
CDK11B-201ENST00000340677 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.75■□□□□ 0.91
CDK11B-201ENST00000340677 DHX16O60231 1041 aaKnown RBP20.74■□□□□ 0.91
CDK11B-201ENST00000340677 ANKLE2Q86XL3 938 aa20.74■□□□□ 0.91
CDK11B-201ENST00000340677 BSDC1Q9NW68 430 aaPredicted RBP20.74■□□□□ 0.91
CDK11B-201ENST00000340677 NSD3Q9BZ95 1437 aa20.74■□□□□ 0.91
CDK11B-201ENST00000340677 TDO2P48775 406 aa20.74■□□□□ 0.91
CDK11B-201ENST00000340677 CCDC173Q0VFZ6 552 aa20.74■□□□□ 0.91
CDK11B-201ENST00000340677 SAFB2Q14151 953 aaKnown RBP eCLIP20.74■□□□□ 0.918e-9■■■■□ 22.1
CDK11B-201ENST00000340677 SLC12A5Q9H2X9 1139 aa20.74■□□□□ 0.91
CDK11B-201ENST00000340677 CABP2Q9NPB3 220 aa20.74■□□□□ 0.91
CDK11B-201ENST00000340677 ROBO2Q9HCK4 1378 aa20.74■□□□□ 0.91
CDK11B-201ENST00000340677 SLFN14P0C7P3 912 aa20.73■□□□□ 0.91
CDK11B-201ENST00000340677 ZNF853P0CG23 659 aa20.73■□□□□ 0.91
CDK11B-201ENST00000340677 SRPK2P78362 688 aaKnown RBP20.73■□□□□ 0.91
CDK11B-201ENST00000340677 ARMCX6Q7L4S7 300 aa20.73■□□□□ 0.91
CDK11B-201ENST00000340677 PNISRQ8TF01 805 aaKnown RBP20.73■□□□□ 0.91
CDK11B-201ENST00000340677 PPP1R9BQ96SB3 815 aa20.73■□□□□ 0.91
CDK11B-201ENST00000340677 CDK19Q9BWU1 502 aa20.73■□□□□ 0.91
CDK11B-201ENST00000340677 ICE2Q659A1 982 aa20.73■□□□□ 0.91
CDK11B-201ENST00000340677 TRERF1Q96PN7 1200 aa20.73■□□□□ 0.91
CDK11B-201ENST00000340677 TMX1Q9H3N1 280 aa20.73■□□□□ 0.91
CDK11B-201ENST00000340677 SENP3Q9H4L4 574 aaPredicted RBP20.73■□□□□ 0.91
CDK11B-201ENST00000340677 SMG6Q86US8 1419 aaKnown RBP20.72■□□□□ 0.91
CDK11B-201ENST00000340677 CCDC189A1A4V9 331 aa20.72■□□□□ 0.91
CDK11B-201ENST00000340677 WAPLQ7Z5K2 1190 aa20.72■□□□□ 0.91
CDK11B-201ENST00000340677 JARID2Q92833 1246 aaPredicted RBP20.72■□□□□ 0.91
CDK11B-201ENST00000340677 SPINK5Q9NQ38 1064 aaPredicted RBP20.72■□□□□ 0.91
CDK11B-201ENST00000340677 CSPP1Q1MSJ5 1256 aa20.72■□□□□ 0.91
CDK11B-201ENST00000340677 NUDCQ9Y266 331 aa20.72■□□□□ 0.91
CDK11B-201ENST00000340677 CD163L1Q9NR16 1453 aa20.72■□□□□ 0.91
CDK11B-201ENST00000340677 TOPAZ1Q8N9V7 1692 aa20.71■□□□□ 0.91
CDK11B-201ENST00000340677 WASLO00401 505 aaPredicted RBP20.71■□□□□ 0.91
CDK11B-201ENST00000340677 AKAP12Q02952 1782 aa20.7■□□□□ 0.9
CDK11B-201ENST00000340677 RBM28Q9NW13 759 aaKnown RBP20.7■□□□□ 0.9
CDK11B-201ENST00000340677 MRVI1Q9Y6F6 885 aa20.7■□□□□ 0.9
CDK11B-201ENST00000340677 KIF20BQ96Q89 1820 aa20.7■□□□□ 0.9
CDK11B-201ENST00000340677 ZNF428Q96B54 188 aa20.7■□□□□ 0.9
CDK11B-201ENST00000340677 CGNL1Q0VF96 1302 aa20.69■□□□□ 0.9
CDK11B-201ENST00000340677 GUCY2CP25092 1073 aa20.69■□□□□ 0.9
CDK11B-201ENST00000340677 MYRIPQ8NFW9 859 aa20.69■□□□□ 0.9
CDK11B-201ENST00000340677 KDM4AO75164 1064 aa20.69■□□□□ 0.9
CDK11B-201ENST00000340677 RINLQ6ZS11 566 aa20.69■□□□□ 0.9
CDK11B-201ENST00000340677 TSC1Q92574 1164 aa20.69■□□□□ 0.9
CDK11B-201ENST00000340677 A0A1W2PP64 1363 aa20.69■□□□□ 0.9
CDK11B-201ENST00000340677 ITSN1Q15811 1721 aa20.68■□□□□ 0.9
CDK11B-201ENST00000340677 MON2Q7Z3U7 1717 aa20.68■□□□□ 0.9
CDK11B-201ENST00000340677 SLC26A8Q96RN1 970 aa20.68■□□□□ 0.9
CDK11B-201ENST00000340677 PPP2R1AP30153 589 aa20.68■□□□□ 0.9
CDK11B-201ENST00000340677 ITFG2Q969R8 447 aa20.68■□□□□ 0.9
CDK11B-201ENST00000340677 CDC42BPGQ6DT37 1551 aa20.68■□□□□ 0.9
CDK11B-201ENST00000340677 IPO8O15397 1037 aaKnown RBP20.67■□□□□ 0.9
CDK11B-201ENST00000340677 TRAK2O60296 914 aa20.67■□□□□ 0.9
CDK11B-201ENST00000340677 BRMS1Q9HCU9 246 aa20.67■□□□□ 0.9
CDK11B-201ENST00000340677 AMOTL2Q9Y2J4 779 aa20.67■□□□□ 0.9
CDK11B-201ENST00000340677 MPHOSPH10O00566 681 aaKnown RBP20.66■□□□□ 0.9
CDK11B-201ENST00000340677 CTR9Q6PD62 1173 aa20.66■□□□□ 0.9
CDK11B-201ENST00000340677 NPHP4O75161 1426 aaPredicted RBP20.66■□□□□ 0.9
CDK11B-201ENST00000340677 KIF1CO43896 1103 aaKnown RBP20.66■□□□□ 0.9
CDK11B-201ENST00000340677 ZC3H12AQ5D1E8 599 aaKnown RBP20.66■□□□□ 0.9
CDK11B-201ENST00000340677 MTA1Q13330 715 aa20.65■□□□□ 0.9
CDK11B-201ENST00000340677 TSHZ1Q6ZSZ6 1077 aa20.65■□□□□ 0.9
CDK11B-201ENST00000340677 HDGFL2Q7Z4V5 671 aaPredicted RBP20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 250.7 ms