RNA–Protein interactions for RNA: ENST00000333319.6

LINC01006-201, Transcript of long intergenic non-protein coding RNA 1006, humanhuman

BASIC

Gene LINC01006, Length 2,292 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006-201ENST00000333319 CRB1P82279 1406 aa25.63■■□□□ 1.69
LINC01006-201ENST00000333319 MIS18AQ9NYP9 233 aa25.62■■□□□ 1.69
LINC01006-201ENST00000333319 RTF1Q92541 710 aaKnown RBP25.61■■□□□ 1.69
LINC01006-201ENST00000333319 NLRP6P59044 892 aa25.61■■□□□ 1.69
LINC01006-201ENST00000333319 EYA1Q99502 592 aa25.61■■□□□ 1.69
LINC01006-201ENST00000333319 RGS12O14924 1447 aa25.6■■□□□ 1.69
LINC01006-201ENST00000333319 KCNA6P17658 529 aa25.6■■□□□ 1.69
LINC01006-201ENST00000333319 SPRYD3Q8NCJ5 442 aa25.6■■□□□ 1.69
LINC01006-201ENST00000333319 RIMS1Q86UR5 1692 aaKnown RBP25.6■■□□□ 1.69
LINC01006-201ENST00000333319 PIK3C2AO00443 1686 aa25.6■■□□□ 1.69
LINC01006-201ENST00000333319 KDRP35968 1356 aa25.59■■□□□ 1.69
LINC01006-201ENST00000333319 XRN1Q8IZH2 1706 aaKnown RBP25.59■■□□□ 1.69
LINC01006-201ENST00000333319 IGSF1Q8N6C5 1336 aa25.58■■□□□ 1.69
LINC01006-201ENST00000333319 PTPRCP08575 1304 aa25.57■■□□□ 1.68
LINC01006-201ENST00000333319 RBM25P49756 843 aaKnown RBP25.57■■□□□ 1.68
LINC01006-201ENST00000333319 TSPYL4Q9UJ04 414 aa25.57■■□□□ 1.68
LINC01006-201ENST00000333319 SLC4A2P04920 1241 aa25.57■■□□□ 1.68
LINC01006-201ENST00000333319 NUTM2GQ5VZR2 741 aa25.57■■□□□ 1.68
LINC01006-201ENST00000333319 CEP170BQ9Y4F5 1589 aaPredicted RBP25.57■■□□□ 1.68
LINC01006-201ENST00000333319 DCTPP1Q9H773 170 aa25.56■■□□□ 1.68
LINC01006-201ENST00000333319 ANKARQ7Z5J8 1434 aa25.55■■□□□ 1.68
LINC01006-201ENST00000333319 GAS2L2Q8NHY3 880 aa25.54■■□□□ 1.68
LINC01006-201ENST00000333319 ANKRD44Q8N8A2 993 aa25.54■■□□□ 1.68
LINC01006-201ENST00000333319 MSH6P52701 1360 aa25.54■■□□□ 1.68
LINC01006-201ENST00000333319 HSCBQ8IWL3 235 aa25.53■■□□□ 1.68
LINC01006-201ENST00000333319 ATP10DQ9P241 1426 aa25.52■■□□□ 1.68
LINC01006-201ENST00000333319 TBC1D9Q6ZT07 1266 aa25.52■■□□□ 1.68
LINC01006-201ENST00000333319 HOXC9P31274 260 aa25.52■■□□□ 1.68
LINC01006-201ENST00000333319 RPAP2Q8IXW5 612 aaPredicted RBP25.52■■□□□ 1.68
LINC01006-201ENST00000333319 CEP85Q6P2H3 762 aa25.51■■□□□ 1.67
LINC01006-201ENST00000333319 ABTB2Q8N961 1025 aa25.51■■□□□ 1.67
LINC01006-201ENST00000333319 MEIS3Q99687 375 aa25.51■■□□□ 1.67
LINC01006-201ENST00000333319 RTL1A6NKG5 1358 aa25.5■■□□□ 1.67
LINC01006-201ENST00000333319 PLEKHM2Q8IWE5 1019 aa25.5■■□□□ 1.67
LINC01006-201ENST00000333319 G2E3Q7L622 706 aa25.49■■□□□ 1.67
LINC01006-201ENST00000333319 GSPT1P15170 499 aaKnown RBP25.48■■□□□ 1.67
LINC01006-201ENST00000333319 C16orf71Q8IYS4 520 aaPredicted RBP25.47■■□□□ 1.67
LINC01006-201ENST00000333319 MARF1Q9Y4F3 1742 aaKnown RBP25.47■■□□□ 1.67
LINC01006-201ENST00000333319 HTATSF1O43719 755 aaKnown RBP25.47■■□□□ 1.67
LINC01006-201ENST00000333319 LTV1Q96GA3 475 aaPredicted RBP25.47■■□□□ 1.67
LINC01006-201ENST00000333319 GNAT3A8MTJ3 354 aa25.46■■□□□ 1.67
LINC01006-201ENST00000333319 CDC45O75419 566 aa25.46■■□□□ 1.67
LINC01006-201ENST00000333319 SLC4A10Q6U841 1118 aa25.46■■□□□ 1.67
LINC01006-201ENST00000333319 C14orf37Q86TY3 774 aa25.46■■□□□ 1.67
LINC01006-201ENST00000333319 CHMP5Q9NZZ3 219 aa25.46■■□□□ 1.67
LINC01006-201ENST00000333319 F6X3S4 739 aa25.46■■□□□ 1.67
LINC01006-201ENST00000333319 SNX21Q969T3 373 aa25.46■■□□□ 1.67
LINC01006-201ENST00000333319 KIF2CQ99661 725 aa25.44■■□□□ 1.66
LINC01006-201ENST00000333319 STK31Q9BXU1 1019 aa25.43■■□□□ 1.66
LINC01006-201ENST00000333319 APBB1O00213 710 aa25.43■■□□□ 1.66
LINC01006-201ENST00000333319 TRHP20396 242 aaPredicted RBP25.43■■□□□ 1.66
LINC01006-201ENST00000333319 TTC22Q5TAA0 569 aa25.43■■□□□ 1.66
LINC01006-201ENST00000333319 NWD1Q149M9 1564 aa25.42■■□□□ 1.66
LINC01006-201ENST00000333319 CCT4P50991 539 aaKnown RBP25.42■■□□□ 1.66
LINC01006-201ENST00000333319 PHF8Q9UPP1 1060 aa25.42■■□□□ 1.66
LINC01006-201ENST00000333319 OTUD7AQ8TE49 926 aaPredicted RBP25.42■■□□□ 1.66
LINC01006-201ENST00000333319 SMARCA5O60264 1052 aaPredicted RBP25.41■■□□□ 1.66
LINC01006-201ENST00000333319 RBM33Q96EV2 1170 aaKnown RBP25.41■■□□□ 1.66
LINC01006-201ENST00000333319 IL17REQ8NFR9 667 aa25.4■■□□□ 1.66
LINC01006-201ENST00000333319 USP54Q70EL1 1684 aa25.4■■□□□ 1.66
LINC01006-201ENST00000333319 IL27Q8NEV9 243 aa25.4■■□□□ 1.66
LINC01006-201ENST00000333319 LRRC37A3O60309 1634 aa25.4■■□□□ 1.66
LINC01006-201ENST00000333319 ANKLE2Q86XL3 938 aa25.39■■□□□ 1.66
LINC01006-201ENST00000333319 MAP3K5Q99683 1374 aa25.39■■□□□ 1.66
LINC01006-201ENST00000333319 CCDC30Q5VVM6 783 aa25.39■■□□□ 1.65
LINC01006-201ENST00000333319 USHBP1Q8N6Y0 703 aa25.39■■□□□ 1.65
LINC01006-201ENST00000333319 NCOA3Q9Y6Q9 1424 aa25.38■■□□□ 1.65
LINC01006-201ENST00000333319 MCM4P33991 863 aa25.38■■□□□ 1.65
LINC01006-201ENST00000333319 NECTIN2Q92692 538 aa25.38■■□□□ 1.65
LINC01006-201ENST00000333319 HMMRO75330 724 aa25.38■■□□□ 1.65
LINC01006-201ENST00000333319 HSP90AB1P08238 724 aaKnown RBP25.37■■□□□ 1.65
LINC01006-201ENST00000333319 FLIIQ13045 1269 aa25.37■■□□□ 1.65
LINC01006-201ENST00000333319 CHD2O14647 1828 aaKnown RBP25.37■■□□□ 1.65
LINC01006-201ENST00000333319 FKBP5Q13451 457 aaPredicted RBP25.36■■□□□ 1.65
LINC01006-201ENST00000333319 TAF7Q15545 349 aaPredicted RBP25.36■■□□□ 1.65
LINC01006-201ENST00000333319 RBM42Q9BTD8 480 aaKnown RBP25.35■■□□□ 1.65
LINC01006-201ENST00000333319 BRPF3Q9ULD4 1205 aa25.35■■□□□ 1.65
LINC01006-201ENST00000333319 CD2BP2O95400 341 aaKnown RBP25.35■■□□□ 1.65
LINC01006-201ENST00000333319 DDIT3P35638 169 aa25.35■■□□□ 1.65
LINC01006-201ENST00000333319 GNAI2P04899 355 aa25.34■■□□□ 1.65
LINC01006-201ENST00000333319 LTN1O94822 1766 aa25.33■■□□□ 1.65
LINC01006-201ENST00000333319 EIF5BO60841 1220 aaKnown RBP25.33■■□□□ 1.65
LINC01006-201ENST00000333319 SDSP20132 328 aa25.33■■□□□ 1.65
LINC01006-201ENST00000333319 IP6K1Q92551 441 aa25.33■■□□□ 1.64
LINC01006-201ENST00000333319 FAM208AQ9UK61 1670 aaKnown RBP25.32■■□□□ 1.64
LINC01006-201ENST00000333319 ESCO1Q5FWF5 840 aa25.32■■□□□ 1.64
LINC01006-201ENST00000333319 BABAM1Q9NWV8 329 aa25.32■■□□□ 1.64
LINC01006-201ENST00000333319 PSME1Q06323 249 aa25.32■■□□□ 1.64
LINC01006-201ENST00000333319 SETD1BQ9UPS6 1966 aaKnown RBP25.31■■□□□ 1.64
LINC01006-201ENST00000333319 SOS1Q07889 1333 aaPredicted RBP25.3■■□□□ 1.64
LINC01006-201ENST00000333319 K7ELQ4 463 aaPredicted RBP25.3■■□□□ 1.64
LINC01006-201ENST00000333319 ZBTB7CA1YPR0 619 aa25.29■■□□□ 1.64
LINC01006-201ENST00000333319 NBPF6Q5VWK0 638 aa25.29■■□□□ 1.64
LINC01006-201ENST00000333319 NBPF4Q96M43 638 aa25.29■■□□□ 1.64
LINC01006-201ENST00000333319 DNAJC5Q9H3Z4 198 aa25.29■■□□□ 1.64
LINC01006-201ENST00000333319 HSP90AA1P07900 732 aaKnown RBP25.29■■□□□ 1.64
LINC01006-201ENST00000333319 GNAI3P08754 354 aa25.29■■□□□ 1.64
LINC01006-201ENST00000333319 CACNA1FO60840 1977 aa25.29■■□□□ 1.64
LINC01006-201ENST00000333319 USP26Q9BXU7 913 aa25.28■■□□□ 1.64
LINC01006-201ENST00000333319 EXOC6BQ9Y2D4 811 aa25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms