RNA–Protein interactions for RNA: ENST00000330688.8

RARB-201, Transcript of retinoic acid receptor beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RARB, Length 3,084 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARB-201ENST00000330688 MTHFSDQ2M296 383 aaKnown RBP12.53□□□□□ -0.4
RARB-201ENST00000330688 DDIT3P35638 169 aa12.52□□□□□ -0.4
RARB-201ENST00000330688 C16orf71Q8IYS4 520 aaPredicted RBP12.52□□□□□ -0.4
RARB-201ENST00000330688 ANKRD44Q8N8A2 993 aa12.52□□□□□ -0.4
RARB-201ENST00000330688 TBX22Q9Y458 520 aa12.52□□□□□ -0.41
RARB-201ENST00000330688 TTC21AQ8NDW8 1320 aa12.52□□□□□ -0.41
RARB-201ENST00000330688 PLPPR3Q6T4P5 718 aa12.51□□□□□ -0.41
RARB-201ENST00000330688 ATP10DQ9P241 1426 aa12.51□□□□□ -0.41
RARB-201ENST00000330688 NCOA3Q9Y6Q9 1424 aa12.51□□□□□ -0.41
RARB-201ENST00000330688 RGPD1P0DJD0 1748 aa12.51□□□□□ -0.41
RARB-201ENST00000330688 NALCNQ8IZF0 1738 aa12.51□□□□□ -0.41
RARB-201ENST00000330688 SLC4A2P04920 1241 aa12.51□□□□□ -0.41
RARB-201ENST00000330688 CEP85Q6P2H3 762 aa12.51□□□□□ -0.41
RARB-201ENST00000330688 ARHGEF10O15013 1369 aa12.51□□□□□ -0.41
RARB-201ENST00000330688 CD2BP2O95400 341 aaKnown RBP12.51□□□□□ -0.41
RARB-201ENST00000330688 RPAP2Q8IXW5 612 aaPredicted RBP12.51□□□□□ -0.41
RARB-201ENST00000330688 NGDNQ8NEJ9 315 aaKnown RBP12.51□□□□□ -0.41
RARB-201ENST00000330688 MEIS3Q99687 375 aa12.51□□□□□ -0.41
RARB-201ENST00000330688 PTPRCP08575 1304 aa12.5□□□□□ -0.41
RARB-201ENST00000330688 EYA1Q99502 592 aa12.5□□□□□ -0.41
RARB-201ENST00000330688 RTL1A6NKG5 1358 aa12.5□□□□□ -0.41
RARB-201ENST00000330688 MSH6P52701 1360 aa12.5□□□□□ -0.41
RARB-201ENST00000330688 CDC45O75419 566 aa12.5□□□□□ -0.41
RARB-201ENST00000330688 RBM42Q9BTD8 480 aaKnown RBP12.5□□□□□ -0.41
RARB-201ENST00000330688 SBNO1A3KN83 1393 aa12.5□□□□□ -0.41
RARB-201ENST00000330688 FLT4P35916 1363 aa12.5□□□□□ -0.41
RARB-201ENST00000330688 G2E3Q7L622 706 aa12.49□□□□□ -0.41
RARB-201ENST00000330688 OTUD7AQ8TE49 926 aaPredicted RBP12.49□□□□□ -0.41
RARB-201ENST00000330688 AMPHP49418 695 aa12.49□□□□□ -0.41
RARB-201ENST00000330688 TSPYL4Q9UJ04 414 aa12.49□□□□□ -0.41
RARB-201ENST00000330688 TTC22Q5TAA0 569 aa12.48□□□□□ -0.41
RARB-201ENST00000330688 RTF1Q92541 710 aaKnown RBP12.48□□□□□ -0.41
RARB-201ENST00000330688 KDRP35968 1356 aa12.48□□□□□ -0.41
RARB-201ENST00000330688 ARHGAP23Q9P227 1491 aa12.48□□□□□ -0.41
RARB-201ENST00000330688 IGSF1Q8N6C5 1336 aa12.48□□□□□ -0.41
RARB-201ENST00000330688 SMARCA5O60264 1052 aaPredicted RBP12.48□□□□□ -0.41
RARB-201ENST00000330688 HSP90AB1P08238 724 aaKnown RBP12.48□□□□□ -0.41
RARB-201ENST00000330688 SLIT1O75093 1534 aa12.47□□□□□ -0.41
RARB-201ENST00000330688 F6X3S4 739 aa12.47□□□□□ -0.41
RARB-201ENST00000330688 APBB1O00213 710 aa12.47□□□□□ -0.41
RARB-201ENST00000330688 CEP170BQ9Y4F5 1589 aaPredicted RBP12.47□□□□□ -0.41
RARB-201ENST00000330688 TRAK2O60296 914 aa12.46□□□□□ -0.41
RARB-201ENST00000330688 NLRP6P59044 892 aa12.46□□□□□ -0.41
RARB-201ENST00000330688 SLC4A10Q6U841 1118 aa12.46□□□□□ -0.41
RARB-201ENST00000330688 GZF1Q9H116 711 aaPredicted RBP12.46□□□□□ -0.41
RARB-201ENST00000330688 DIP2AQ14689 1571 aa12.46□□□□□ -0.42
RARB-201ENST00000330688 NUTM2GQ5VZR2 741 aa12.46□□□□□ -0.42
RARB-201ENST00000330688 GAS2L2Q8NHY3 880 aa12.46□□□□□ -0.42
RARB-201ENST00000330688 RIMS1Q86UR5 1692 aaKnown RBP12.45□□□□□ -0.42
RARB-201ENST00000330688 K7ELQ4 463 aaPredicted RBP12.45□□□□□ -0.42
RARB-201ENST00000330688 THEMISQ8N1K5 641 aaPredicted RBP12.45□□□□□ -0.42
RARB-201ENST00000330688 FOXD4L1Q9NU39 408 aa12.45□□□□□ -0.42
RARB-201ENST00000330688 TNPO1Q92973 898 aaKnown RBP12.45□□□□□ -0.42
RARB-201ENST00000330688 CIZ1Q9ULV3 898 aaPredicted RBP12.45□□□□□ -0.42
RARB-201ENST00000330688 KCNA6P17658 529 aa12.44□□□□□ -0.42
RARB-201ENST00000330688 SDSP20132 328 aa12.44□□□□□ -0.42
RARB-201ENST00000330688 HOXC9P31274 260 aa12.43□□□□□ -0.42
RARB-201ENST00000330688 RAB3GAP1Q15042 981 aa12.43□□□□□ -0.42
RARB-201ENST00000330688 USP26Q9BXU7 913 aa12.43□□□□□ -0.42
RARB-201ENST00000330688 RGPD8O14715 1765 aaPredicted RBP12.43□□□□□ -0.42
RARB-201ENST00000330688 FSD2A1L4K1 749 aa12.43□□□□□ -0.42
RARB-201ENST00000330688 CCT4P50991 539 aaKnown RBP12.43□□□□□ -0.42
RARB-201ENST00000330688 L1TD1Q5T7N2 865 aaKnown RBP12.43□□□□□ -0.42
RARB-201ENST00000330688 PIK3C2AO00443 1686 aa12.43□□□□□ -0.42
RARB-201ENST00000330688 DDX11L8A8MPP1 907 aa12.43□□□□□ -0.42
RARB-201ENST00000330688 HTATSF1O43719 755 aaKnown RBP12.42□□□□□ -0.42
RARB-201ENST00000330688 ARXQ96QS3 562 aa12.42□□□□□ -0.42
RARB-201ENST00000330688 GNAT3A8MTJ3 354 aa12.42□□□□□ -0.42
RARB-201ENST00000330688 HSP90AA1P07900 732 aaKnown RBP12.42□□□□□ -0.42
RARB-201ENST00000330688 IL17REQ8NFR9 667 aa12.42□□□□□ -0.42
RARB-201ENST00000330688 FMN2Q9NZ56 1722 aa12.42□□□□□ -0.42
RARB-201ENST00000330688 XRCC6P12956 609 aaKnown RBP eCLIP12.41□□□□□ -0.42
RARB-201ENST00000330688 NECTIN2Q92692 538 aa12.41□□□□□ -0.42
RARB-201ENST00000330688 STK31Q9BXU1 1019 aa12.41□□□□□ -0.42
RARB-201ENST00000330688 GOLGA6L3A6NEY3 463 aa12.41□□□□□ -0.42
RARB-201ENST00000330688 HMMRO75330 724 aa12.41□□□□□ -0.42
RARB-201ENST00000330688 FLIIQ13045 1269 aa12.41□□□□□ -0.42
RARB-201ENST00000330688 LTV1Q96GA3 475 aaPredicted RBP12.41□□□□□ -0.42
RARB-201ENST00000330688 ABTB2Q8N961 1025 aa12.41□□□□□ -0.42
RARB-201ENST00000330688 GNAI2P04899 355 aa12.4□□□□□ -0.42
RARB-201ENST00000330688 RABEP1Q15276 862 aa12.4□□□□□ -0.42
RARB-201ENST00000330688 ANKARQ7Z5J8 1434 aa12.4□□□□□ -0.42
RARB-201ENST00000330688 EIF5BO60841 1220 aaKnown RBP12.4□□□□□ -0.42
RARB-201ENST00000330688 CCDC30Q5VVM6 783 aa12.4□□□□□ -0.42
RARB-201ENST00000330688 NWD1Q149M9 1564 aa12.4□□□□□ -0.43
RARB-201ENST00000330688 PDE1AP54750 535 aa12.39□□□□□ -0.43
RARB-201ENST00000330688 FKBP5Q13451 457 aaPredicted RBP12.39□□□□□ -0.43
RARB-201ENST00000330688 EXOC6BQ9Y2D4 811 aa12.39□□□□□ -0.43
RARB-201ENST00000330688 OSBPL3Q9H4L5 887 aa12.39□□□□□ -0.43
RARB-201ENST00000330688 USHBP1Q8N6Y0 703 aa12.39□□□□□ -0.43
RARB-201ENST00000330688 GBP4Q96PP9 640 aa12.39□□□□□ -0.43
RARB-201ENST00000330688 ANO8Q9HCE9 1232 aaPredicted RBP12.39□□□□□ -0.43
RARB-201ENST00000330688 XRN1Q8IZH2 1706 aaKnown RBP12.38□□□□□ -0.43
RARB-201ENST00000330688 PNMA6EA0A0J9YXQ4 647 aa12.38□□□□□ -0.43
RARB-201ENST00000330688 SSFA2P28290 1259 aa12.38□□□□□ -0.43
RARB-201ENST00000330688 TAF7Q15545 349 aaPredicted RBP12.38□□□□□ -0.43
RARB-201ENST00000330688 CASC1Q6TDU7 716 aa12.38□□□□□ -0.43
RARB-201ENST00000330688 PANK2Q9BZ23 570 aa12.38□□□□□ -0.43
RARB-201ENST00000330688 MAP3K5Q99683 1374 aa12.38□□□□□ -0.43
RARB-201ENST00000330688 TSHZ3Q63HK5 1081 aa12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms