RNA–Protein interactions for RNA: ENST00000339490.7

PHKA1-201, Transcript of phosphorylase kinase regulatory subunit alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PHKA1, Length 6,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHKA1-201ENST00000339490 CCDC112Q8NEF3 446 aa20.51■□□□□ 0.87
PHKA1-201ENST00000339490 NUP62CLQ9H1M0 184 aa20.51■□□□□ 0.87
PHKA1-201ENST00000339490 ATAD2Q6PL18 1390 aa20.51■□□□□ 0.87
PHKA1-201ENST00000339490 SMARCA5O60264 1052 aaPredicted RBP20.51■□□□□ 0.87
PHKA1-201ENST00000339490 SOGA3Q5TF21 947 aa20.51■□□□□ 0.87
PHKA1-201ENST00000339490 RDXP35241 583 aaKnown RBP20.5■□□□□ 0.87
PHKA1-201ENST00000339490 MCM10Q7L590 875 aa20.5■□□□□ 0.87
PHKA1-201ENST00000339490 DDX11Q96FC9 970 aa20.5■□□□□ 0.87
PHKA1-201ENST00000339490 PHF23Q9BUL5 403 aaPredicted RBP20.5■□□□□ 0.87
PHKA1-201ENST00000339490 PIBF1Q8WXW3 757 aa20.5■□□□□ 0.87
PHKA1-201ENST00000339490 SKAP1Q86WV1 359 aa20.5■□□□□ 0.87
PHKA1-201ENST00000339490 NOL7Q9UMY1 257 aaKnown RBP20.5■□□□□ 0.87
PHKA1-201ENST00000339490 CFAP45Q9UL16 551 aa20.49■□□□□ 0.87
PHKA1-201ENST00000339490 GNAT3A8MTJ3 354 aa20.49■□□□□ 0.87
PHKA1-201ENST00000339490 TIAM1Q13009 1591 aa20.49■□□□□ 0.87
PHKA1-201ENST00000339490 CDKL5O76039 1030 aa20.49■□□□□ 0.87
PHKA1-201ENST00000339490 UBAC1Q9BSL1 405 aa20.49■□□□□ 0.87
PHKA1-201ENST00000339490 CTNNA3Q9UI47 895 aa20.49■□□□□ 0.87
PHKA1-201ENST00000339490 CIZ1Q9ULV3 898 aaPredicted RBP20.49■□□□□ 0.87
PHKA1-201ENST00000339490 RAI14Q9P0K7 980 aa20.48■□□□□ 0.87
PHKA1-201ENST00000339490 PPP6R1Q9UPN7 881 aa20.48■□□□□ 0.87
PHKA1-201ENST00000339490 HECW1Q76N89 1606 aa20.48■□□□□ 0.87
PHKA1-201ENST00000339490 DUSP27Q5VZP5 1158 aa20.48■□□□□ 0.87
PHKA1-201ENST00000339490 RPGRIP1LQ68CZ1 1315 aa20.47■□□□□ 0.87
PHKA1-201ENST00000339490 CBFA2T2O43439 604 aa20.47■□□□□ 0.87
PHKA1-201ENST00000339490 RBM5P52756 815 aaKnown RBP eCLIP20.47■□□□□ 0.87
PHKA1-201ENST00000339490 CCDC181Q5TID7 509 aa20.47■□□□□ 0.87
PHKA1-201ENST00000339490 NUDT16Q96DE0 195 aaKnown RBP20.47■□□□□ 0.87
PHKA1-201ENST00000339490 IDH1O75874 414 aaKnown RBP20.47■□□□□ 0.87
PHKA1-201ENST00000339490 C20orf194Q5TEA3 1177 aa20.47■□□□□ 0.87
PHKA1-201ENST00000339490 LEKR1Q6ZMV7 388 aa20.47■□□□□ 0.87
PHKA1-201ENST00000339490 FILIP1Q7Z7B0 1213 aa20.47■□□□□ 0.87
PHKA1-201ENST00000339490 PDCL3Q9H2J4 239 aa20.47■□□□□ 0.87
PHKA1-201ENST00000339490 PRDM11Q9NQV5 511 aa20.47■□□□□ 0.87
PHKA1-201ENST00000339490 PPP1R1BQ9UD71 204 aaPredicted RBP20.47■□□□□ 0.87
PHKA1-201ENST00000339490 KRT32Q14532 448 aa20.47■□□□□ 0.87
PHKA1-201ENST00000339490 ZC3H6P61129 1189 aaKnown RBP20.46■□□□□ 0.87
PHKA1-201ENST00000339490 AEBP2Q6ZN18 517 aaPredicted RBP20.46■□□□□ 0.87
PHKA1-201ENST00000339490 SSBP05455 408 aaKnown RBP eCLIP20.46■□□□□ 0.87
PHKA1-201ENST00000339490 CAMK4Q16566 473 aa20.46■□□□□ 0.87
PHKA1-201ENST00000339490 CEP57L1Q8IYX8 460 aa20.46■□□□□ 0.87
PHKA1-201ENST00000339490 TSPYL1Q9H0U9 437 aa20.46■□□□□ 0.87
PHKA1-201ENST00000339490 SYCE3A1L190 88 aa20.46■□□□□ 0.87
PHKA1-201ENST00000339490 UPF3BQ9BZI7 483 aaKnown RBP20.46■□□□□ 0.87
PHKA1-201ENST00000339490 UQCRHLA0A096LP55 91 aa20.46■□□□□ 0.87
PHKA1-201ENST00000339490 UQCRHP07919 91 aa20.46■□□□□ 0.87
PHKA1-201ENST00000339490 LRP2BPQ9P2M1 347 aa20.46■□□□□ 0.87
PHKA1-201ENST00000339490 NESP48681 1621 aa20.45■□□□□ 0.86
PHKA1-201ENST00000339490 BICDL1Q6ZP65 573 aa20.45■□□□□ 0.86
PHKA1-201ENST00000339490 CCDC66A2RUB6 948 aa20.45■□□□□ 0.86
PHKA1-201ENST00000339490 FERMT3Q86UX7 667 aa20.45■□□□□ 0.86
PHKA1-201ENST00000339490 DHX8Q14562 1220 aaKnown RBP20.45■□□□□ 0.86
PHKA1-201ENST00000339490 CCDC83Q8IWF9 413 aa20.45■□□□□ 0.86
PHKA1-201ENST00000339490 CCDC191Q8NCU4 936 aa20.45■□□□□ 0.86
PHKA1-201ENST00000339490 SUPT6HQ7KZ85 1726 aaKnown RBP20.44■□□□□ 0.86
PHKA1-201ENST00000339490 MX1P20591 662 aa20.44■□□□□ 0.86
PHKA1-201ENST00000339490 WWC2Q6AWC2 1192 aa20.44■□□□□ 0.86
PHKA1-201ENST00000339490 PRPF40BQ6NWY9 871 aaKnown RBP20.43■□□□□ 0.86
PHKA1-201ENST00000339490 WAPLQ7Z5K2 1190 aa20.43■□□□□ 0.86
PHKA1-201ENST00000339490 SSH1Q8WYL5 1049 aa20.43■□□□□ 0.86
PHKA1-201ENST00000339490 LUC7LQ9NQ29 371 aaKnown RBP20.43■□□□□ 0.86
PHKA1-201ENST00000339490 IMMTQ16891 758 aaKnown RBP20.43■□□□□ 0.86
PHKA1-201ENST00000339490 KRI1Q8N9T8 703 aaKnown RBP20.43■□□□□ 0.86
PHKA1-201ENST00000339490 ERLIN2O94905 339 aa20.43■□□□□ 0.86
PHKA1-201ENST00000339490 AIDAQ96BJ3 306 aa20.42■□□□□ 0.86
PHKA1-201ENST00000339490 KIF1BPQ96EK5 621 aa20.42■□□□□ 0.86
PHKA1-201ENST00000339490 PRXQ9BXM0 1461 aa20.42■□□□□ 0.86
PHKA1-201ENST00000339490 RARSP54136 660 aaKnown RBP20.42■□□□□ 0.86
PHKA1-201ENST00000339490 ANKLE2Q86XL3 938 aa20.42■□□□□ 0.86
PHKA1-201ENST00000339490 NEFHP12036 1026 aa20.41■□□□□ 0.86
PHKA1-201ENST00000339490 MAP3K11Q16584 847 aa20.41■□□□□ 0.86
PHKA1-201ENST00000339490 ZSCAN29Q8IWY8 852 aaPredicted RBP20.41■□□□□ 0.86
PHKA1-201ENST00000339490 CCDC61Q9Y6R9 512 aa20.41■□□□□ 0.86
PHKA1-201ENST00000339490 GOLGA6L10A6NI86 522 aa20.41■□□□□ 0.86
PHKA1-201ENST00000339490 ESPNB1AK53 854 aa20.41■□□□□ 0.86
PHKA1-201ENST00000339490 BOLA2Q9H3K6 86 aa20.41■□□□□ 0.86
PHKA1-201ENST00000339490 SEPT11Q9NVA2 429 aaKnown RBP20.41■□□□□ 0.86
PHKA1-201ENST00000339490 ABCF2Q9UG63 623 aa20.41■□□□□ 0.86
PHKA1-201ENST00000339490 CDK13Q14004 1512 aaKnown RBP20.4■□□□□ 0.86
PHKA1-201ENST00000339490 C11orf95C9JLR9 678 aaPredicted RBP20.4■□□□□ 0.86
PHKA1-201ENST00000339490 IGHMBP2P38935 993 aaKnown RBP20.4■□□□□ 0.86
PHKA1-201ENST00000339490 METTL24Q5JXM2 366 aa20.4■□□□□ 0.86
PHKA1-201ENST00000339490 FAM193AP78312 1265 aa20.4■□□□□ 0.86
PHKA1-201ENST00000339490 USHBP1Q8N6Y0 703 aa20.39■□□□□ 0.86
PHKA1-201ENST00000339490 CENPHQ9H3R5 247 aa20.39■□□□□ 0.86
PHKA1-201ENST00000339490 PAF1Q8N7H5 531 aa20.39■□□□□ 0.85
PHKA1-201ENST00000339490 SMTNL1A8MU46 457 aa20.39■□□□□ 0.85
PHKA1-201ENST00000339490 WASF1Q92558 559 aa20.39■□□□□ 0.85
PHKA1-201ENST00000339490 SNAPC4Q5SXM2 1469 aa20.39■□□□□ 0.85
PHKA1-201ENST00000339490 USP5P45974 858 aa20.39■□□□□ 0.85
PHKA1-201ENST00000339490 BMP2KQ9NSY1 1161 aaPredicted RBP20.39■□□□□ 0.85
PHKA1-201ENST00000339490 F6X3S4 739 aa20.38■□□□□ 0.85
PHKA1-201ENST00000339490 GLRX3O76003 335 aaKnown RBP20.38■□□□□ 0.85
PHKA1-201ENST00000339490 PTCD1O75127 700 aaKnown RBP20.38■□□□□ 0.85
PHKA1-201ENST00000339490 MYD88Q99836 296 aa20.38■□□□□ 0.85
PHKA1-201ENST00000339490 NAIPQ13075 1403 aa20.38■□□□□ 0.85
PHKA1-201ENST00000339490 RAB11FIP3O75154 756 aa20.38■□□□□ 0.85
PHKA1-201ENST00000339490 ERLIN1O75477 346 aa20.38■□□□□ 0.85
PHKA1-201ENST00000339490 CFAP100Q494V2 611 aa20.38■□□□□ 0.85
PHKA1-201ENST00000339490 MRC2Q9UBG0 1479 aa20.37■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms