RNA–Protein interactions for RNA: ENST00000335972.10

UBA1-201, Transcript of ubiquitin like modifier activating enzyme 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBA1, Length 3,559 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA1-201ENST00000335972 MSH6P52701 1360 aa18.51■□□□□ 0.55
UBA1-201ENST00000335972 TSHZ3Q63HK5 1081 aa18.51■□□□□ 0.55
UBA1-201ENST00000335972 MON2Q7Z3U7 1717 aa18.5■□□□□ 0.55
UBA1-201ENST00000335972 C3P01024 1663 aa18.5■□□□□ 0.55
UBA1-201ENST00000335972 PIK3R4Q99570 1358 aa18.5■□□□□ 0.55
UBA1-201ENST00000335972 HSP90AA1P07900 732 aaKnown RBP18.5■□□□□ 0.55
UBA1-201ENST00000335972 PLEKHM2Q8IWE5 1019 aa18.5■□□□□ 0.55
UBA1-201ENST00000335972 KIF13AQ9H1H9 1805 aa18.5■□□□□ 0.55
UBA1-201ENST00000335972 ITSN1Q15811 1721 aa18.5■□□□□ 0.55
UBA1-201ENST00000335972 MCM4P33991 863 aa18.49■□□□□ 0.55
UBA1-201ENST00000335972 KIF2CQ99661 725 aa18.49■□□□□ 0.55
UBA1-201ENST00000335972 RIMS1Q86UR5 1692 aaKnown RBP18.49■□□□□ 0.55
UBA1-201ENST00000335972 OVOS2A0A0J9YW53 1432 aa18.49■□□□□ 0.55
UBA1-201ENST00000335972 OVOS2Q6IE36 1432 aa18.49■□□□□ 0.55
UBA1-201ENST00000335972 KCNA6P17658 529 aa18.48■□□□□ 0.55
UBA1-201ENST00000335972 UBR1Q8IWV7 1749 aa18.48■□□□□ 0.55
UBA1-201ENST00000335972 CHMP4BQ9H444 224 aaKnown RBP18.48■□□□□ 0.55
UBA1-201ENST00000335972 CHMP5Q9NZZ3 219 aa18.48■□□□□ 0.55
UBA1-201ENST00000335972 CEP85Q6P2H3 762 aa18.48■□□□□ 0.55
UBA1-201ENST00000335972 PEAK1Q9H792 1746 aa18.47■□□□□ 0.55
UBA1-201ENST00000335972 RBM25P49756 843 aaKnown RBP18.47■□□□□ 0.55
UBA1-201ENST00000335972 PLEKHG1Q9ULL1 1385 aa18.47■□□□□ 0.55
UBA1-201ENST00000335972 INTS3Q68E01 1043 aaKnown RBP18.47■□□□□ 0.55
UBA1-201ENST00000335972 DCTPP1Q9H773 170 aa18.47■□□□□ 0.55
UBA1-201ENST00000335972 AKAP12Q02952 1782 aa18.46■□□□□ 0.55
UBA1-201ENST00000335972 ABTB2Q8N961 1025 aa18.46■□□□□ 0.55
UBA1-201ENST00000335972 ANKRD44Q8N8A2 993 aa18.45■□□□□ 0.54
UBA1-201ENST00000335972 EXOC6BQ9Y2D4 811 aa18.45■□□□□ 0.54
UBA1-201ENST00000335972 RGS12O14924 1447 aa18.45■□□□□ 0.54
UBA1-201ENST00000335972 KNDC1Q76NI1 1749 aa18.45■□□□□ 0.54
UBA1-201ENST00000335972 CDC45O75419 566 aa18.45■□□□□ 0.54
UBA1-201ENST00000335972 CRB1P82279 1406 aa18.43■□□□□ 0.54
UBA1-201ENST00000335972 RTL1A6NKG5 1358 aa18.43■□□□□ 0.54
UBA1-201ENST00000335972 XPCQ01831 940 aaPredicted RBP18.42■□□□□ 0.54
UBA1-201ENST00000335972 FKBP5Q13451 457 aaPredicted RBP18.42■□□□□ 0.54
UBA1-201ENST00000335972 TTC22Q5TAA0 569 aa18.42■□□□□ 0.54
UBA1-201ENST00000335972 TRAK2O60296 914 aa18.42■□□□□ 0.54
UBA1-201ENST00000335972 CEP170BQ9Y4F5 1589 aaPredicted RBP18.42■□□□□ 0.54
UBA1-201ENST00000335972 SDSP20132 328 aa18.41■□□□□ 0.54
UBA1-201ENST00000335972 ATP10DQ9P241 1426 aa18.41■□□□□ 0.54
UBA1-201ENST00000335972 RGPD8O14715 1765 aaPredicted RBP18.41■□□□□ 0.54
UBA1-201ENST00000335972 TRHP20396 242 aaPredicted RBP18.41■□□□□ 0.54
UBA1-201ENST00000335972 GAS2L2Q8NHY3 880 aa18.41■□□□□ 0.54
UBA1-201ENST00000335972 TNPO1Q92973 898 aaKnown RBP18.41■□□□□ 0.54
UBA1-201ENST00000335972 FLT4P35916 1363 aa18.41■□□□□ 0.54
UBA1-201ENST00000335972 SETD1BQ9UPS6 1966 aaKnown RBP18.4■□□□□ 0.54
UBA1-201ENST00000335972 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.4■□□□□ 0.54
UBA1-201ENST00000335972 USP31Q70CQ4 1352 aa18.4■□□□□ 0.54
UBA1-201ENST00000335972 PANK2Q9BZ23 570 aa18.4■□□□□ 0.54
UBA1-201ENST00000335972 TBX22Q9Y458 520 aa18.4■□□□□ 0.54
UBA1-201ENST00000335972 PRKCSHP14314 528 aaPredicted RBP18.39■□□□□ 0.53
UBA1-201ENST00000335972 HOXC9P31274 260 aa18.39■□□□□ 0.53
UBA1-201ENST00000335972 STK31Q9BXU1 1019 aa18.39■□□□□ 0.53
UBA1-201ENST00000335972 EIF2S2P20042 333 aaKnown RBP18.39■□□□□ 0.53
UBA1-201ENST00000335972 IL17REQ8NFR9 667 aa18.39■□□□□ 0.53
UBA1-201ENST00000335972 LMOD2Q6P5Q4 547 aa18.39■□□□□ 0.53
UBA1-201ENST00000335972 THEMISQ8N1K5 641 aaPredicted RBP18.39■□□□□ 0.53
UBA1-201ENST00000335972 SBNO1A3KN83 1393 aa18.38■□□□□ 0.53
UBA1-201ENST00000335972 RPAP2Q8IXW5 612 aaPredicted RBP18.38■□□□□ 0.53
UBA1-201ENST00000335972 ANXA1P04083 346 aa18.37■□□□□ 0.53
UBA1-201ENST00000335972 SSH2Q76I76 1423 aa18.37■□□□□ 0.53
UBA1-201ENST00000335972 SSFA2P28290 1259 aa18.37■□□□□ 0.53
UBA1-201ENST00000335972 TTC21AQ8NDW8 1320 aa18.37■□□□□ 0.53
UBA1-201ENST00000335972 PTPRCP08575 1304 aa18.37■□□□□ 0.53
UBA1-201ENST00000335972 FLIIQ13045 1269 aa18.37■□□□□ 0.53
UBA1-201ENST00000335972 SNX21Q969T3 373 aa18.37■□□□□ 0.53
UBA1-201ENST00000335972 KIAA0232Q92628 1395 aa18.36■□□□□ 0.53
UBA1-201ENST00000335972 IGSF1Q8N6C5 1336 aa18.36■□□□□ 0.53
UBA1-201ENST00000335972 PNMA6EA0A0J9YXQ4 647 aa18.36■□□□□ 0.53
UBA1-201ENST00000335972 GNAT3A8MTJ3 354 aa18.36■□□□□ 0.53
UBA1-201ENST00000335972 K7ELQ4 463 aaPredicted RBP18.36■□□□□ 0.53
UBA1-201ENST00000335972 NRKQ7Z2Y5 1582 aa18.36■□□□□ 0.53
UBA1-201ENST00000335972 ARHGEF10O15013 1369 aa18.36■□□□□ 0.53
UBA1-201ENST00000335972 PHAXQ9H814 394 aaKnown RBP18.36■□□□□ 0.53
UBA1-201ENST00000335972 HAP1P54257 671 aaPredicted RBP18.35■□□□□ 0.53
UBA1-201ENST00000335972 ANO8Q9HCE9 1232 aaPredicted RBP18.35■□□□□ 0.53
UBA1-201ENST00000335972 NOL8Q76FK4 1167 aaKnown RBP18.34■□□□□ 0.53
UBA1-201ENST00000335972 LRRC59Q96AG4 307 aaKnown RBP18.34■□□□□ 0.53
UBA1-201ENST00000335972 XRCC6P12956 609 aaKnown RBP eCLIP18.34■□□□□ 0.53
UBA1-201ENST00000335972 LGR6Q9HBX8 967 aa18.34■□□□□ 0.53
UBA1-201ENST00000335972 LRRFIP2Q9Y608 721 aaKnown RBP18.34■□□□□ 0.53
UBA1-201ENST00000335972 GOLGA6L3A6NEY3 463 aa18.33■□□□□ 0.53
UBA1-201ENST00000335972 KCNQ3O43525 872 aa18.33■□□□□ 0.53
UBA1-201ENST00000335972 DDIT3P35638 169 aa18.33■□□□□ 0.53
UBA1-201ENST00000335972 FOXD4L5Q5VV16 416 aaPredicted RBP18.33■□□□□ 0.53
UBA1-201ENST00000335972 FOXD4L4Q8WXT5 416 aaPredicted RBP18.33■□□□□ 0.53
UBA1-201ENST00000335972 CHAMP1Q96JM3 812 aa18.33■□□□□ 0.53
UBA1-201ENST00000335972 USP26Q9BXU7 913 aa18.33■□□□□ 0.53
UBA1-201ENST00000335972 IL1RAPL2Q9NP60 686 aa18.33■□□□□ 0.53
UBA1-201ENST00000335972 DIP2AQ14689 1571 aa18.33■□□□□ 0.52
UBA1-201ENST00000335972 ESCO1Q5FWF5 840 aa18.33■□□□□ 0.52
UBA1-201ENST00000335972 GNAI2P04899 355 aa18.32■□□□□ 0.52
UBA1-201ENST00000335972 PKP1Q13835 747 aa18.32■□□□□ 0.52
UBA1-201ENST00000335972 RILPL2Q969X0 211 aa18.32■□□□□ 0.52
UBA1-201ENST00000335972 TOPAZ1Q8N9V7 1692 aa18.32■□□□□ 0.52
UBA1-201ENST00000335972 MAP4K4O95819 1239 aaPredicted RBP18.32■□□□□ 0.52
UBA1-201ENST00000335972 CCT4P50991 539 aaKnown RBP18.31■□□□□ 0.52
UBA1-201ENST00000335972 NBPF6Q5VWK0 638 aa18.31■□□□□ 0.52
UBA1-201ENST00000335972 NBPF4Q96M43 638 aa18.31■□□□□ 0.52
UBA1-201ENST00000335972 AK9Q5TCS8 1911 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms