RNA–Protein interactions for RNA: ENST00000332966.8

SLIT3-201, Transcript of slit guidance ligand 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SLIT3, Length 4,895 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIT3-201ENST00000332966 ARHGAP45Q92619 1136 aa18.82■□□□□ 0.6
SLIT3-201ENST00000332966 C16orf45Q96MC5 204 aaPredicted RBP18.82■□□□□ 0.6
SLIT3-201ENST00000332966 SH2B1Q9NRF2 756 aaPredicted RBP18.82■□□□□ 0.6
SLIT3-201ENST00000332966 CSB-PGBD3P0DP91 1061 aa18.82■□□□□ 0.6
SLIT3-201ENST00000332966 SULT6B1Q6IMI4 303 aa18.82■□□□□ 0.6
SLIT3-201ENST00000332966 SAFBQ15424 915 aaKnown RBP eCLIP18.82■□□□□ 0.6
SLIT3-201ENST00000332966 CAMK4Q16566 473 aa18.82■□□□□ 0.6
SLIT3-201ENST00000332966 NSD2O96028 1365 aa18.81■□□□□ 0.6
SLIT3-201ENST00000332966 CASTP20810 708 aaKnown RBP18.81■□□□□ 0.6
SLIT3-201ENST00000332966 LIMCH1Q9UPQ0 1083 aa18.81■□□□□ 0.6
SLIT3-201ENST00000332966 SERPINC1P01008 464 aa18.81■□□□□ 0.6
SLIT3-201ENST00000332966 PAXBP1Q9Y5B6 917 aa18.81■□□□□ 0.6
SLIT3-201ENST00000332966 POLR3AO14802 1390 aaPredicted RBP18.81■□□□□ 0.6
SLIT3-201ENST00000332966 BLMP54132 1417 aaPredicted RBP18.81■□□□□ 0.6
SLIT3-201ENST00000332966 RALYLQ86SE5 291 aaKnown RBP18.81■□□□□ 0.6
SLIT3-201ENST00000332966 EID1Q9Y6B2 187 aa18.81■□□□□ 0.6
SLIT3-201ENST00000332966 UHRF1BP1Q6BDS2 1440 aa18.8■□□□□ 0.6
SLIT3-201ENST00000332966 EIF3JO75822 258 aaKnown RBP18.8■□□□□ 0.6
SLIT3-201ENST00000332966 HCLS1P14317 486 aaPredicted RBP18.8■□□□□ 0.6
SLIT3-201ENST00000332966 CWC27Q6UX04 472 aaKnown RBP18.8■□□□□ 0.6
SLIT3-201ENST00000332966 TMX3Q96JJ7 454 aa18.8■□□□□ 0.6
SLIT3-201ENST00000332966 RBM42Q9BTD8 480 aaKnown RBP18.8■□□□□ 0.6
SLIT3-201ENST00000332966 THUMPD2Q9BTF0 503 aaKnown RBP18.8■□□□□ 0.6
SLIT3-201ENST00000332966 ERLIN1O75477 346 aa18.8■□□□□ 0.6
SLIT3-201ENST00000332966 MAP4K4O95819 1239 aaPredicted RBP18.8■□□□□ 0.6
SLIT3-201ENST00000332966 CLIP2Q9UDT6 1046 aa18.8■□□□□ 0.6
SLIT3-201ENST00000332966 CBFA2T2O43439 604 aa18.8■□□□□ 0.6
SLIT3-201ENST00000332966 CCDC83Q8IWF9 413 aa18.8■□□□□ 0.6
SLIT3-201ENST00000332966 SPATA31E1Q6ZUB1 1445 aa18.8■□□□□ 0.6
SLIT3-201ENST00000332966 STK3Q13188 491 aa18.79■□□□□ 0.6
SLIT3-201ENST00000332966 CDK19Q9BWU1 502 aa18.79■□□□□ 0.6
SLIT3-201ENST00000332966 IL1RAPL2Q9NP60 686 aa18.79■□□□□ 0.6
SLIT3-201ENST00000332966 SNAPC4Q5SXM2 1469 aa18.79■□□□□ 0.6
SLIT3-201ENST00000332966 DHX16O60231 1041 aaKnown RBP18.79■□□□□ 0.6
SLIT3-201ENST00000332966 TNNQ9UQP3 1299 aa18.78■□□□□ 0.6
SLIT3-201ENST00000332966 STX6O43752 255 aa18.78■□□□□ 0.6
SLIT3-201ENST00000332966 FERMT3Q86UX7 667 aa18.78■□□□□ 0.6
SLIT3-201ENST00000332966 DDX19AQ9NUU7 478 aaKnown RBP18.78■□□□□ 0.6
SLIT3-201ENST00000332966 JMYQ8N9B5 988 aa18.78■□□□□ 0.6
SLIT3-201ENST00000332966 ZNF830Q96NB3 372 aaPredicted RBP18.78■□□□□ 0.6
SLIT3-201ENST00000332966 SPINK5Q9NQ38 1064 aaPredicted RBP18.78■□□□□ 0.6
SLIT3-201ENST00000332966 SFPQP23246 707 aaKnown RBP eCLIP18.77■□□□□ 0.6
SLIT3-201ENST00000332966 ZNF445P59923 1031 aa18.77■□□□□ 0.6
SLIT3-201ENST00000332966 H0YHG0 523 aa18.77■□□□□ 0.59
SLIT3-201ENST00000332966 PCMTD1Q96MG8 357 aaPredicted RBP18.77■□□□□ 0.59
SLIT3-201ENST00000332966 GPATCH8Q9UKJ3 1502 aaKnown RBP18.76■□□□□ 0.59
SLIT3-201ENST00000332966 KRT32Q14532 448 aa18.76■□□□□ 0.59
SLIT3-201ENST00000332966 IFT140Q96RY7 1462 aa18.76■□□□□ 0.59
SLIT3-201ENST00000332966 SMTNL1A8MU46 457 aa18.76■□□□□ 0.59
SLIT3-201ENST00000332966 HDGFL1Q5TGJ6 251 aa18.76■□□□□ 0.59
SLIT3-201ENST00000332966 NFXL1Q6ZNB6 911 aa18.76■□□□□ 0.59
SLIT3-201ENST00000332966 SRGAP3O43295 1099 aa18.76■□□□□ 0.59
SLIT3-201ENST00000332966 CAVIN2O95810 425 aa18.76■□□□□ 0.59
SLIT3-201ENST00000332966 ANO10Q9NW15 660 aa18.76■□□□□ 0.59
SLIT3-201ENST00000332966 ZMYM3Q14202 1370 aa18.76■□□□□ 0.59
SLIT3-201ENST00000332966 SMARCE1Q969G3 411 aa18.75■□□□□ 0.59
SLIT3-201ENST00000332966 RAB11FIP3O75154 756 aa18.75■□□□□ 0.59
SLIT3-201ENST00000332966 SDSP20132 328 aa18.75■□□□□ 0.59
SLIT3-201ENST00000332966 KRT222Q8N1A0 295 aa18.75■□□□□ 0.59
SLIT3-201ENST00000332966 FSD2A1L4K1 749 aa18.75■□□□□ 0.59
SLIT3-201ENST00000332966 APPP05067 770 aa18.75■□□□□ 0.59
SLIT3-201ENST00000332966 FILIP1LQ4L180 1135 aa18.75■□□□□ 0.59
SLIT3-201ENST00000332966 ZBTB40Q9NUA8 1239 aa18.75■□□□□ 0.59
SLIT3-201ENST00000332966 CCDC47Q96A33 483 aaKnown RBP18.75■□□□□ 0.59
SLIT3-201ENST00000332966 RBSNQ9H1K0 784 aa18.75■□□□□ 0.59
SLIT3-201ENST00000332966 KIF14Q15058 1648 aa18.75■□□□□ 0.59
SLIT3-201ENST00000332966 TTC12Q9H892 705 aaPredicted RBP18.74■□□□□ 0.59
SLIT3-201ENST00000332966 COL17A1Q9UMD9 1497 aaPredicted RBP18.74■□□□□ 0.59
SLIT3-201ENST00000332966 CTAGE5O15320 804 aa18.74■□□□□ 0.59
SLIT3-201ENST00000332966 GLRX3O76003 335 aaKnown RBP18.74■□□□□ 0.59
SLIT3-201ENST00000332966 ANAPC15P60006 121 aa18.74■□□□□ 0.59
SLIT3-201ENST00000332966 RIC3Q7Z5B4 369 aa18.74■□□□□ 0.59
SLIT3-201ENST00000332966 KIF1BPQ96EK5 621 aa18.74■□□□□ 0.59
SLIT3-201ENST00000332966 BMS1Q14692 1282 aaKnown RBP18.73■□□□□ 0.59
SLIT3-201ENST00000332966 TIGD1Q96MW7 591 aa18.73■□□□□ 0.59
SLIT3-201ENST00000332966 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.73■□□□□ 0.59
SLIT3-201ENST00000332966 NUTM1Q86Y26 1132 aa18.73■□□□□ 0.59
SLIT3-201ENST00000332966 CKAP2LQ8IYA6 745 aa18.73■□□□□ 0.59
SLIT3-201ENST00000332966 PLB1Q6P1J6 1458 aa18.73■□□□□ 0.59
SLIT3-201ENST00000332966 USP48Q86UV5 1035 aa18.73■□□□□ 0.59
SLIT3-201ENST00000332966 NEUROD6Q96NK8 337 aa18.73■□□□□ 0.59
SLIT3-201ENST00000332966 FAM177A1Q8N128 213 aaPredicted RBP18.73■□□□□ 0.59
SLIT3-201ENST00000332966 PTPRCP08575 1304 aa18.72■□□□□ 0.59
SLIT3-201ENST00000332966 GSDMDP57764 484 aa18.72■□□□□ 0.59
SLIT3-201ENST00000332966 ZSCAN22P10073 491 aaPredicted RBP18.72■□□□□ 0.59
SLIT3-201ENST00000332966 CEP135Q66GS9 1140 aa18.72■□□□□ 0.59
SLIT3-201ENST00000332966 CAGE1Q8TC20 777 aa18.72■□□□□ 0.59
SLIT3-201ENST00000332966 ZNF692Q9BU19 519 aaPredicted RBP18.72■□□□□ 0.59
SLIT3-201ENST00000332966 ADGRF5Q8IZF2 1346 aa18.72■□□□□ 0.59
SLIT3-201ENST00000332966 CDR1P51861 262 aa18.72■□□□□ 0.59
SLIT3-201ENST00000332966 FEZ1Q99689 392 aa18.72■□□□□ 0.59
SLIT3-201ENST00000332966 PZPP20742 1482 aa18.71■□□□□ 0.59
SLIT3-201ENST00000332966 ZNF165P49910 485 aa18.71■□□□□ 0.59
SLIT3-201ENST00000332966 PRPF40BQ6NWY9 871 aaKnown RBP18.71■□□□□ 0.59
SLIT3-201ENST00000332966 GIMAP6Q6P9H5 292 aa18.71■□□□□ 0.59
SLIT3-201ENST00000332966 PPP1R9BQ96SB3 815 aa18.71■□□□□ 0.59
SLIT3-201ENST00000332966 RDXP35241 583 aaKnown RBP18.71■□□□□ 0.59
SLIT3-201ENST00000332966 TTC5Q8N0Z6 440 aa18.71■□□□□ 0.59
SLIT3-201ENST00000332966 NOL10Q9BSC4 688 aaKnown RBP18.71■□□□□ 0.59
SLIT3-201ENST00000332966 DACH1Q9UI36 760 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms