RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 TNS3Q68CZ2 1445 aa13.04□□□□□ -0.32
ABCF1-201ENST00000326195 TSR2Q969E8 191 aaKnown RBP13.04□□□□□ -0.32
ABCF1-201ENST00000326195 BCL2L13Q9BXK5 485 aa13.04□□□□□ -0.32
ABCF1-201ENST00000326195 USP21Q9UK80 565 aa13.03□□□□□ -0.32
ABCF1-201ENST00000326195 FSD2A1L4K1 749 aa13.03□□□□□ -0.32
ABCF1-201ENST00000326195 RBM10P98175 930 aaKnown RBP13.03□□□□□ -0.32
ABCF1-201ENST00000326195 ZNF530Q6P9A1 599 aaPredicted RBP13.03□□□□□ -0.32
ABCF1-201ENST00000326195 ARHGEF10O15013 1369 aa13.02□□□□□ -0.32
ABCF1-201ENST00000326195 FLT4P35916 1363 aa13.02□□□□□ -0.32
ABCF1-201ENST00000326195 KNDC1Q76NI1 1749 aa13.02□□□□□ -0.32
ABCF1-201ENST00000326195 CENPQQ7L2Z9 268 aaPredicted RBP13.02□□□□□ -0.32
ABCF1-201ENST00000326195 NWD1Q149M9 1564 aa13.02□□□□□ -0.33
ABCF1-201ENST00000326195 RTF1Q92541 710 aaKnown RBP13.02□□□□□ -0.33
ABCF1-201ENST00000326195 RUNDC1Q96C34 613 aa13.02□□□□□ -0.33
ABCF1-201ENST00000326195 ANTXR1Q9H6X2 564 aa13.02□□□□□ -0.33
ABCF1-201ENST00000326195 MTHFSDQ2M296 383 aaKnown RBP13.01□□□□□ -0.33
ABCF1-201ENST00000326195 ACSBG1Q96GR2 724 aa13.01□□□□□ -0.33
ABCF1-201ENST00000326195 PRDM4Q9UKN5 801 aa13.01□□□□□ -0.33
ABCF1-201ENST00000326195 FMN2Q9NZ56 1722 aa13.01□□□□□ -0.33
ABCF1-201ENST00000326195 GOLGA6L3A6NEY3 463 aa13.01□□□□□ -0.33
ABCF1-201ENST00000326195 NSD2O96028 1365 aa13.01□□□□□ -0.33
ABCF1-201ENST00000326195 DCCP43146 1447 aa13.01□□□□□ -0.33
ABCF1-201ENST00000326195 EP400Q96L91 3159 aa13□□□□□ -0.33
ABCF1-201ENST00000326195 SPRYD3Q8NCJ5 442 aa13□□□□□ -0.33
ABCF1-201ENST00000326195 SPINK5Q9NQ38 1064 aaPredicted RBP13□□□□□ -0.33
ABCF1-201ENST00000326195 SSH2Q76I76 1423 aa13□□□□□ -0.33
ABCF1-201ENST00000326195 ZNF330Q9Y3S2 320 aaPredicted RBP13□□□□□ -0.33
ABCF1-201ENST00000326195 OVOS2A0A0J9YW53 1432 aa12.99□□□□□ -0.33
ABCF1-201ENST00000326195 OVOS2Q6IE36 1432 aa12.99□□□□□ -0.33
ABCF1-201ENST00000326195 TMPOP42166 694 aaKnown RBP12.99□□□□□ -0.33
ABCF1-201ENST00000326195 NCOA3Q9Y6Q9 1424 aa12.99□□□□□ -0.33
ABCF1-201ENST00000326195 SBNO1A3KN83 1393 aa12.99□□□□□ -0.33
ABCF1-201ENST00000326195 ERBB3P21860 1342 aa12.99□□□□□ -0.33
ABCF1-201ENST00000326195 TATP17735 454 aaPredicted RBP12.99□□□□□ -0.33
ABCF1-201ENST00000326195 PNPLA6Q8IY17 1366 aa12.99□□□□□ -0.33
ABCF1-201ENST00000326195 LGR6Q9HBX8 967 aa12.98□□□□□ -0.33
ABCF1-201ENST00000326195 ROBO1Q9Y6N7 1651 aa12.98□□□□□ -0.33
ABCF1-201ENST00000326195 AFF2P51816 1311 aa12.98□□□□□ -0.33
ABCF1-201ENST00000326195 KRT24Q2M2I5 525 aa12.98□□□□□ -0.33
ABCF1-201ENST00000326195 C1orf141Q5JVX7 400 aa12.98□□□□□ -0.33
ABCF1-201ENST00000326195 XIRP1Q702N8 1843 aaKnown RBP12.98□□□□□ -0.33
ABCF1-201ENST00000326195 ILDR1Q86SU0 546 aaPredicted RBP12.98□□□□□ -0.33
ABCF1-201ENST00000326195 QTRT2Q9H974 415 aaKnown RBP12.97□□□□□ -0.33
ABCF1-201ENST00000326195 FCHSD2O94868 740 aa12.97□□□□□ -0.33
ABCF1-201ENST00000326195 NPC1L1Q9UHC9 1359 aa12.97□□□□□ -0.33
ABCF1-201ENST00000326195 SLC39A6Q13433 755 aa12.97□□□□□ -0.33
ABCF1-201ENST00000326195 ADGRB2O60241 1585 aa12.96□□□□□ -0.33
ABCF1-201ENST00000326195 ESPNB1AK53 854 aa12.96□□□□□ -0.33
ABCF1-201ENST00000326195 NGEFQ8N5V2 710 aa12.96□□□□□ -0.33
ABCF1-201ENST00000326195 KCNQ4P56696 695 aa12.96□□□□□ -0.33
ABCF1-201ENST00000326195 PXDNQ92626 1479 aa12.96□□□□□ -0.33
ABCF1-201ENST00000326195 PTCD1O75127 700 aaKnown RBP12.96□□□□□ -0.34
ABCF1-201ENST00000326195 ITSN1Q15811 1721 aa12.95□□□□□ -0.34
ABCF1-201ENST00000326195 JCADQ9P266 1359 aa12.95□□□□□ -0.34
ABCF1-201ENST00000326195 IGHDP01880 384 aa12.94□□□□□ -0.34
ABCF1-201ENST00000326195 EIF2S2P20042 333 aaKnown RBP12.94□□□□□ -0.34
ABCF1-201ENST00000326195 PIP4K2AP48426 406 aaPredicted RBP12.94□□□□□ -0.34
ABCF1-201ENST00000326195 TEFQ10587 303 aa12.94□□□□□ -0.34
ABCF1-201ENST00000326195 WWC1Q8IX03 1113 aa12.94□□□□□ -0.34
ABCF1-201ENST00000326195 USP31Q70CQ4 1352 aa12.94□□□□□ -0.34
ABCF1-201ENST00000326195 PDCL3Q9H2J4 239 aa12.94□□□□□ -0.34
ABCF1-201ENST00000326195 MAP2P11137 1827 aaKnown RBP12.94□□□□□ -0.34
ABCF1-201ENST00000326195 AAMPQ13685 434 aa12.94□□□□□ -0.34
ABCF1-201ENST00000326195 PLEKHO1Q53GL0 409 aaPredicted RBP12.94□□□□□ -0.34
ABCF1-201ENST00000326195 GOLGB1Q14789 3259 aaKnown RBP12.94□□□□□ -0.34
ABCF1-201ENST00000326195 E9PSI1 815 aa12.93□□□□□ -0.34
ABCF1-201ENST00000326195 INSRP06213 1382 aa12.93□□□□□ -0.34
ABCF1-201ENST00000326195 EXOC5O00471 708 aa12.93□□□□□ -0.34
ABCF1-201ENST00000326195 IL2RBP14784 551 aa12.93□□□□□ -0.34
ABCF1-201ENST00000326195 NFE2L2Q16236 605 aa12.93□□□□□ -0.34
ABCF1-201ENST00000326195 PIK3C2AO00443 1686 aa12.92□□□□□ -0.34
ABCF1-201ENST00000326195 MCM4P33991 863 aa12.92□□□□□ -0.34
ABCF1-201ENST00000326195 ZCRB1Q8TBF4 217 aaKnown RBP12.92□□□□□ -0.34
ABCF1-201ENST00000326195 TBC1D2Q9BYX2 928 aa12.92□□□□□ -0.34
ABCF1-201ENST00000326195 NFATC2IPQ8NCF5 419 aa12.92□□□□□ -0.34
ABCF1-201ENST00000326195 FBXO41Q8TF61 875 aa12.92□□□□□ -0.34
ABCF1-201ENST00000326195 AATKQ6ZMQ8 1374 aa12.92□□□□□ -0.34
ABCF1-201ENST00000326195 KCNQ3O43525 872 aa12.92□□□□□ -0.34
ABCF1-201ENST00000326195 DDB1Q16531 1140 aa12.92□□□□□ -0.34
ABCF1-201ENST00000326195 CLUAP1Q96AJ1 413 aa12.92□□□□□ -0.34
ABCF1-201ENST00000326195 WDR17Q8IZU2 1322 aa12.92□□□□□ -0.34
ABCF1-201ENST00000326195 UNC5CLQ8IV45 518 aa12.91□□□□□ -0.34
ABCF1-201ENST00000326195 UPF2Q9HAU5 1272 aaKnown RBP12.91□□□□□ -0.34
ABCF1-201ENST00000326195 PLEKHF1Q96S99 279 aa12.91□□□□□ -0.34
ABCF1-201ENST00000326195 MYH16Q9H6N6 1097 aa12.91□□□□□ -0.34
ABCF1-201ENST00000326195 TSPYL4Q9UJ04 414 aa12.91□□□□□ -0.34
ABCF1-201ENST00000326195 TRAK2O60296 914 aa12.9□□□□□ -0.34
ABCF1-201ENST00000326195 DUSP27Q5VZP5 1158 aa12.9□□□□□ -0.34
ABCF1-201ENST00000326195 RBM42Q9BTD8 480 aaKnown RBP12.9□□□□□ -0.34
ABCF1-201ENST00000326195 GNAT3A8MTJ3 354 aa12.9□□□□□ -0.34
ABCF1-201ENST00000326195 ANXA1P04083 346 aa12.9□□□□□ -0.34
ABCF1-201ENST00000326195 CALD1Q05682 793 aaKnown RBP12.9□□□□□ -0.34
ABCF1-201ENST00000326195 GRPEL1Q9HAV7 217 aa12.9□□□□□ -0.34
ABCF1-201ENST00000326195 TRIM35Q9UPQ4 493 aa12.9□□□□□ -0.34
ABCF1-201ENST00000326195 EXOSC9Q06265 439 aaKnown RBP12.9□□□□□ -0.34
ABCF1-201ENST00000326195 BECN1Q14457 450 aa12.9□□□□□ -0.34
ABCF1-201ENST00000326195 MED1Q15648 1581 aaPredicted RBP12.89□□□□□ -0.35
ABCF1-201ENST00000326195 BCAR3O75815 825 aa12.89□□□□□ -0.35
ABCF1-201ENST00000326195 IGSF1Q8N6C5 1336 aa12.89□□□□□ -0.35
ABCF1-201ENST00000326195 KIAA1211Q6ZU35 1233 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms