RNA–Protein interactions for RNA: ENST00000328895.8

GKN2-201, Transcript of gastrokine 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GKN2, Length 800 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GKN2-201ENST00000328895 KDF1Q8NAX2 398 aaPredicted RBP11.32□□□□□ -0.6
GKN2-201ENST00000328895 GLMNQ92990 594 aa11.31□□□□□ -0.6
GKN2-201ENST00000328895 INSM2Q96T92 566 aaPredicted RBP11.31□□□□□ -0.6
GKN2-201ENST00000328895 OSBPL3Q9H4L5 887 aa11.31□□□□□ -0.6
GKN2-201ENST00000328895 CHIC2Q9UKJ5 165 aa11.31□□□□□ -0.6
GKN2-201ENST00000328895 TRAK2O60296 914 aa11.3□□□□□ -0.6
GKN2-201ENST00000328895 MAN1A2O60476 641 aa11.3□□□□□ -0.6
GKN2-201ENST00000328895 USP4Q13107 963 aa11.3□□□□□ -0.6
GKN2-201ENST00000328895 MAP7D1Q3KQU3 841 aa11.3□□□□□ -0.6
GKN2-201ENST00000328895 CYP2U1Q7Z449 544 aa11.3□□□□□ -0.6
GKN2-201ENST00000328895 POLMQ9NP87 494 aaPredicted RBP11.3□□□□□ -0.6
GKN2-201ENST00000328895 TTLL8A6PVC2 850 aa11.29□□□□□ -0.6
GKN2-201ENST00000328895 ZNF777Q9ULD5 760 aaPredicted RBP11.29□□□□□ -0.6
GKN2-201ENST00000328895 SOS2Q07890 1332 aaPredicted RBP11.29□□□□□ -0.6
GKN2-201ENST00000328895 FIGNL2A6NMB9 653 aa11.28□□□□□ -0.6
GKN2-201ENST00000328895 CTSOP43234 321 aaPredicted RBP11.28□□□□□ -0.6
GKN2-201ENST00000328895 CALR3Q96L12 384 aaKnown RBP11.28□□□□□ -0.6
GKN2-201ENST00000328895 ZMYND15Q9H091 742 aa11.28□□□□□ -0.6
GKN2-201ENST00000328895 MEN1O00255 615 aa11.27□□□□□ -0.61
GKN2-201ENST00000328895 UCN2Q96RP3 112 aa11.27□□□□□ -0.61
GKN2-201ENST00000328895 ARHGEF10LQ9HCE6 1279 aa11.27□□□□□ -0.61
GKN2-201ENST00000328895 DNMT3LQ9UJW3 386 aa11.27□□□□□ -0.61
GKN2-201ENST00000328895 A0A1W2PRU2 124 aa11.26□□□□□ -0.61
GKN2-201ENST00000328895 DEPDC4Q8N2C3 294 aa11.26□□□□□ -0.61
GKN2-201ENST00000328895 ZNF775Q96BV0 537 aaPredicted RBP11.26□□□□□ -0.61
GKN2-201ENST00000328895 SIRT1Q96EB6 747 aa11.26□□□□□ -0.61
GKN2-201ENST00000328895 TBC1D9Q6ZT07 1266 aa11.25□□□□□ -0.61
GKN2-201ENST00000328895 NFATC2IPQ8NCF5 419 aa11.25□□□□□ -0.61
GKN2-201ENST00000328895 RAB6BQ9NRW1 208 aa11.25□□□□□ -0.61
GKN2-201ENST00000328895 USP17L5A8MUK1 530 aa11.24□□□□□ -0.61
GKN2-201ENST00000328895 NCOA4Q13772 614 aa11.23□□□□□ -0.61
GKN2-201ENST00000328895 EML3Q32P44 896 aa11.23□□□□□ -0.61
GKN2-201ENST00000328895 NLRP3Q96P20 1036 aa11.23□□□□□ -0.61
GKN2-201ENST00000328895 GNRH1P01148 92 aa11.22□□□□□ -0.61
GKN2-201ENST00000328895 ZNF800Q2TB10 664 aaPredicted RBP eCLIP11.22□□□□□ -0.61
GKN2-201ENST00000328895 FOXD4L5Q5VV16 416 aaPredicted RBP11.22□□□□□ -0.61
GKN2-201ENST00000328895 STAU1O95793 577 aaKnown RBP11.21□□□□□ -0.61
GKN2-201ENST00000328895 CLN3Q13286 438 aa11.21□□□□□ -0.61
GKN2-201ENST00000328895 C14orf37Q86TY3 774 aa11.21□□□□□ -0.61
GKN2-201ENST00000328895 RNF217Q8TC41 542 aa11.21□□□□□ -0.61
GKN2-201ENST00000328895 ATP9BO43861 1147 aa11.2□□□□□ -0.62
GKN2-201ENST00000328895 TFIP11Q9UBB9 837 aaKnown RBP11.2□□□□□ -0.62
GKN2-201ENST00000328895 NOD1Q9Y239 953 aa11.2□□□□□ -0.62
GKN2-201ENST00000328895 USP17L3A6NCW0 530 aa11.19□□□□□ -0.62
GKN2-201ENST00000328895 USP17L4A6NCW7 530 aa11.19□□□□□ -0.62
GKN2-201ENST00000328895 LZTS3O60299 673 aaPredicted RBP11.19□□□□□ -0.62
GKN2-201ENST00000328895 RNF144AP50876 292 aaPredicted RBP11.19□□□□□ -0.62
GKN2-201ENST00000328895 USP17L2Q6R6M4 530 aa11.19□□□□□ -0.62
GKN2-201ENST00000328895 USP17L1Q7RTZ2 530 aa11.19□□□□□ -0.62
GKN2-201ENST00000328895 CNKSR1Q969H4 720 aa11.19□□□□□ -0.62
GKN2-201ENST00000328895 IL2RAP01589 272 aa11.18□□□□□ -0.62
GKN2-201ENST00000328895 SLC27A3Q5K4L6 730 aa11.18□□□□□ -0.62
GKN2-201ENST00000328895 PRICKLE2Q7Z3G6 844 aa11.18□□□□□ -0.62
GKN2-201ENST00000328895 VEGFBP49765 207 aa11.17□□□□□ -0.62
GKN2-201ENST00000328895 ESCO1Q5FWF5 840 aa11.17□□□□□ -0.62
GKN2-201ENST00000328895 LYSMD3Q7Z3D4 306 aa11.17□□□□□ -0.62
GKN2-201ENST00000328895 ESYT1Q9BSJ8 1104 aa11.17□□□□□ -0.62
GKN2-201ENST00000328895 ETNK1Q9HBU6 452 aa11.17□□□□□ -0.62
GKN2-201ENST00000328895 NXF1Q9UBU9 619 aaKnown RBP11.17□□□□□ -0.62
GKN2-201ENST00000328895 PALM3A6NDB9 673 aaPredicted RBP11.16□□□□□ -0.62
GKN2-201ENST00000328895 GTF2IP78347 998 aa11.16□□□□□ -0.62
GKN2-201ENST00000328895 PSME1Q06323 249 aa11.16□□□□□ -0.62
GKN2-201ENST00000328895 PLEKHM2Q8IWE5 1019 aa11.16□□□□□ -0.62
GKN2-201ENST00000328895 PPP1R12CQ9BZL4 782 aa11.16□□□□□ -0.62
GKN2-201ENST00000328895 PCDHGA11Q9Y5H2 935 aa11.16□□□□□ -0.62
GKN2-201ENST00000328895 TERTO14746 1132 aaKnown RBP11.15□□□□□ -0.62
GKN2-201ENST00000328895 GPC1P35052 558 aa11.15□□□□□ -0.62
GKN2-201ENST00000328895 CENPCQ03188 943 aa11.15□□□□□ -0.62
GKN2-201ENST00000328895 PTSQ03393 145 aa11.15□□□□□ -0.62
GKN2-201ENST00000328895 MAFBQ9Y5Q3 323 aaPredicted RBP11.15□□□□□ -0.62
GKN2-201ENST00000328895 RHOQP17081 205 aa11.14□□□□□ -0.63
GKN2-201ENST00000328895 SCNN1DP51172 638 aa11.14□□□□□ -0.63
GKN2-201ENST00000328895 GDF10P55107 478 aa11.14□□□□□ -0.63
GKN2-201ENST00000328895 XAGE2Q96GT9 111 aa11.14□□□□□ -0.63
GKN2-201ENST00000328895 MKRN1Q9UHC7 482 aaKnown RBP11.13□□□□□ -0.63
GKN2-201ENST00000328895 LMOD1P29536 600 aaPredicted RBP11.12□□□□□ -0.63
GKN2-201ENST00000328895 TRIM50Q86XT4 487 aa11.12□□□□□ -0.63
GKN2-201ENST00000328895 GRIP2Q9C0E4 1043 aa11.12□□□□□ -0.63
GKN2-201ENST00000328895 SERTAD1Q9UHV2 236 aa11.12□□□□□ -0.63
GKN2-201ENST00000328895 ARID3CA6NKF2 412 aa11.11□□□□□ -0.63
GKN2-201ENST00000328895 INHAP05111 366 aa11.11□□□□□ -0.63
GKN2-201ENST00000328895 POU4F2Q12837 409 aa11.11□□□□□ -0.63
GKN2-201ENST00000328895 ZSCAN10Q96SZ4 725 aaPredicted RBP11.11□□□□□ -0.63
GKN2-201ENST00000328895 TMEM229AB2RXF0 380 aa11.1□□□□□ -0.63
GKN2-201ENST00000328895 PPFIA3O75145 1194 aa11.1□□□□□ -0.63
GKN2-201ENST00000328895 WFS1O76024 890 aa11.1□□□□□ -0.63
GKN2-201ENST00000328895 CLDN10P78369 228 aa11.1□□□□□ -0.63
GKN2-201ENST00000328895 NFX1Q12986 1120 aaKnown RBP11.1□□□□□ -0.63
GKN2-201ENST00000328895 TLR1Q15399 786 aa11.1□□□□□ -0.63
GKN2-201ENST00000328895 CCDC155Q8N6L0 562 aa11.1□□□□□ -0.63
GKN2-201ENST00000328895 SLC16A10Q8TF71 515 aa11.1□□□□□ -0.63
GKN2-201ENST00000328895 HRH3Q9Y5N1 445 aa11.1□□□□□ -0.63
GKN2-201ENST00000328895 ATP1A2P50993 1020 aa11.09□□□□□ -0.63
GKN2-201ENST00000328895 TMEM214Q6NUQ4 689 aaKnown RBP11.09□□□□□ -0.63
GKN2-201ENST00000328895 TREML4Q6UXN2 200 aa11.09□□□□□ -0.63
GKN2-201ENST00000328895 OGFOD1Q8N543 542 aa11.09□□□□□ -0.63
GKN2-201ENST00000328895 FHDC1Q9C0D6 1143 aaPredicted RBP11.09□□□□□ -0.63
GKN2-201ENST00000328895 SLC35F4A4IF30 521 aa11.08□□□□□ -0.64
GKN2-201ENST00000328895 H3BM21 787 aa11.08□□□□□ -0.64
GKN2-201ENST00000328895 GTF2E1P29083 439 aaPredicted RBP11.08□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms