RNA–Protein interactions for RNA: ENST00000330045.11

BRCC3-201, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene BRCC3, Length 2,496 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-201ENST00000330045 DDX11L8A8MPP1 907 aa19.14■□□□□ 0.65
BRCC3-201ENST00000330045 FSD2A1L4K1 749 aa19.13■□□□□ 0.65
BRCC3-201ENST00000330045 PLEKHG3A1L390 1219 aa19.12■□□□□ 0.65
BRCC3-201ENST00000330045 CIZ1Q9ULV3 898 aaPredicted RBP19.12■□□□□ 0.65
BRCC3-201ENST00000330045 TTC21BQ7Z4L5 1316 aa19.12■□□□□ 0.65
BRCC3-201ENST00000330045 SOX12O15370 315 aa19.12■□□□□ 0.65
BRCC3-201ENST00000330045 XRCC6P12956 609 aaKnown RBP eCLIP19.11■□□□□ 0.65
BRCC3-201ENST00000330045 ARXQ96QS3 562 aa19.11■□□□□ 0.65
BRCC3-201ENST00000330045 CDC45O75419 566 aa19.1■□□□□ 0.65
BRCC3-201ENST00000330045 EIF4A2Q14240 407 aaKnown RBP19.1■□□□□ 0.65
BRCC3-201ENST00000330045 INTS3Q68E01 1043 aaKnown RBP19.1■□□□□ 0.65
BRCC3-201ENST00000330045 SULT6B1Q6IMI4 303 aa19.1■□□□□ 0.65
BRCC3-201ENST00000330045 DCTPP1Q9H773 170 aa19.1■□□□□ 0.65
BRCC3-201ENST00000330045 USP6P35125 1406 aa19.1■□□□□ 0.65
BRCC3-201ENST00000330045 HAP1P54257 671 aaPredicted RBP19.09■□□□□ 0.65
BRCC3-201ENST00000330045 AEBP1Q8IUX7 1158 aa19.09■□□□□ 0.65
BRCC3-201ENST00000330045 NPHP4O75161 1426 aaPredicted RBP19.09■□□□□ 0.65
BRCC3-201ENST00000330045 PLEKHM2Q8IWE5 1019 aa19.09■□□□□ 0.65
BRCC3-201ENST00000330045 TNPO1Q92973 898 aaKnown RBP19.09■□□□□ 0.65
BRCC3-201ENST00000330045 CHD2O14647 1828 aaKnown RBP19.09■□□□□ 0.65
BRCC3-201ENST00000330045 K7ELQ4 463 aaPredicted RBP19.08■□□□□ 0.64
BRCC3-201ENST00000330045 CD2BP2O95400 341 aaKnown RBP19.08■□□□□ 0.64
BRCC3-201ENST00000330045 HSP90AA1P07900 732 aaKnown RBP19.08■□□□□ 0.64
BRCC3-201ENST00000330045 GSPT1P15170 499 aaKnown RBP19.08■□□□□ 0.64
BRCC3-201ENST00000330045 OVOS2A0A0J9YW53 1432 aa19.07■□□□□ 0.64
BRCC3-201ENST00000330045 OVOS2Q6IE36 1432 aa19.07■□□□□ 0.64
BRCC3-201ENST00000330045 CHL1O00533 1208 aa19.07■□□□□ 0.64
BRCC3-201ENST00000330045 RAB3GAP1Q15042 981 aa19.07■□□□□ 0.64
BRCC3-201ENST00000330045 NGDNQ8NEJ9 315 aaKnown RBP19.07■□□□□ 0.64
BRCC3-201ENST00000330045 NALCNQ8IZF0 1738 aa19.06■□□□□ 0.64
BRCC3-201ENST00000330045 RGPD1P0DJD0 1748 aa19.06■□□□□ 0.64
BRCC3-201ENST00000330045 EIF5BO60841 1220 aaKnown RBP19.06■□□□□ 0.64
BRCC3-201ENST00000330045 KRT24Q2M2I5 525 aa19.06■□□□□ 0.64
BRCC3-201ENST00000330045 GBP4Q96PP9 640 aa19.06■□□□□ 0.64
BRCC3-201ENST00000330045 RBM42Q9BTD8 480 aaKnown RBP19.06■□□□□ 0.64
BRCC3-201ENST00000330045 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.06■□□□□ 0.64
BRCC3-201ENST00000330045 RGS12O14924 1447 aa19.06■□□□□ 0.64
BRCC3-201ENST00000330045 HSPA2P54652 639 aa19.06■□□□□ 0.64
BRCC3-201ENST00000330045 ANKRD44Q8N8A2 993 aa19.06■□□□□ 0.64
BRCC3-201ENST00000330045 NUTM2GQ5VZR2 741 aa19.05■□□□□ 0.64
BRCC3-201ENST00000330045 SSH2Q76I76 1423 aa19.05■□□□□ 0.64
BRCC3-201ENST00000330045 MCM10Q7L590 875 aa19.05■□□□□ 0.64
BRCC3-201ENST00000330045 RPAP2Q8IXW5 612 aaPredicted RBP19.05■□□□□ 0.64
BRCC3-201ENST00000330045 PEAK1Q9H792 1746 aa19.04■□□□□ 0.64
BRCC3-201ENST00000330045 MRE11P49959 708 aa19.04■□□□□ 0.64
BRCC3-201ENST00000330045 TTC22Q5TAA0 569 aa19.04■□□□□ 0.64
BRCC3-201ENST00000330045 KIAA0232Q92628 1395 aa19.04■□□□□ 0.64
BRCC3-201ENST00000330045 PANK2Q9BZ23 570 aa19.03■□□□□ 0.64
BRCC3-201ENST00000330045 FOXD4L1Q9NU39 408 aa19.03■□□□□ 0.64
BRCC3-201ENST00000330045 ATP10DQ9P241 1426 aa19.03■□□□□ 0.64
BRCC3-201ENST00000330045 C16orf71Q8IYS4 520 aaPredicted RBP19.03■□□□□ 0.64
BRCC3-201ENST00000330045 PTPRCP08575 1304 aa19.03■□□□□ 0.64
BRCC3-201ENST00000330045 CEP85Q6P2H3 762 aa19.02■□□□□ 0.64
BRCC3-201ENST00000330045 HSP90AB2PQ58FF8 381 aa19.01■□□□□ 0.63
BRCC3-201ENST00000330045 RRAGDQ9NQL2 400 aaPredicted RBP19.01■□□□□ 0.63
BRCC3-201ENST00000330045 ISY1Q9ULR0 285 aaKnown RBP19.01■□□□□ 0.63
BRCC3-201ENST00000330045 FMN2Q9NZ56 1722 aa19.01■□□□□ 0.63
BRCC3-201ENST00000330045 PTMSP20962 102 aa19.01■□□□□ 0.63
BRCC3-201ENST00000330045 USP31Q70CQ4 1352 aa19.01■□□□□ 0.63
BRCC3-201ENST00000330045 GAS2L2Q8NHY3 880 aa19■□□□□ 0.63
BRCC3-201ENST00000330045 SKOR2Q2VWA4 1001 aaPredicted RBP19■□□□□ 0.63
BRCC3-201ENST00000330045 C14orf37Q86TY3 774 aa19■□□□□ 0.63
BRCC3-201ENST00000330045 RTL1A6NKG5 1358 aa19■□□□□ 0.63
BRCC3-201ENST00000330045 MSH6P52701 1360 aa19■□□□□ 0.63
BRCC3-201ENST00000330045 GRPEL1Q9HAV7 217 aa18.99■□□□□ 0.63
BRCC3-201ENST00000330045 RABEP1Q15276 862 aa18.99■□□□□ 0.63
BRCC3-201ENST00000330045 CRB1P82279 1406 aa18.99■□□□□ 0.63
BRCC3-201ENST00000330045 MEIS3Q99687 375 aa18.98■□□□□ 0.63
BRCC3-201ENST00000330045 SLC4A2P04920 1241 aa18.98■□□□□ 0.63
BRCC3-201ENST00000330045 OTUD7AQ8TE49 926 aaPredicted RBP18.98■□□□□ 0.63
BRCC3-201ENST00000330045 USP26Q9BXU7 913 aa18.98■□□□□ 0.63
BRCC3-201ENST00000330045 KDM4FA0A1W2PPD8 638 aa18.97■□□□□ 0.63
BRCC3-201ENST00000330045 PIK3C2AO00443 1686 aa18.96■□□□□ 0.63
BRCC3-201ENST00000330045 ORAI2Q96SN7 254 aa18.96■□□□□ 0.63
BRCC3-201ENST00000330045 ANKARQ7Z5J8 1434 aa18.96■□□□□ 0.63
BRCC3-201ENST00000330045 ADGRL3Q9HAR2 1447 aa18.96■□□□□ 0.63
BRCC3-201ENST00000330045 SMARCA5O60264 1052 aaPredicted RBP18.96■□□□□ 0.63
BRCC3-201ENST00000330045 SDSP20132 328 aa18.96■□□□□ 0.63
BRCC3-201ENST00000330045 SSFA2P28290 1259 aa18.96■□□□□ 0.63
BRCC3-201ENST00000330045 XPCQ01831 940 aaPredicted RBP18.96■□□□□ 0.63
BRCC3-201ENST00000330045 ESCO1Q5FWF5 840 aa18.96■□□□□ 0.63
BRCC3-201ENST00000330045 PHF8Q9UPP1 1060 aa18.96■□□□□ 0.63
BRCC3-201ENST00000330045 ARHGEF10O15013 1369 aa18.95■□□□□ 0.62
BRCC3-201ENST00000330045 APBB1O00213 710 aa18.95■□□□□ 0.62
BRCC3-201ENST00000330045 PLEKHG5O94827 1062 aa18.95■□□□□ 0.62
BRCC3-201ENST00000330045 CASC1Q6TDU7 716 aa18.95■□□□□ 0.62
BRCC3-201ENST00000330045 NLRP6P59044 892 aa18.95■□□□□ 0.62
BRCC3-201ENST00000330045 MIS18AQ9NYP9 233 aa18.95■□□□□ 0.62
BRCC3-201ENST00000330045 MAP3K19Q56UN5 1328 aa18.95■□□□□ 0.62
BRCC3-201ENST00000330045 CLEC17AQ6ZS10 378 aa18.94■□□□□ 0.62
BRCC3-201ENST00000330045 GOLGA6L22H0YM25 854 aa18.94■□□□□ 0.62
BRCC3-201ENST00000330045 PROSER2Q86WR7 435 aaPredicted RBP18.94■□□□□ 0.62
BRCC3-201ENST00000330045 RTF1Q92541 710 aaKnown RBP18.94■□□□□ 0.62
BRCC3-201ENST00000330045 HMMRO75330 724 aa18.93■□□□□ 0.62
BRCC3-201ENST00000330045 TSPYL4Q9UJ04 414 aa18.93■□□□□ 0.62
BRCC3-201ENST00000330045 TTC21AQ8NDW8 1320 aa18.93■□□□□ 0.62
BRCC3-201ENST00000330045 MTHFSDQ2M296 383 aaKnown RBP18.93■□□□□ 0.62
BRCC3-201ENST00000330045 FOXO3O43524 673 aa18.92■□□□□ 0.62
BRCC3-201ENST00000330045 ABTB2Q8N961 1025 aa18.92■□□□□ 0.62
BRCC3-201ENST00000330045 GAS2L3Q86XJ1 694 aa18.92■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms