RNA–Protein interactions for RNA: ENST00000334409.9

PDCD1-201, Transcript of programmed cell death 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDCD1, Length 2,114 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD1-201ENST00000334409 PRDM11Q9NQV5 511 aa21.56■■□□□ 1.04
PDCD1-201ENST00000334409 C20orf194Q5TEA3 1177 aa21.55■■□□□ 1.04
PDCD1-201ENST00000334409 NBPF6Q5VWK0 638 aa21.55■■□□□ 1.04
PDCD1-201ENST00000334409 NBPF4Q96M43 638 aa21.55■■□□□ 1.04
PDCD1-201ENST00000334409 CENPQQ7L2Z9 268 aaPredicted RBP21.55■■□□□ 1.04
PDCD1-201ENST00000334409 NGEFQ8N5V2 710 aa21.54■■□□□ 1.04
PDCD1-201ENST00000334409 VSIG10Q8N0Z9 540 aa21.53■■□□□ 1.04
PDCD1-201ENST00000334409 COL16A1Q07092 1604 aaPredicted RBP21.53■■□□□ 1.04
PDCD1-201ENST00000334409 IQSEC2Q5JU85 1478 aa21.53■■□□□ 1.04
PDCD1-201ENST00000334409 RGPD2P0DJD1 1756 aa21.53■■□□□ 1.04
PDCD1-201ENST00000334409 NUTM2BA6NNL0 878 aaPredicted RBP21.52■■□□□ 1.04
PDCD1-201ENST00000334409 NUTM2EB1AL46 878 aaPredicted RBP21.52■■□□□ 1.04
PDCD1-201ENST00000334409 HSP90AA2PQ14568 343 aaPredicted RBP21.52■■□□□ 1.04
PDCD1-201ENST00000334409 NUTM2AQ8IVF1 878 aaPredicted RBP21.52■■□□□ 1.04
PDCD1-201ENST00000334409 IGSF1Q8N6C5 1336 aa21.52■■□□□ 1.04
PDCD1-201ENST00000334409 RGPD1P0DJD0 1748 aa21.52■■□□□ 1.04
PDCD1-201ENST00000334409 FAM83GA6ND36 823 aa21.52■■□□□ 1.03
PDCD1-201ENST00000334409 TMPOP42166 694 aaKnown RBP21.52■■□□□ 1.03
PDCD1-201ENST00000334409 ABCA3Q99758 1704 aa21.51■■□□□ 1.03
PDCD1-201ENST00000334409 PNNQ9H307 717 aaKnown RBP21.51■■□□□ 1.03
PDCD1-201ENST00000334409 RRAGDQ9NQL2 400 aaPredicted RBP21.51■■□□□ 1.03
PDCD1-201ENST00000334409 HSP90AA1P07900 732 aaKnown RBP21.5■■□□□ 1.03
PDCD1-201ENST00000334409 CSB-PGBD3P0DP91 1061 aa21.5■■□□□ 1.03
PDCD1-201ENST00000334409 ADAMTS2O95450 1211 aa21.5■■□□□ 1.03
PDCD1-201ENST00000334409 RIPK4P57078 832 aa21.5■■□□□ 1.03
PDCD1-201ENST00000334409 CPDO75976 1380 aa21.5■■□□□ 1.03
PDCD1-201ENST00000334409 COL18A1P39060 1754 aa21.49■■□□□ 1.03
PDCD1-201ENST00000334409 ERBB3P21860 1342 aa21.49■■□□□ 1.03
PDCD1-201ENST00000334409 WWC1Q8IX03 1113 aa21.49■■□□□ 1.03
PDCD1-201ENST00000334409 NLRP2Q9NX02 1062 aa21.48■■□□□ 1.03
PDCD1-201ENST00000334409 CLCN1P35523 988 aa21.47■■□□□ 1.03
PDCD1-201ENST00000334409 SLC4A3P48751 1232 aa21.47■■□□□ 1.03
PDCD1-201ENST00000334409 SPINK5Q9NQ38 1064 aaPredicted RBP21.47■■□□□ 1.03
PDCD1-201ENST00000334409 STRN4Q9NRL3 753 aa21.47■■□□□ 1.03
PDCD1-201ENST00000334409 E9PSI1 815 aa21.46■■□□□ 1.03
PDCD1-201ENST00000334409 HSPA1LP34931 641 aa21.46■■□□□ 1.03
PDCD1-201ENST00000334409 TRIM35Q9UPQ4 493 aa21.46■■□□□ 1.03
PDCD1-201ENST00000334409 CAMTA1Q9Y6Y1 1673 aa21.45■■□□□ 1.02
PDCD1-201ENST00000334409 NFE2L2Q16236 605 aa21.45■■□□□ 1.02
PDCD1-201ENST00000334409 C8orf34Q49A92 452 aa21.45■■□□□ 1.02
PDCD1-201ENST00000334409 KDRP35968 1356 aa21.45■■□□□ 1.02
PDCD1-201ENST00000334409 THUMPD2Q9BTF0 503 aaKnown RBP21.44■■□□□ 1.02
PDCD1-201ENST00000334409 MTHFSDQ2M296 383 aaKnown RBP21.43■■□□□ 1.02
PDCD1-201ENST00000334409 BTG4Q9NY30 223 aa21.43■■□□□ 1.02
PDCD1-201ENST00000334409 DCTN1Q14203 1278 aa21.43■■□□□ 1.02
PDCD1-201ENST00000334409 EVA1CP58658 441 aa21.42■■□□□ 1.02
PDCD1-201ENST00000334409 COL22A1Q8NFW1 1626 aaPredicted RBP21.42■■□□□ 1.02
PDCD1-201ENST00000334409 NAP1L5Q96NT1 182 aaPredicted RBP21.42■■□□□ 1.02
PDCD1-201ENST00000334409 SKAP1Q86WV1 359 aa21.41■■□□□ 1.02
PDCD1-201ENST00000334409 LARP1Q6PKG0 1096 aaKnown RBP21.4■■□□□ 1.02
PDCD1-201ENST00000334409 TOM1L2Q6ZVM7 507 aa21.4■■□□□ 1.02
PDCD1-201ENST00000334409 PHF23Q9BUL5 403 aaPredicted RBP21.4■■□□□ 1.02
PDCD1-201ENST00000334409 VIRMAQ69YN4 1812 aaKnown RBP21.4■■□□□ 1.02
PDCD1-201ENST00000334409 BECN1Q14457 450 aa21.39■■□□□ 1.01
PDCD1-201ENST00000334409 CCDC27Q2M243 656 aa21.39■■□□□ 1.01
PDCD1-201ENST00000334409 LMO7Q8WWI1 1683 aa21.39■■□□□ 1.01
PDCD1-201ENST00000334409 DLG5Q8TDM6 1919 aa21.38■■□□□ 1.01
PDCD1-201ENST00000334409 COL5A2P05997 1499 aaPredicted RBP21.38■■□□□ 1.01
PDCD1-201ENST00000334409 MCM10Q7L590 875 aa21.37■■□□□ 1.01
PDCD1-201ENST00000334409 JCADQ9P266 1359 aa21.37■■□□□ 1.01
PDCD1-201ENST00000334409 WDR17Q8IZU2 1322 aa21.37■■□□□ 1.01
PDCD1-201ENST00000334409 PDE3AQ14432 1141 aa21.35■■□□□ 1.01
PDCD1-201ENST00000334409 WDR63Q8IWG1 891 aa21.35■■□□□ 1.01
PDCD1-201ENST00000334409 ABCC6O95255 1503 aa21.34■■□□□ 1.01
PDCD1-201ENST00000334409 RAPGEF4Q8WZA2 1011 aa21.34■■□□□ 1.01
PDCD1-201ENST00000334409 TSR2Q969E8 191 aaKnown RBP21.34■■□□□ 1.01
PDCD1-201ENST00000334409 BCAR3O75815 825 aa21.33■■□□□ 1.01
PDCD1-201ENST00000334409 GAS2L2Q8NHY3 880 aa21.33■■□□□ 1.01
PDCD1-201ENST00000334409 C8orf37Q96NL8 207 aa21.33■■□□□ 1.01
PDCD1-201ENST00000334409 GOLGA6L3A6NEY3 463 aa21.32■■□□□ 1
PDCD1-201ENST00000334409 NCAPD2Q15021 1401 aa21.32■■□□□ 1
PDCD1-201ENST00000334409 COL14A1Q05707 1796 aaKnown RBP21.31■■□□□ 1
PDCD1-201ENST00000334409 FSD2A1L4K1 749 aa21.31■■□□□ 1
PDCD1-201ENST00000334409 FAM208AQ9UK61 1670 aaKnown RBP21.31■■□□□ 1
PDCD1-201ENST00000334409 PLEKHO1Q53GL0 409 aaPredicted RBP21.31■■□□□ 1
PDCD1-201ENST00000334409 ZNF530Q6P9A1 599 aaPredicted RBP21.31■■□□□ 1
PDCD1-201ENST00000334409 MEGF6O75095 1541 aa21.3■■□□□ 1
PDCD1-201ENST00000334409 TATP17735 454 aaPredicted RBP21.3■■□□□ 1
PDCD1-201ENST00000334409 NCBP3Q53F19 620 aaKnown RBP21.3■■□□□ 1
PDCD1-201ENST00000334409 RTF1Q92541 710 aaKnown RBP21.3■■□□□ 1
PDCD1-201ENST00000334409 CARD10Q9BWT7 1032 aa21.29■■□□□ 1
PDCD1-201ENST00000334409 GNAT3A8MTJ3 354 aa21.29■■□□□ 1
PDCD1-201ENST00000334409 LMOD3Q0VAK6 560 aa21.29■■□□□ 1
PDCD1-201ENST00000334409 NGLY1Q96IV0 654 aa21.29■■□□□ 1
PDCD1-201ENST00000334409 ISY1Q9ULR0 285 aaKnown RBP21.29■■□□□ 1
PDCD1-201ENST00000334409 TPM2P07951 284 aa21.28■■□□□ 1
PDCD1-201ENST00000334409 MIS18AQ9NYP9 233 aa21.27■■□□□ 1
PDCD1-201ENST00000334409 PODXL2Q9NZ53 605 aa21.27■■□□□ 1
PDCD1-201ENST00000334409 LRP6O75581 1613 aa21.27■■□□□ 1
PDCD1-201ENST00000334409 PLCH1Q4KWH8 1693 aa21.26■□□□□ 0.99
PDCD1-201ENST00000334409 AAMPQ13685 434 aa21.26■□□□□ 0.99
PDCD1-201ENST00000334409 MPRIPQ6WCQ1 1025 aa21.26■□□□□ 0.99
PDCD1-201ENST00000334409 IL17REQ8NFR9 667 aa21.26■□□□□ 0.99
PDCD1-201ENST00000334409 LGR6Q9HBX8 967 aa21.26■□□□□ 0.99
PDCD1-201ENST00000334409 CRB1P82279 1406 aa21.26■□□□□ 0.99
PDCD1-201ENST00000334409 MAP3K5Q99683 1374 aa21.26■□□□□ 0.99
PDCD1-201ENST00000334409 AMOTQ4VCS5 1084 aa21.26■□□□□ 0.99
PDCD1-201ENST00000334409 XRCC6P12956 609 aaKnown RBP eCLIP21.25■□□□□ 0.99
PDCD1-201ENST00000334409 MYH16Q9H6N6 1097 aa21.25■□□□□ 0.99
PDCD1-201ENST00000334409 CCDC9Q9Y3X0 531 aaKnown RBP21.25■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms