RNA–Protein interactions for RNA: ENST00000322887.8

SEC24A-201, Transcript of SEC24 homolog A, COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC24A, Length 2,700 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC24A-201ENST00000322887 GAS2L2Q8NHY3 880 aa15.21■□□□□ 0.02
SEC24A-201ENST00000322887 NHSL1Q5SYE7 1610 aa15.21■□□□□ 0.02
SEC24A-201ENST00000322887 AHDC1Q5TGY3 1603 aaPredicted RBP15.21■□□□□ 0.02
SEC24A-201ENST00000322887 SBNO1A3KN83 1393 aa15.2■□□□□ 0.02
SEC24A-201ENST00000322887 PXDNQ92626 1479 aa15.2■□□□□ 0.02
SEC24A-201ENST00000322887 TMPOP42166 694 aaKnown RBP15.2■□□□□ 0.02
SEC24A-201ENST00000322887 PKP1Q13835 747 aa15.2■□□□□ 0.02
SEC24A-201ENST00000322887 ROBO1Q9Y6N7 1651 aa15.19■□□□□ 0.02
SEC24A-201ENST00000322887 PSME1Q06323 249 aa15.19■□□□□ 0.02
SEC24A-201ENST00000322887 ZBTB40Q9NUA8 1239 aa15.19■□□□□ 0.02
SEC24A-201ENST00000322887 SOS2Q07890 1332 aaPredicted RBP15.19■□□□□ 0.02
SEC24A-201ENST00000322887 SMC5Q8IY18 1101 aa15.19■□□□□ 0.02
SEC24A-201ENST00000322887 TRIM44Q96DX7 344 aaPredicted RBP15.19■□□□□ 0.02
SEC24A-201ENST00000322887 CFAP53Q96M91 514 aa15.19■□□□□ 0.02
SEC24A-201ENST00000322887 UBAP1LF5GYI3 381 aa15.18■□□□□ 0.02
SEC24A-201ENST00000322887 FOXO3O43524 673 aa15.18■□□□□ 0.02
SEC24A-201ENST00000322887 RIPK4P57078 832 aa15.18■□□□□ 0.02
SEC24A-201ENST00000322887 RBM10P98175 930 aaKnown RBP15.18■□□□□ 0.02
SEC24A-201ENST00000322887 TRPM3Q9HCF6 1732 aaPredicted RBP15.18■□□□□ 0.02
SEC24A-201ENST00000322887 TTC21BQ7Z4L5 1316 aa15.18■□□□□ 0.02
SEC24A-201ENST00000322887 DDX11L8A8MPP1 907 aa15.17■□□□□ 0.02
SEC24A-201ENST00000322887 NCLP19338 710 aaKnown RBP15.17■□□□□ 0.02
SEC24A-201ENST00000322887 HDAC1Q13547 482 aaPredicted RBP15.17■□□□□ 0.02
SEC24A-201ENST00000322887 DDX19BQ9UMR2 479 aa15.17■□□□□ 0.02
SEC24A-201ENST00000322887 FOXD4L5Q5VV16 416 aaPredicted RBP15.17■□□□□ 0.02
SEC24A-201ENST00000322887 CHD1LQ86WJ1 897 aa15.17■□□□□ 0.02
SEC24A-201ENST00000322887 FOXD4L4Q8WXT5 416 aaPredicted RBP15.17■□□□□ 0.02
SEC24A-201ENST00000322887 PLEKHF1Q96S99 279 aa15.17■□□□□ 0.02
SEC24A-201ENST00000322887 USP54Q70EL1 1684 aa15.17■□□□□ 0.02
SEC24A-201ENST00000322887 USP31Q70CQ4 1352 aa15.17■□□□□ 0.02
SEC24A-201ENST00000322887 APBB1O00213 710 aa15.16■□□□□ 0.02
SEC24A-201ENST00000322887 KRT28Q7Z3Y7 464 aa15.16■□□□□ 0.02
SEC24A-201ENST00000322887 TSPYL6Q8N831 410 aa15.16■□□□□ 0.02
SEC24A-201ENST00000322887 NUCB1Q02818 461 aa15.16■□□□□ 0.02
SEC24A-201ENST00000322887 TBC1D9Q6ZT07 1266 aa15.16■□□□□ 0.02
SEC24A-201ENST00000322887 RAB3GAP1Q15042 981 aa15.15■□□□□ 0.02
SEC24A-201ENST00000322887 NGEFQ8N5V2 710 aa15.15■□□□□ 0.02
SEC24A-201ENST00000322887 FYB1O15117 783 aa15.15■□□□□ 0.02
SEC24A-201ENST00000322887 RBM25P49756 843 aaKnown RBP15.15■□□□□ 0.02
SEC24A-201ENST00000322887 C16orf71Q8IYS4 520 aaPredicted RBP15.15■□□□□ 0.02
SEC24A-201ENST00000322887 HMOX1P09601 288 aa15.14■□□□□ 0.01
SEC24A-201ENST00000322887 CCDC27Q2M243 656 aa15.14■□□□□ 0.01
SEC24A-201ENST00000322887 ALS2Q96Q42 1657 aa15.14■□□□□ 0.01
SEC24A-201ENST00000322887 SIRT2Q8IXJ6 389 aa15.14■□□□□ 0.01
SEC24A-201ENST00000322887 KIF20BQ96Q89 1820 aa15.13■□□□□ 0.01
SEC24A-201ENST00000322887 TNS3Q68CZ2 1445 aa15.13■□□□□ 0.01
SEC24A-201ENST00000322887 RBM27Q9P2N5 1060 aaKnown RBP15.13■□□□□ 0.01
SEC24A-201ENST00000322887 ARHGEF10O15013 1369 aa15.13■□□□□ 0.01
SEC24A-201ENST00000322887 SPATA31A3Q5VYP0 1347 aa15.13■□□□□ 0.01
SEC24A-201ENST00000322887 KIAA1211Q6ZU35 1233 aa15.13■□□□□ 0.01
SEC24A-201ENST00000322887 ANKRD26Q9UPS8 1709 aa15.13■□□□□ 0.01
SEC24A-201ENST00000322887 OVOS2A0A0J9YW53 1432 aa15.13■□□□□ 0.01
SEC24A-201ENST00000322887 OVOS2Q6IE36 1432 aa15.13■□□□□ 0.01
SEC24A-201ENST00000322887 PIK3C2AO00443 1686 aa15.12■□□□□ 0.01
SEC24A-201ENST00000322887 OTUD7AQ8TE49 926 aaPredicted RBP15.12■□□□□ 0.01
SEC24A-201ENST00000322887 MCTP1Q6DN14 999 aa15.12■□□□□ 0.01
SEC24A-201ENST00000322887 MPNDQ8N594 471 aa15.12■□□□□ 0.01
SEC24A-201ENST00000322887 DDX49Q9Y6V7 483 aaKnown RBP15.12■□□□□ 0.01
SEC24A-201ENST00000322887 NASPP49321 788 aaPredicted RBP15.11■□□□□ 0.01
SEC24A-201ENST00000322887 TPRNQ4KMQ1 711 aa15.11■□□□□ 0.01
SEC24A-201ENST00000322887 MED1Q15648 1581 aaPredicted RBP15.11■□□□□ 0.01
SEC24A-201ENST00000322887 CAVIN1Q6NZI2 390 aaKnown RBP15.11■□□□□ 0.01
SEC24A-201ENST00000322887 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.11■□□□□ 0.01
SEC24A-201ENST00000322887 PHACTR3Q96KR7 559 aa15.1■□□□□ 0.01
SEC24A-201ENST00000322887 COL16A1Q07092 1604 aaPredicted RBP15.1■□□□□ 0.01
SEC24A-201ENST00000322887 K7ELQ4 463 aaPredicted RBP15.1■□□□□ 0.01
SEC24A-201ENST00000322887 LRRC59Q96AG4 307 aaKnown RBP15.1■□□□□ 0.01
SEC24A-201ENST00000322887 GBP4Q96PP9 640 aa15.1■□□□□ 0.01
SEC24A-201ENST00000322887 GSPT1P15170 499 aaKnown RBP15.09■□□□□ 0.01
SEC24A-201ENST00000322887 NME9Q86XW9 330 aa15.09■□□□□ 0.01
SEC24A-201ENST00000322887 ZGPATQ8N5A5 531 aaKnown RBP15.09■□□□□ 0.01
SEC24A-201ENST00000322887 ABTB2Q8N961 1025 aa15.09■□□□□ 0.01
SEC24A-201ENST00000322887 SNX21Q969T3 373 aa15.09■□□□□ 0.01
SEC24A-201ENST00000322887 COG3Q96JB2 828 aa15.09■□□□□ 0.01
SEC24A-201ENST00000322887 AATKQ6ZMQ8 1374 aa15.09■□□□□ 0.01
SEC24A-201ENST00000322887 BAG4O95429 457 aaKnown RBP15.08■□□□□ 0.01
SEC24A-201ENST00000322887 PIP4K2BP78356 416 aa15.08■□□□□ 0.01
SEC24A-201ENST00000322887 AAMPQ13685 434 aa15.08■□□□□ 0.01
SEC24A-201ENST00000322887 FOXD4L6Q3SYB3 417 aaPredicted RBP15.08■□□□□ 0.01
SEC24A-201ENST00000322887 FOXD4L3Q6VB84 417 aaPredicted RBP15.08■□□□□ 0.01
SEC24A-201ENST00000322887 DDX17Q92841 729 aaKnown RBP15.08■□□□□ 0.01
SEC24A-201ENST00000322887 PHLPP1O60346 1717 aa15.08■□□□□ 0
SEC24A-201ENST00000322887 RRP9O43818 475 aaKnown RBP15.08■□□□□ 0
SEC24A-201ENST00000322887 XPCQ01831 940 aaPredicted RBP15.08■□□□□ 0
SEC24A-201ENST00000322887 SLIT3O75094 1523 aa15.08■□□□□ 0
SEC24A-201ENST00000322887 ZBTB7BO15156 539 aaPredicted RBP15.08■□□□□ 0
SEC24A-201ENST00000322887 PRKAR2BP31323 418 aa15.08■□□□□ 0
SEC24A-201ENST00000322887 DCTN1Q14203 1278 aa15.08■□□□□ 0
SEC24A-201ENST00000322887 JARID2Q92833 1246 aaPredicted RBP15.08■□□□□ 0
SEC24A-201ENST00000322887 NSFL1CQ9UNZ2 370 aaKnown RBP15.08■□□□□ 0
SEC24A-201ENST00000322887 MARF1Q9Y4F3 1742 aaKnown RBP15.07■□□□□ 0
SEC24A-201ENST00000322887 SMARCA5O60264 1052 aaPredicted RBP15.07■□□□□ 0
SEC24A-201ENST00000322887 COL22A1Q8NFW1 1626 aaPredicted RBP15.07■□□□□ 0
SEC24A-201ENST00000322887 FAM83GA6ND36 823 aa15.07■□□□□ 0
SEC24A-201ENST00000322887 RBSNQ9H1K0 784 aa15.07■□□□□ 0
SEC24A-201ENST00000322887 NLRP6P59044 892 aa15.06■□□□□ 0
SEC24A-201ENST00000322887 KRT24Q2M2I5 525 aa15.06■□□□□ 0
SEC24A-201ENST00000322887 BMP2KLQ5H9B9 411 aa15.06■□□□□ 0
SEC24A-201ENST00000322887 R3HCC1Q9Y3T6 440 aaKnown RBP15.06■□□□□ 0
SEC24A-201ENST00000322887 GLIPR1L2Q4G1C9 344 aa15.05■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms