RNA–Protein interactions for RNA: ENST00000328354.10

CHEK2-201, Transcript of checkpoint kinase 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CHEK2, Length 1,867 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-201ENST00000328354 LMOD2Q6P5Q4 547 aa18.28■□□□□ 0.52
CHEK2-201ENST00000328354 CENPQQ7L2Z9 268 aaPredicted RBP18.28■□□□□ 0.52
CHEK2-201ENST00000328354 MCM10Q7L590 875 aa18.28■□□□□ 0.52
CHEK2-201ENST00000328354 RGPD5Q99666 1765 aa18.28■□□□□ 0.52
CHEK2-201ENST00000328354 DZIP1LQ8IYY4 767 aaKnown RBP18.27■□□□□ 0.52
CHEK2-201ENST00000328354 TSPYL6Q8N831 410 aa18.27■□□□□ 0.52
CHEK2-201ENST00000328354 TNNQ9UQP3 1299 aa18.27■□□□□ 0.52
CHEK2-201ENST00000328354 ABCC6O95255 1503 aa18.27■□□□□ 0.51
CHEK2-201ENST00000328354 NBPF6Q5VWK0 638 aa18.26■□□□□ 0.51
CHEK2-201ENST00000328354 ATF7IPQ6VMQ6 1270 aa18.26■□□□□ 0.51
CHEK2-201ENST00000328354 CLUAP1Q96AJ1 413 aa18.26■□□□□ 0.51
CHEK2-201ENST00000328354 NBPF4Q96M43 638 aa18.26■□□□□ 0.51
CHEK2-201ENST00000328354 KIAA0232Q92628 1395 aa18.26■□□□□ 0.51
CHEK2-201ENST00000328354 COL18A1P39060 1754 aa18.26■□□□□ 0.51
CHEK2-201ENST00000328354 RTF1Q92541 710 aaKnown RBP18.26■□□□□ 0.51
CHEK2-201ENST00000328354 IPO8O15397 1037 aaKnown RBP18.25■□□□□ 0.51
CHEK2-201ENST00000328354 TRIM27P14373 513 aa18.25■□□□□ 0.51
CHEK2-201ENST00000328354 MVPQ14764 893 aaKnown RBP18.25■□□□□ 0.51
CHEK2-201ENST00000328354 TWISTNBQ3B726 338 aaPredicted RBP18.25■□□□□ 0.51
CHEK2-201ENST00000328354 BRINP3Q76B58 766 aa18.25■□□□□ 0.51
CHEK2-201ENST00000328354 DDX17Q92841 729 aaKnown RBP18.25■□□□□ 0.51
CHEK2-201ENST00000328354 NOB1Q9ULX3 412 aaKnown RBP18.25■□□□□ 0.51
CHEK2-201ENST00000328354 LMO7Q8WWI1 1683 aa18.25■□□□□ 0.51
CHEK2-201ENST00000328354 SPATA31A3Q5VYP0 1347 aa18.25■□□□□ 0.51
CHEK2-201ENST00000328354 PIP4K2BP78356 416 aa18.24■□□□□ 0.51
CHEK2-201ENST00000328354 C8orf58Q8NAV2 365 aa18.24■□□□□ 0.51
CHEK2-201ENST00000328354 MAP3K5Q99683 1374 aa18.24■□□□□ 0.51
CHEK2-201ENST00000328354 GNAT3A8MTJ3 354 aa18.24■□□□□ 0.51
CHEK2-201ENST00000328354 TOM1O60784 492 aa18.23■□□□□ 0.51
CHEK2-201ENST00000328354 FTSJ3Q8IY81 847 aaKnown RBP18.23■□□□□ 0.51
CHEK2-201ENST00000328354 MRPL50Q8N5N7 158 aaKnown RBP18.23■□□□□ 0.51
CHEK2-201ENST00000328354 USHBP1Q8N6Y0 703 aa18.23■□□□□ 0.51
CHEK2-201ENST00000328354 ARHGAP45Q92619 1136 aa18.23■□□□□ 0.51
CHEK2-201ENST00000328354 HAP1P54257 671 aaPredicted RBP18.22■□□□□ 0.51
CHEK2-201ENST00000328354 ZBTB7CA1YPR0 619 aa18.22■□□□□ 0.51
CHEK2-201ENST00000328354 ANKRD24Q8TF21 1146 aa18.22■□□□□ 0.51
CHEK2-201ENST00000328354 RBM19Q9Y4C8 960 aaKnown RBP18.22■□□□□ 0.51
CHEK2-201ENST00000328354 SLAIN2Q9P270 581 aa18.21■□□□□ 0.51
CHEK2-201ENST00000328354 AXIN2Q9Y2T1 843 aa18.21■□□□□ 0.51
CHEK2-201ENST00000328354 FAM208AQ9UK61 1670 aaKnown RBP18.21■□□□□ 0.51
CHEK2-201ENST00000328354 TCERG1O14776 1098 aaKnown RBP18.2■□□□□ 0.5
CHEK2-201ENST00000328354 LRRC59Q96AG4 307 aaKnown RBP18.2■□□□□ 0.5
CHEK2-201ENST00000328354 SOS2Q07890 1332 aaPredicted RBP18.2■□□□□ 0.5
CHEK2-201ENST00000328354 BABAM1Q9NWV8 329 aa18.2■□□□□ 0.5
CHEK2-201ENST00000328354 ERBB3P21860 1342 aa18.19■□□□□ 0.5
CHEK2-201ENST00000328354 VIRMAQ69YN4 1812 aaKnown RBP18.19■□□□□ 0.5
CHEK2-201ENST00000328354 DDX19BQ9UMR2 479 aa18.19■□□□□ 0.5
CHEK2-201ENST00000328354 CPDO75976 1380 aa18.18■□□□□ 0.5
CHEK2-201ENST00000328354 CEMIPQ8WUJ3 1361 aa18.18■□□□□ 0.5
CHEK2-201ENST00000328354 ELL2O00472 640 aaPredicted RBP18.18■□□□□ 0.5
CHEK2-201ENST00000328354 NHSL1Q5SYE7 1610 aa18.18■□□□□ 0.5
CHEK2-201ENST00000328354 ZC3H6P61129 1189 aaKnown RBP18.18■□□□□ 0.5
CHEK2-201ENST00000328354 IL17REQ8NFR9 667 aa18.18■□□□□ 0.5
CHEK2-201ENST00000328354 CACNA1FO60840 1977 aa18.17■□□□□ 0.5
CHEK2-201ENST00000328354 TSPYL4Q9UJ04 414 aa18.17■□□□□ 0.5
CHEK2-201ENST00000328354 AMOTQ4VCS5 1084 aa18.16■□□□□ 0.5
CHEK2-201ENST00000328354 TMEM57Q8N5G2 664 aa18.16■□□□□ 0.5
CHEK2-201ENST00000328354 PLEKHG5O94827 1062 aa18.16■□□□□ 0.5
CHEK2-201ENST00000328354 IGHDP01880 384 aa18.16■□□□□ 0.5
CHEK2-201ENST00000328354 PLEKHO1Q53GL0 409 aaPredicted RBP18.16■□□□□ 0.5
CHEK2-201ENST00000328354 PCDHB15Q9Y5E8 787 aa18.16■□□□□ 0.5
CHEK2-201ENST00000328354 KRT24Q2M2I5 525 aa18.15■□□□□ 0.5
CHEK2-201ENST00000328354 PLEKHG2Q9H7P9 1386 aa18.15■□□□□ 0.5
CHEK2-201ENST00000328354 ABCC4O15439 1325 aa18.14■□□□□ 0.5
CHEK2-201ENST00000328354 ABCA3Q99758 1704 aa18.14■□□□□ 0.5
CHEK2-201ENST00000328354 OVOS2A0A0G2JMS6 1433 aa18.14■□□□□ 0.49
CHEK2-201ENST00000328354 AKAP4Q5JQC9 854 aa18.14■□□□□ 0.49
CHEK2-201ENST00000328354 ITPRIPQ8IWB1 547 aa18.14■□□□□ 0.49
CHEK2-201ENST00000328354 KDM3BQ7LBC6 1761 aa18.14■□□□□ 0.49
CHEK2-201ENST00000328354 SOS1Q07889 1333 aaPredicted RBP18.14■□□□□ 0.49
CHEK2-201ENST00000328354 ADAMTS7Q9UKP4 1686 aa18.14■□□□□ 0.49
CHEK2-201ENST00000328354 TAF7Q15545 349 aaPredicted RBP18.14■□□□□ 0.49
CHEK2-201ENST00000328354 CABLES1Q8TDN4 633 aa18.14■□□□□ 0.49
CHEK2-201ENST00000328354 API5Q9BZZ5 524 aaKnown RBP18.13■□□□□ 0.49
CHEK2-201ENST00000328354 MIS18AQ9NYP9 233 aa18.13■□□□□ 0.49
CHEK2-201ENST00000328354 ZNF530Q6P9A1 599 aaPredicted RBP18.12■□□□□ 0.49
CHEK2-201ENST00000328354 ZBTB40Q9NUA8 1239 aa18.12■□□□□ 0.49
CHEK2-201ENST00000328354 HSPA1LP34931 641 aa18.11■□□□□ 0.49
CHEK2-201ENST00000328354 CHMP4BQ9H444 224 aaKnown RBP18.1■□□□□ 0.49
CHEK2-201ENST00000328354 RWDD1Q9H446 243 aaPredicted RBP18.1■□□□□ 0.49
CHEK2-201ENST00000328354 ROBO1Q9Y6N7 1651 aa18.1■□□□□ 0.49
CHEK2-201ENST00000328354 RGS12O14924 1447 aa18.1■□□□□ 0.49
CHEK2-201ENST00000328354 SIPA1L3O60292 1781 aaPredicted RBP18.1■□□□□ 0.49
CHEK2-201ENST00000328354 PTPRCP08575 1304 aa18.09■□□□□ 0.49
CHEK2-201ENST00000328354 HDAC1Q13547 482 aaPredicted RBP18.08■□□□□ 0.49
CHEK2-201ENST00000328354 SKAP1Q86WV1 359 aa18.08■□□□□ 0.49
CHEK2-201ENST00000328354 LGR6Q9HBX8 967 aa18.08■□□□□ 0.49
CHEK2-201ENST00000328354 ZBTB7BO15156 539 aaPredicted RBP18.07■□□□□ 0.48
CHEK2-201ENST00000328354 C1orf141Q5JVX7 400 aa18.07■□□□□ 0.48
CHEK2-201ENST00000328354 PKD1L3Q7Z443 1732 aa18.07■□□□□ 0.48
CHEK2-201ENST00000328354 SCN11AQ9UI33 1791 aa18.07■□□□□ 0.48
CHEK2-201ENST00000328354 RNMTO43148 476 aaKnown RBP18.07■□□□□ 0.48
CHEK2-201ENST00000328354 CHRNA2Q15822 529 aa18.07■□□□□ 0.48
CHEK2-201ENST00000328354 NLRP2Q9NX02 1062 aa18.07■□□□□ 0.48
CHEK2-201ENST00000328354 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP18.07■□□□□ 0.482e-7■■□□□ 13.1
CHEK2-201ENST00000328354 INTS3Q68E01 1043 aaKnown RBP18.05■□□□□ 0.48
CHEK2-201ENST00000328354 RAPGEF4Q8WZA2 1011 aa18.05■□□□□ 0.48
CHEK2-201ENST00000328354 MEGF6O75095 1541 aa18.05■□□□□ 0.48
CHEK2-201ENST00000328354 SLC4A2P04920 1241 aa18.04■□□□□ 0.48
CHEK2-201ENST00000328354 HOXB7P09629 217 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms