RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 ARHGAP23Q9P227 1491 aa15.33■□□□□ 0.04
VPS33B-201ENST00000333371 DDX11L8A8MPP1 907 aa15.33■□□□□ 0.04
VPS33B-201ENST00000333371 PLEKHM2Q8IWE5 1019 aa15.33■□□□□ 0.04
VPS33B-201ENST00000333371 PTPRUQ92729 1446 aa15.33■□□□□ 0.04
VPS33B-201ENST00000333371 SMARCA5O60264 1052 aaPredicted RBP15.32■□□□□ 0.04
VPS33B-201ENST00000333371 GAS2L3Q86XJ1 694 aa15.32■□□□□ 0.04
VPS33B-201ENST00000333371 TBX22Q9Y458 520 aa15.32■□□□□ 0.04
VPS33B-201ENST00000333371 SSFA2P28290 1259 aa15.32■□□□□ 0.04
VPS33B-201ENST00000333371 RAB3GAP1Q15042 981 aa15.32■□□□□ 0.04
VPS33B-201ENST00000333371 SULT6B1Q6IMI4 303 aa15.32■□□□□ 0.04
VPS33B-201ENST00000333371 AATKQ6ZMQ8 1374 aa15.32■□□□□ 0.04
VPS33B-201ENST00000333371 ACEP12821 1306 aa15.32■□□□□ 0.04
VPS33B-201ENST00000333371 K7ELQ4 463 aaPredicted RBP15.31■□□□□ 0.04
VPS33B-201ENST00000333371 API5Q9BZZ5 524 aaKnown RBP15.31■□□□□ 0.04
VPS33B-201ENST00000333371 CDC45O75419 566 aa15.3■□□□□ 0.04
VPS33B-201ENST00000333371 GRPEL1Q9HAV7 217 aa15.3■□□□□ 0.04
VPS33B-201ENST00000333371 MIS18AQ9NYP9 233 aa15.3■□□□□ 0.04
VPS33B-201ENST00000333371 TOPAZ1Q8N9V7 1692 aa15.3■□□□□ 0.04
VPS33B-201ENST00000333371 EIF4A2Q14240 407 aaKnown RBP15.3■□□□□ 0.04
VPS33B-201ENST00000333371 TTC21BQ7Z4L5 1316 aa15.29■□□□□ 0.04
VPS33B-201ENST00000333371 CHMP4BQ9H444 224 aaKnown RBP15.29■□□□□ 0.04
VPS33B-201ENST00000333371 PLEKHG3A1L390 1219 aa15.29■□□□□ 0.04
VPS33B-201ENST00000333371 LMOD3Q0VAK6 560 aa15.29■□□□□ 0.04
VPS33B-201ENST00000333371 DCTPP1Q9H773 170 aa15.29■□□□□ 0.04
VPS33B-201ENST00000333371 DIP2AQ14689 1571 aa15.28■□□□□ 0.04
VPS33B-201ENST00000333371 MRE11P49959 708 aa15.28■□□□□ 0.04
VPS33B-201ENST00000333371 MEIS3Q99687 375 aa15.28■□□□□ 0.04
VPS33B-201ENST00000333371 MSH6P52701 1360 aa15.27■□□□□ 0.04
VPS33B-201ENST00000333371 HSP90AB2PQ58FF8 381 aa15.27■□□□□ 0.04
VPS33B-201ENST00000333371 TTC22Q5TAA0 569 aa15.27■□□□□ 0.04
VPS33B-201ENST00000333371 GBP4Q96PP9 640 aa15.27■□□□□ 0.04
VPS33B-201ENST00000333371 RGS12O14924 1447 aa15.27■□□□□ 0.04
VPS33B-201ENST00000333371 ATP10DQ9P241 1426 aa15.27■□□□□ 0.03
VPS33B-201ENST00000333371 CIZ1Q9ULV3 898 aaPredicted RBP15.27■□□□□ 0.03
VPS33B-201ENST00000333371 RIMS1Q86UR5 1692 aaKnown RBP15.27■□□□□ 0.03
VPS33B-201ENST00000333371 USP6P35125 1406 aa15.26■□□□□ 0.03
VPS33B-201ENST00000333371 FOXO3O43524 673 aa15.26■□□□□ 0.03
VPS33B-201ENST00000333371 NRKQ7Z2Y5 1582 aa15.26■□□□□ 0.03
VPS33B-201ENST00000333371 PKP1Q13835 747 aa15.25■□□□□ 0.03
VPS33B-201ENST00000333371 INTS3Q68E01 1043 aaKnown RBP15.25■□□□□ 0.03
VPS33B-201ENST00000333371 CEP85Q6P2H3 762 aa15.25■□□□□ 0.03
VPS33B-201ENST00000333371 NGDNQ8NEJ9 315 aaKnown RBP15.25■□□□□ 0.03
VPS33B-201ENST00000333371 CEP170BQ9Y4F5 1589 aaPredicted RBP15.25■□□□□ 0.03
VPS33B-201ENST00000333371 ANKRD44Q8N8A2 993 aa15.25■□□□□ 0.03
VPS33B-201ENST00000333371 F6X3S4 739 aa15.24■□□□□ 0.03
VPS33B-201ENST00000333371 ERBB4Q15303 1308 aa15.24■□□□□ 0.03
VPS33B-201ENST00000333371 SDSP20132 328 aa15.24■□□□□ 0.03
VPS33B-201ENST00000333371 RGPD8O14715 1765 aaPredicted RBP15.24■□□□□ 0.03
VPS33B-201ENST00000333371 G2E3Q7L622 706 aa15.24■□□□□ 0.03
VPS33B-201ENST00000333371 USP26Q9BXU7 913 aa15.24■□□□□ 0.03
VPS33B-201ENST00000333371 CHL1O00533 1208 aa15.23■□□□□ 0.03
VPS33B-201ENST00000333371 SLC4A10Q6U841 1118 aa15.23■□□□□ 0.03
VPS33B-201ENST00000333371 RTL1A6NKG5 1358 aa15.23■□□□□ 0.03
VPS33B-201ENST00000333371 SLC4A2P04920 1241 aa15.23■□□□□ 0.03
VPS33B-201ENST00000333371 TSHZ3Q63HK5 1081 aa15.23■□□□□ 0.03
VPS33B-201ENST00000333371 CHAMP1Q96JM3 812 aa15.23■□□□□ 0.03
VPS33B-201ENST00000333371 OVOS2A0A0J9YW53 1432 aa15.22■□□□□ 0.03
VPS33B-201ENST00000333371 OVOS2Q6IE36 1432 aa15.22■□□□□ 0.03
VPS33B-201ENST00000333371 XRN1Q8IZH2 1706 aaKnown RBP15.22■□□□□ 0.03
VPS33B-201ENST00000333371 PEAK1Q9H792 1746 aa15.22■□□□□ 0.03
VPS33B-201ENST00000333371 BAG4O95429 457 aaKnown RBP15.22■□□□□ 0.03
VPS33B-201ENST00000333371 KCNA6P17658 529 aa15.22■□□□□ 0.03
VPS33B-201ENST00000333371 TTC21AQ8NDW8 1320 aa15.21■□□□□ 0.03
VPS33B-201ENST00000333371 ZGPATQ8N5A5 531 aaKnown RBP15.2■□□□□ 0.02
VPS33B-201ENST00000333371 ANKLE2Q86XL3 938 aa15.2■□□□□ 0.02
VPS33B-201ENST00000333371 NAP1L5Q96NT1 182 aaPredicted RBP15.2■□□□□ 0.02
VPS33B-201ENST00000333371 DDX49Q9Y6V7 483 aaKnown RBP15.2■□□□□ 0.02
VPS33B-201ENST00000333371 RABEP1Q15276 862 aa15.19■□□□□ 0.02
VPS33B-201ENST00000333371 MCTP1Q6DN14 999 aa15.19■□□□□ 0.02
VPS33B-201ENST00000333371 RPAP2Q8IXW5 612 aaPredicted RBP15.19■□□□□ 0.02
VPS33B-201ENST00000333371 NECTIN2Q92692 538 aa15.19■□□□□ 0.02
VPS33B-201ENST00000333371 NALCNQ8IZF0 1738 aa15.19■□□□□ 0.02
VPS33B-201ENST00000333371 CLCN1P35523 988 aa15.19■□□□□ 0.02
VPS33B-201ENST00000333371 MAP3K19Q56UN5 1328 aa15.18■□□□□ 0.02
VPS33B-201ENST00000333371 NCLP19338 710 aaKnown RBP15.18■□□□□ 0.02
VPS33B-201ENST00000333371 EXOC6BQ9Y2D4 811 aa15.18■□□□□ 0.02
VPS33B-201ENST00000333371 KIF24Q5T7B8 1368 aa15.18■□□□□ 0.02
VPS33B-201ENST00000333371 MTHFSDQ2M296 383 aaKnown RBP15.18■□□□□ 0.02
VPS33B-201ENST00000333371 SKOR2Q2VWA4 1001 aaPredicted RBP15.18■□□□□ 0.02
VPS33B-201ENST00000333371 USP31Q70CQ4 1352 aa15.17■□□□□ 0.02
VPS33B-201ENST00000333371 FOXD4L5Q5VV16 416 aaPredicted RBP15.17■□□□□ 0.02
VPS33B-201ENST00000333371 FOXD4L4Q8WXT5 416 aaPredicted RBP15.17■□□□□ 0.02
VPS33B-201ENST00000333371 CRB1P82279 1406 aa15.17■□□□□ 0.02
VPS33B-201ENST00000333371 SSH2Q76I76 1423 aa15.17■□□□□ 0.02
VPS33B-201ENST00000333371 ESPNB1AK53 854 aa15.17■□□□□ 0.02
VPS33B-201ENST00000333371 TSPYL4Q9UJ04 414 aa15.17■□□□□ 0.02
VPS33B-201ENST00000333371 ANKARQ7Z5J8 1434 aa15.16■□□□□ 0.02
VPS33B-201ENST00000333371 PTPRCP08575 1304 aa15.15■□□□□ 0.02
VPS33B-201ENST00000333371 KIAA0232Q92628 1395 aa15.15■□□□□ 0.02
VPS33B-201ENST00000333371 GOLGA6L22H0YM25 854 aa15.15■□□□□ 0.02
VPS33B-201ENST00000333371 AMPHP49418 695 aa15.15■□□□□ 0.02
VPS33B-201ENST00000333371 CAVIN1Q6NZI2 390 aaKnown RBP15.15■□□□□ 0.02
VPS33B-201ENST00000333371 SETD1BQ9UPS6 1966 aaKnown RBP15.15■□□□□ 0.02
VPS33B-201ENST00000333371 NLRP6P59044 892 aa15.14■□□□□ 0.01
VPS33B-201ENST00000333371 TRIM44Q96DX7 344 aaPredicted RBP15.14■□□□□ 0.01
VPS33B-201ENST00000333371 FMN2Q9NZ56 1722 aa15.14■□□□□ 0.01
VPS33B-201ENST00000333371 ZNF142P52746 1687 aaPredicted RBP15.14■□□□□ 0.01
VPS33B-201ENST00000333371 RGPD1P0DJD0 1748 aa15.14■□□□□ 0.01
VPS33B-201ENST00000333371 KLHL40Q2TBA0 621 aa15.14■□□□□ 0.01
VPS33B-201ENST00000333371 PDE1AP54750 535 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms